Contig 002738:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006C20Sequence463008901 (3)ref|XP_009603537.1|73.2PREDICTED: uncharacterized protein LOC104098494 [Nicotiana tomentosiformis]742002738 (3)ref|XP_004250001.1|263PREDICTED: uncharacterized protein LOC101253339 [Solanum lycopersicum]
JMFF049O20Sequence640008901 (3)ref|XP_009793129.1|172PREDICTED: uncharacterized protein LOC104240043 [Nicotiana sylvestris]573002738 (3)ref|XP_009793129.1|191PREDICTED: uncharacterized protein LOC104240043 [Nicotiana sylvestris]
JMFF051G02Sequence544008901 (3)ref|XP_009793129.1|114PREDICTED: uncharacterized protein LOC104240043 [Nicotiana sylvestris]434002738 (3)ref|XP_009793129.1|108PREDICTED: uncharacterized protein LOC104240043 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF006C20+                           TCCGAGGTTAACTCCGACGCCGCGGGAGCGGAGGACCAAGTCG
                      ____________________________________________________________
consensus                              TCCGAGGTTAACTCCGACGCCGCGGGAGCGGAGGACCAAGTCG
 
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rJMFF006C20+          ACATTCTATCCTCAGATTCATCCCTCCATAGCCCTCCTCCCAATTACAGAGTCACAGGAG
                      ____________________________________________________________
consensus             ACATTCTATCCTCAGATTCATCCCTCCATAGCCCTCCTCCCAATTACAGAGTCACAGGAG
 
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rJMFF006C20+          TTCCAGCGGATGGGAGATGTTTGTTTAGAGCCATAGCACACGTTGATTGCTTGAGGAATG
                      ____________________________________________________________
consensus             TTCCAGCGGATGGGAGATGTTTGTTTAGAGCCATAGCACACGTTGATTGCTTGAGGAATG
 
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rJMFF006C20+          GGGGAGAGGCTCCTAATGAGAATCGCCAGAGAGAATTGGCTGATGAATTAAGAGCTAAGG
rJMFF049O20+                                     AGAGAGAATTGGCTGATGAATTAAGAGCTAAGG
                      ____________________________________________________________
consensus             GGGGAGAGGCTCCTAATGAGAATCGCCAGAGAGAATTGGCTGATGAATTAAGAGCTAAGG
 
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rJMFF006C20+          TTGTTGATGAGTTGCTGCAAAGGCGAGAAGAAGCAGAATGGTTTATTGAAGGAGACTTTG
rJMFF049O20+          TTGTTGATGAGTTGCTGCAAAGGCGAGAAGAAGCAGAATGGTTTATTGAAGGAGACTTTG
                      ____________________________________________________________
consensus             TTGTTGATGAGTTGCTGCAAAGGCGAGAAGAAGCAGAATGGTTTATTGAAGGAGACTTTG
 
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rJMFF006C20+          ATGCATACGTAAAAACGATTGAGAAACCCTATGTATGGGGCGGAGAACCAGAGCTGCTAA
rJMFF049O20+          ATGCATACGTAAAAACGATTGAGAAACCCTATGTATGGGGCGGAGAACCAGAGCTGCTAA
rJMFF051G02+                                                        ACCAGAGCTGCTAA
                      ____________________________________________________________
consensus             ATGCATACGTAAAAACGATTGAGAAACCCTATGTATGGGGCGGAGAACCAGAGCTGCTAA
 
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rJMFF006C20+          TGGCTTCTCATGTACTCCAGACACCAATTTCAGTGTTCATGATACATATAAGTTCGGGTA
rJMFF049O20+          TGGCTTCTCATGTACTCCAGACACCAATTTCAGTGTTCATGATACATATAAGTTCGGGTA
rJMFF051G02+          TGGCTTCTCATGTACTCCAGACACCAATTTCAGTGTTCATGATACATATAAGTTCGGGTA
                      ____________________________________________________________
consensus             TGGCTTCTCATGTACTCCAGACACCAATTTCAGTGTTCATGATACATATAAGTTCGGGTA
 
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rJMFF006C20+          GCTTGATAAATATTTCAAATTATGGTGAAGAGTATCAGAAGGATGGAGAAAGTCCCATCA
rJMFF049O20+          GCTTGATAAATATTTCAAATTATGGTGAAGAGTATCAGAAGGATGGAGAAAGTCCCATCA
rJMFF051G02+          GCTTGATAAATATTTCAAATTATGGTGAAGAGTATCAGAAGGATGGAGAAAGTCCCATCA
                      ____________________________________________________________
consensus             GCTTGATAAATATTTCAAATTATGGTGAAGAGTATCAGAAGGATGGAGAAAGTCCCATCA
 
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rJMFF006C20+          ATGTTCTGTTTCATGGCTATGGTCATTATGACATAGTGGAGACTAATATTTTGGAAGAAT
rJMFF049O20+          ATGTTCTGTTTCATGGCTATGGTCATTATGACATAGTGGGGACTAATATTTTGGAAGAAT
rJMFF051G02+          ATGTTCTGTTTCATGGCTATGGTCATTATGACATAGTGGAGACTAATATTTTGGAAGAAT
                      ____________________________________________________________
consensus             ATGTTCTGTTTCATGGCTATGGTCATTATGACATAGTGGAGACTAATATTTTGGAAGAAT
 
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rJMFF006C20+          AATTGCAATCAAACATTTTATTTGCCCCTTCATTAAATGATCATTTTTTAAAGAGTTAGG
rJMFF049O20+          AATTGCAATCAAACATTTTATTTGCCCCTTCATTAAATGATCATTTTTTAAAGAGTTAGG
rJMFF051G02+          AATTGCAATCAAACATTTTATTTGCCCCTTCATTAAATGATCATTTTTTAAAGAGTTAGG
                      ____________________________________________________________
consensus             AATTGCAATCAAACATTTTATTTGCCCCTTCATTAAATGATCATTTTTTAAAGAGTTAGG
 
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rJMFF006C20+          TTTTTTGAAAATTTTTAGATTTGGTTCTTTTTTGAATTCTTACTTCAAAAACAAATTAGA
rJMFF049O20+          TTTTTTGAAAATTTTTAGATTTGGTTCTTTTTTGAATTCTTACTTCAAAAACAAATTAGA
rJMFF051G02+          TTTTTTGAAAATTTTTAGATTTGGTTCTTTTTTGAATTCTTACTTCAAAAACAAATTAGA
                      ____________________________________________________________
consensus             TTTTTTGAAAATTTTTAGATTTGGTTCTTTTTTGAATTCTTACTTCAAAAACAAATTAGA
 
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rJMFF006C20+          ACTTGAGTGGTTCTTCCTATAATGTTTTGTCAATAAAGCACCATTCTAAAAGCTTTATGG
rJMFF049O20+          ACTTGAGTGGTTCTTCCTATAATGTTTTGTCAATAAAGCCCCATTCTAAAAGCTTTATGG
rJMFF051G02+          ACTTGAGTGGTTCTTCCTATAATGTTTTGTCAATAAAGCACCATTTTAAAAGCTTTATGG
                      ____________________________________________________________
consensus             ACTTGAGTGGTTCTTCCTATAATGTTTTGTCAATAAAGCACCATTCTAAAAGCTTTATGG
 
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rJMFF006C20+          TTTTTGTAATTAAGAATGTGTTTTTGGATGGGAAGAAAA                     
rJMFF049O20+          TTTTTGTAATTAAGAATGTGTTTTTGGATGGGAAGAAAATGAAAGTCTTATTGAAGATTT
rJMFF051G02+          TTTTTGTAATTAAGAATGTGTTTTTGGATGGGAAGAAAATGAAAGTTTTATTGAAGATTT
                      ____________________________________________________________
consensus             TTTTTGTAATTAAGAATGTGTTTTTGGATGGGAAGAAAATGAAAGTTTTATTGAAGATTT