Contig 002729:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP018A02Sequence206002729 (25)
JMCP020D04Sequence249002729 (25)
JMFF002P19Sequence502000634 (24)gb|AGK27782.1|3e-75actin 7, partial [Dendrocalamus latiflorus]758002729 (25)tpg|DAA51050.1|2e-51TPA: putative actin family protein [Zea mays]
JMFF007B15Sequence145000634 (24)729002729 (25)dbj|BAB60900.1|1e-62actin [Ipomoea nil]
JMFF008H01Sequence154000634 (24)711002729 (25)gb|AFP43694.1|9e-111actin 2, partial [Eriobotrya japonica]
JMFF010B09Sequence470000634 (24)gb|AGK27782.1|2e-73actin 7, partial [Dendrocalamus latiflorus]295002729 (25)dbj|BAB60900.1|2e-24actin [Ipomoea nil]
JMFF016E21Sequence507000634 (24)gb|AGK27782.1|2e-81actin 7, partial [Dendrocalamus latiflorus]696002729 (25)gb|AFP43694.1|3e-119actin 2, partial [Eriobotrya japonica]
JMFF017E06Sequence512000634 (24)gb|AGK27782.1|1e-85actin 7, partial [Dendrocalamus latiflorus]738002729 (25)gb|AFP43694.1|5e-119actin 2, partial [Eriobotrya japonica]
JMFF022O22Sequence228000634 (24)gb|AGK27782.1|4e-13actin 7, partial [Dendrocalamus latiflorus]760002729 (25)tpg|DAA51050.1|9e-53TPA: putative actin family protein [Zea mays]
JMFF025N09Sequence116000634 (24)771002729 (25)gb|ADL59374.2|9e-148actin 4 [Ipomoea nil] gb|AFD62801.1| actin 4 [Ipomoea purpurea]
JMFF028O24Sequence435000634 (24)gb|AGK27782.1|6e-66actin 7, partial [Dendrocalamus latiflorus]661002729 (25)gb|AFP43694.1|1e-118actin 2, partial [Eriobotrya japonica]
JMFF029A15Sequence295000634 (24)emb|CDX79746.1|2e-19BnaC03g20820D [Brassica napus]761002729 (25)tpg|DAA51050.1|9e-53TPA: putative actin family protein [Zea mays]
JMFF032O01Sequence467000634 (24)gb|AGK27782.1|2e-73actin 7, partial [Dendrocalamus latiflorus]669002729 (25)gb|AFP43694.1|7e-121actin 2, partial [Eriobotrya japonica]
JMFF033K19Sequence470000634 (24)gb|AGK27782.1|2e-73actin 7, partial [Dendrocalamus latiflorus]264002729 (25)gb|AEL88913.1|5e-18actin [Halodule beaudettei]
JMFF033M18Sequence471000634 (24)gb|AGK27782.1|2e-75actin 7, partial [Dendrocalamus latiflorus]772002729 (25)gb|ADE05541.1|2e-72actin [Liriodendron tulipifera]
JMFF039O05Sequence518000634 (24)gb|AGK27782.1|3e-84actin 7, partial [Dendrocalamus latiflorus]717002729 (25)gb|ADL59374.2|8e-133actin 4 [Ipomoea nil] gb|AFD62801.1| actin 4 [Ipomoea purpurea]
JMFF043J04Sequence636000634 (24)gb|AGK27782.1|4e-117actin 7, partial [Dendrocalamus latiflorus]601002729 (25)gb|ADE05541.1|4e-93actin [Liriodendron tulipifera]
JMFF045D18Sequence644000634 (24)ref|XP_004156708.1|4e-130PREDICTED: actin-97-like [Cucumis sativus]625002729 (25)gb|ADE05541.1|1e-96actin [Liriodendron tulipifera]
JMFF045J16Sequence639000634 (24)gb|AGK27782.1|2e-119actin 7, partial [Dendrocalamus latiflorus]571002729 (25)tpg|DAA51050.1|4e-72TPA: putative actin family protein [Zea mays]
JMFF046E07Sequence636000634 (24)gb|ADL59374.2|2e-121actin 4 [Ipomoea nil] gb|AFD62801.1| actin 4 [Ipomoea purpurea]503002729 (25)gb|AAW83504.1|1e-04actin [Ipomoea batatas]
JMFF049O23Sequence568000634 (24)gb|AGK27782.1|9e-76actin 7, partial [Dendrocalamus latiflorus]422002729 (25)
JMFN031M22Sequence534002729 (25)gb|ADE05541.1|1e-87actin [Liriodendron tulipifera]
JMSF009L18Sequence338000634 (24)gb|AAS78671.1|2e-33actin [Capsicum annuum]743002729 (25)gb|ADL59374.2|2e-149actin 4 [Ipomoea nil] gb|AFD62801.1| actin 4 [Ipomoea purpurea]
JMSF033M14Sequence146002729 (25)
JMSF049I04Sequence674000634 (24)emb|CAJ42300.1|4e-102actin 1 [Plantago major]717002729 (25)gb|ADL59374.2|2e-137actin 4 [Ipomoea nil] gb|AFD62801.1| actin 4 [Ipomoea purpurea]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF009L18+ TA
                      ____________________________________________________________
consensus TA
 
. : . : . : . : . : . :
rJMSF009L18+ TGAAGGGTATGCCCTCCCACATGCTATCCTTCGTCTTGATTTGGCTGGTCGTGACCTCAC
rJMFF025N09+ ATCCTTCGTCTTGATTTGGCTGGTCGTGACCTCAC
rJMFF039O05+ C
                      ____________________________________________________________
consensus TGAAGGGTATGCCCTCCCACATGCTATCCTTCGTCTTGATTTGGCTGGTCGTGACCTCAC
 
. : . : . : . : . : . :
rJMSF009L18+ TGATCATTTGATGAAGATCCTCACAGAGCGTGGTTACTCTTTCACAACCTCAGCTGAACG
rJMFF025N09+ TGATCATTTGATGAAGATCCTCACAGAGCGTGGTTACTCTTTCACAACCTCAGCTGAACG
rJMSF049I04+ GATCATTTGATGAAGATCCTCACAGAGCGTGGTTACTCTTTCACAACCTCAGCTGAACG
rJMFF039O05+ TGATCATTTGATGAAGATCCTCACAGAGCGTGGTTACTCTTTCACAACCTCAGCTGAACG
rJMFF032O01+ TCAGCTGAACG
rJMFF028O24+ CG
rJMFF016E21+ AACG
rJMFF017E06+ ACG
                      ____________________________________________________________
consensus TGATCATTTGATGAAGATCCTCACAGAGCGTGGTTACTCTTTCACAACCTCAGCTGAACG
 
. : . : . : . : . : . :
rJMSF009L18+ GGAAATTGTGAGGGACATGAAAGAAAAACTTGCTTACATAGCTCTTGACTATGAGCAGGA
rJMFF025N09+ GGAAATTGTGAGGGACATGAAAGAAAAACTTGCTTACATAGCTCTTGACTATGAGCAGGA
rJMSF049I04+ GGAAATTGTGAGGGACATGAAAGAAAAACTTGCTTACATAGCTCTTGACTATGAGCAGGA
rJMFF039O05+ GGAAATTGTGAGGGACATGAAAGAAAAACTTGCTTACATAGCTCTTGACTATGAGCAGGA
rJMFF032O01+ GGAAATTGTGAGGGACATGAAAGAAAAACTTGCTTACATAGCTCTTGACTATGAGCAGGA
rJMFF028O24+ GGAAATTGTGAGGGACATGAAAGAAAAACTTGCTTACATAGCTCTTGACTATGAGCAGGA
rJMFF016E21+ GGAAATTGTGAGGGACATGAAAGAAAAACTTGCTTACATAGCTCTTGACTATGAGCAGGA
rJMFF017E06+ GGAAATTGTGAGGGACATGAAAGAAAAACTTGCTTACATAGCTCTTGACTATGAGCAGGA
rJMFF008H01+ AAAACTTGCTTACATAGCTCTTGACTATGAGCAGGA
                      ____________________________________________________________
consensus GGAAATTGTGAGGGACATGAAAGAAAAACTTGCTTACATAGCTCTTGACTATGAGCAGGA
 
. : . : . : . : . : . :
rJMSF009L18+ GCTAGAGACCTCAAAGACTAGCTCTGCTGTAGAGAAGAGTTATGAACTTCCTGATGGGCA
rJMFF025N09+ GCTAGAGACCTCAAAGACTAGCTCTGCTGTAGAGAAGAGTTATGAACTTCCTGATGGGCA
rJMSF049I04+ GCTAGAGACCTCAAAGACTAGCTCTGCTGTAGAGAAGAGTTATGAACTTCCTGATGGGCA
rJMFF039O05+ GCTAGAGACCTCAAAGACTAGCTCTGCTGTAGAGAAGAGTTATGAACTTCCTGATGGGCA
rJMFF032O01+ GCTAGAGACCTCAAAGACTAGCTCTGCTGTAGAGAAGAGTTATGAACTTCCTGATGGGCA
rJMFF028O24+ GCTAGAGACCTCAAAGACTAGCTCTGCTGTAGAGAAGAGTTATGAACTTCCTGATGGGCA
rJMFF016E21+ GCTAGAGACCTCAAAGACTAGCTCTGCTGTAGAGAAGAGTTATGAACTTCCTGATGGGCA
rJMFF045D18+ TAGAGAAGAGTTATGAACTTCCTGATGGGCA
rJMFF017E06+ GCTAGAGACCTCAAAGACTAGCTCTGCTGTAGAGAAGAGTTATGAACTTCCTGATGGGCA
rJMFF043J04+ TGAACTTCCTGATGGGCA
rJMFF008H01+ GCTAGAGACCTCAAAGACTAGCTCTGCTGTAGAGAAGAGTTATGAACTTCNTGATGGGCA
                      ____________________________________________________________
consensus GCTAGAGACCTCAAAGACTAGCTCTGCTGTAGAGAAGAGTTATGAACTTCCTGATGGGCA
 
. : . : . : . : . : . :
rJMSF009L18+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMFF025N09+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMSF049I04+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMFF039O05+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMFF032O01+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMFF028O24+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
JMFN031M22- CACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMFF016E21+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMFF045D18+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMFF017E06+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMFF043J04+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMFF008H01+ AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
rJMFF033M18+ TTCATT
                      ____________________________________________________________
consensus AGTAATCACCATTGGCGCTGAGCGTTTCCGATGCCCAGAGGTTCTCTTCCAGCCTTCATT
 
. : . : . : . : . : . :
rJMSF009L18+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF025N09+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMSF049I04+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF039O05+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF032O01+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF028O24+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
JMFN031M22- GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF016E21+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF045D18+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF017E06+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF043J04+ GGTCGGATTGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF008H01+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF007B15+ CATACAACTCTATCATGAAGTGTGA
rJMFF045J16+ TCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF033M18+ GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF022O22+ GGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF029A15+ GGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
rJMFF002P19+ TGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
                      ____________________________________________________________
consensus GGTCGGAATGGAAGCAGCAGGAATCCACGAGACAACATACAACTCTATCATGAAGTGTGA
 
. : . : . : . : . : . :
rJMSF009L18+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF025N09+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMSF049I04+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF039O05+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF032O01+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF028O24+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
JMFN031M22- TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF016E21+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF045D18+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF017E06+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF043J04+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF008H01+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF007B15+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF045J16+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF033M18+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF022O22+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF029A15+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
rJMFF002P19+ TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
                      ____________________________________________________________
consensus TGTAGATATCCGAAAAGACTTGTATGGAAACATAGTACTTAGTGGCGGGACTACCATGTT
 
. : . : . : . : . : . :
rJMSF009L18+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF025N09+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMSF049I04+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF039O05+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF032O01+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF028O24+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
JMFN031M22- -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF016E21+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF045D18+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF017E06+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF043J04+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF008H01+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF007B15+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF045J16+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF033M18+ -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF022O22+ CCCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF010B09+ GA
rJMFF029A15+ CCCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
rJMFF002P19+ CCCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
                      ____________________________________________________________
consensus -CCCCGGTATTGCGGATAGAATGAGCAAGGAAATAACAGCGTTGGCTCCAAGCAGCATGA
 
. : . : . : . : . : . :
rJMSF009L18+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF025N09+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMSF049I04+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF039O05+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF032O01+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF028O24+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTTTCTGGATTGGAGGCTCCATAT
JMFN031M22- AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF016E21+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF045D18+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF017E06+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF043J04+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF008H01+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF007B15+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF045J16+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF033M18+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF022O22+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF010B09+ AGATTAANGTTGTAGCNCCACCTGAAAGGAAATNCAGTGTCTGGATTGGAGGCTCCATAN
rJMFF033K19+ GTCTGGATTGGAGGCTCCATAT
rJMFF029A15+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
rJMFF002P19+ AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
                      ____________________________________________________________
consensus AGATTAAGGTTGTAGCACCACCTGAAAGGAAATACAGTGTCTGGATTGGAGGCTCCATAT
 
. : . : . : . : . : . :
rJMSF009L18+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF025N09+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMSF049I04+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF039O05+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF032O01+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF028O24+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
JMFN031M22- TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF016E21+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF045D18+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF017E06+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF043J04+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF008H01+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF007B15+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF045J16+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF033M18+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF046E07+ TGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF022O22+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF010B09+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF033K19+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMCP020D04- ATGATGAGTCCG
rJMCP018A02- ATGATGAGTCCG
rJMFF029A15+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
rJMFF002P19+ TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
                      ____________________________________________________________
consensus TGGCTTCCCTCAGCACATTCCAACAGATGTGGATTGCCAAGGCAGAGTATGATGAGTCCG
 
. : . : . : . : . : . :
rJMSF009L18+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF025N09+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMSF049I04+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF039O05+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF032O01+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF028O24+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
JMFN031M22- GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF016E21+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF045D18+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF017E06+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF043J04+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF008H01+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF007B15+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF045J16+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF033M18+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF046E07+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF022O22+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF010B09+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF033K19+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMCP020D04- GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMCP018A02- GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
JMSF033M14- GC
rJMFF029A15+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF002P19+ GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
rJMFF049O23+ GC
                      ____________________________________________________________
consensus GCCCGTCAATTGTGCACAGGAAGTGCTTCTAATTTTCCAAGATCCAAGAATGCTCGTGGC
 
. : . : . : . : . : . :
rJMSF009L18+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF025N09+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMSF049I04+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCT--TATGTTCTAGCT
rJMFF039O05+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF032O01+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF028O24+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
JMFN031M22- ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF016E21+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF045D18+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF017E06+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF043J04+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF008H01+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF007B15+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF045J16+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF033M18+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF046E07+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF022O22+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF010B09+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF033K19+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMCP020D04- ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMCP018A02- ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
JMSF033M14- ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF029A15+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF002P19+ ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
rJMFF049O23+ ATACAAGTATTCTCTCCTACTTGGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
                      ____________________________________________________________
consensus ATACAAGTATTCTCTCCTACTTTGTCATAAACAAAATTTGCGACCTTATATGTTCTAGCT
 
. : . : . : . : . : . :
rJMSF009L18+ TTTATTTGTATTTGTTGTTGTC
rJMFF025N09+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTT
rJMSF049I04+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGAT
rJMFF039O05+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTA
rJMFF032O01+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTA
rJMFF028O24+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
JMFN031M22- TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF016E21+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF045D18+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF017E06+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF043J04+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF008H01+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF007B15+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF045J16+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF033M18+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF046E07+ TTTATTTGTATTTGTTGTTGTCATGTGGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF022O22+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF010B09+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGA
rJMFF033K19+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMCP020D04- TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMCP018A02- TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
JMSF033M14- TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF029A15+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF002P19+ TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
rJMFF049O23+ TTTATTTGTATTTGTTGTTGTCATGTGGGATGTATGATTTGACAATGCAAGGAGTTATAT
                      ____________________________________________________________
consensus TTTATTTGTATTTGTTGTTGTCATGTTGGATGTATGATTTGACAATGCAAGGAGTTATAT
 
. : . : . : . : . : . :
JMFN031M22- T
rJMFF016E21+ TATGATGATGTTGCACAATTCTTTCCATTTTAT
rJMFF045D18+ TAAAAAAAAAAAAAGAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
rJMFF017E06+ TATGATGATGTTGCACAATTCTTTCTATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
rJMFF043J04+ TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCT
rJMFF008H01+ TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
rJMFF007B15+ TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
rJMFF045J16+ TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
rJMFF033M18+ TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
rJMFF046E07+ TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
rJMFF022O22+ TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
rJMFF033K19+ TA
rJMCP020D04- TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGT
rJMCP018A02- TATGATGATGTT
JMSF033M14- TATGATGATGTTGCA
rJMFF029A15+ TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
rJMFF002P19+ TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
rJMFF049O23+ TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
                      ____________________________________________________________
consensus TATGATGATGTTGCACAATTCTTTCCATTTTATTCCATCTTTCTAAATCTCAGTTGAAAT
 
. : . : . : . : . : . :
rJMFF017E06+ GCAATGCAATGCAAGA
rJMFF008H01+ GCAATGCAATGCAAGA
rJMFF007B15+ GCAATGCAATGCAAGAATCTCTTCTAGCAGATAGTTTTCCAGTAACAGCTGATTTACATT
rJMFF045J16+ GCAATGCAA
rJMFF033M18+ GCAATGCAATGCAAGAATCTCTTCTAGCAGATAGTTTTCCAGTAACAGCTGATTTACATT
rJMFF046E07+ GCAATGCAATGCAAGAATCTCTTCTAGCAGATAGTTTTCCAGTAACAGCTGATTTACATT
rJMFF022O22+ GCAATGCAATGCAAGAATCTCTTCTAGCAGATAGTTTTCCAGTAACAGCTGATTTACATT
rJMFF029A15+ GCAATGCAATGCAAGAATCTCTTCTAGCAGATAGTTTTCCAGTAACAGCTGATTTACATT
rJMFF002P19+ GCAATGCAATGCAAGAATCTCTTCTAGCAGATAGTTTTCCAGTAACAGCTGATTTACATT
rJMFF049O23+ GCATTGCAATGCAAGAATCTCTTCTAGCAGATAGTTTTCCAGTAACAGCTGATTTACATT
                      ____________________________________________________________
consensus GCAATGCAATGCAAGAATCTCTTCTAGCAGATAGTTTTCCAGTAACAGCTGATTTACATT
 
. : . : . : . : . : . :
rJMFF007B15+ CCATGGTCAATTCTTTGATTGTGTTGTTATACATATATAAGAGCAGGTGTCAAAGAAAGT
rJMFF033M18+ CCATGGTCAATTCTTTGATTGTGTTGTTATACATATATAAGAGCAGGTGTCAAAGAAAGT
rJMFF046E07+ CCATGGTCAATTCTTTGATTGTGTTGTTATACATATATAAGAGCAGGTGTCAAAGAAAGT
rJMFF022O22+ CCATGGTCAATTCTTTGATTGTGTTGTTATACATATATAAGAGCAGGTGTCAAAGAAAGT
rJMFF029A15+ CCATGGTCAATTCTTTGATTGTGTTGTTATACATATATAAGAGCAGGTGTCAAAGAAAGT
rJMFF002P19+ CCATGGTCAATTCTTTGATTGTGTTGTTATACATATATAAGAGCAGGTGTCAAAGAAAGT
rJMFF049O23+ CCATGGTCAATTCTTTGATTGTGTTGTTATACATATATAAGAGCAGGTGTCAAAGAAAGT
                      ____________________________________________________________
consensus CCATGGTCAATTCTTTGATTGTGTTGTTATACATATATAAGAGCAGGTGTCAAAGAAAGT
 
. : . : . : . : . : . :
rJMFF007B15+ GTATGCATGTGGAGTATAAATGAAGGTTCTCTATGAGAATTAATATGTAGCTTTGAAGAT
rJMFF033M18+ GTATGCATGTGGAGTATAAATGAAGGTTCTCTATGAGAATTAATATGTAGCTTTGAAGAT
rJMFF046E07+ GTATGCATGTGGAGTATAAATGAAGGTTCTCTATGAGAATTAATATGTAGCTTTGAAGAT
rJMFF022O22+ GTATGCATGTGGAGTATAAATGAAGGTTCTCTATGAGAATTAATATGTAGCTTTGAAGAT
rJMFF029A15+ GTATGCATGTGGAGTATAAATGAAGGTTCTCTATGAGAATTAATATGTAGCTTTGAAGAT
rJMFF002P19+ GTATGCATGTGGAGTATAAATGAAGGTTCTCTATGAGAATTAATATGTAGCTTTGAAGAT
rJMFF049O23+ GTATGCATGTGGAGTATAAATGAAGGTTCTCTATGAGAATTAATATGTAGCTTTGAAGAT
                      ____________________________________________________________
consensus GTATGCATGTGGAGTATAAATGAAGGTTCTCTATGAGAATTAATATGTAGCTTTGAAGAT
 
. : . : . : . : . : . :
rJMFF007B15+ TGGATTGTATGATGCTAGCTGTAACCAATCATT--CCTAAAGAAGAA
rJMFF033M18+ TGGATTGTATGATGCTAGCTGTAACCAATCATT--CCTAAAGAAGAA
rJMFF046E07+ TGGATTGTATGATGCTAGCTGTAACCAATCATT
rJMFF022O22+ TGGATTGTATGATGCTAGCTGTAACCAATCATT--CCTAAAGAAGA
rJMFF029A15+ TGGATTGTATGATGCTAGCTGTAACCAATCATT--CCTAAAGAAGAA
rJMFF002P19+ TGGATTGTATGATGCTAGCTGTAACCAATCATT--CCTAAAGAAGAA
rJMFF049O23+ TGGATTGTATGATGCTAGCTGTAACCAATCATTTCCTTAAAGAAGAATTATCTACCACCC
                      ____________________________________________________________
consensus TGGATTGTATGATGCTAGCTGTAACCAATCATT--CCTAAAGAAGAATTATCTACCACCC