Contig 002715:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003O08Sequence539010673 (6)ref|XP_006351772.1|159PREDICTED: uncharacterized protein LOC102578792 [Solanum tuberosum]733002715 (5)ref|XP_009615990.1|171PREDICTED: uncharacterized protein LOC104108615 [Nicotiana tomentosiformis]
JMFF048D07Sequence388010673 (6)ref|XP_006351772.1|95.5PREDICTED: uncharacterized protein LOC102578792 [Solanum tuberosum]244002715 (5)
JMFN041E14Sequence621002715 (5)ref|XP_009790037.1|96.7PREDICTED: uncharacterized protein LOC104237564 [Nicotiana sylvestris]
JMSF020G13Sequence671010673 (6)ref|XP_006351772.1|159PREDICTED: uncharacterized protein LOC102578792 [Solanum tuberosum]771002715 (5)ref|XP_006351772.1|196PREDICTED: uncharacterized protein LOC102578792 [Solanum tuberosum]
JMSF026P23Sequence611010673 (6)ref|XP_006351772.1|142PREDICTED: uncharacterized protein LOC102578792 [Solanum tuberosum]689002715 (5)ref|XP_009790037.1|165PREDICTED: uncharacterized protein LOC104237564 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN041E14- GATC
rJMSF020G13+ TCGGNTGAGCCGCGGCTTCAAGGCGCGTTGGTCNAAGTCTCAGCATTCTTATTGGATC
rJMFF003O08+ GATC
                      ____________________________________________________________
consensus TCGGNTGAGCCGCGGCTTCAAGGCGCGTTGGTCNAAGTCTCAGCATTCTTATTGGATC
 
. : . : . : . : . : . :
rJMSF026P23+ CAGATGAAGAAAGCATGAAATATGATGAACTTAGAC
JMFN041E14- AAGCAAGACAGTTGTGGAAAGAGGCAGATGAAGAAAGCATGAAATATGATGAACTAAGAC
rJMSF020G13+ AAGCAAGACAGTTGTGGAAAGAGGCAGATGAAGAAAGCATGAAATATGATGAACTAAGAC
rJMFF003O08+ AAGCAAGACAGTTGTGGAAAGAGGCAGATGAAGAAAGCATGAAATATGATGAACTAAGAC
                      ____________________________________________________________
consensus AAGCAAGACAGTTGTGGAAAGAGGCAGATGAAGAAAGCATGAAATATGATGAACTAAGAC
 
. : . : . : . : . : . :
rJMSF026P23+ AAACAAACATGAATATGCTGGTGTCATGGCTGCCACTGCTGTGCCGCGCAAGCAATGGCA
JMFN041E14- AAACAAACATGAATATGCTGGTGTCATGGCTGCCACTGCTGTGCCGCGCAAGCAATGGCA
rJMSF020G13+ AAACAAACATGAATATGCTGGTGTCATGGCTGCCACTGCTGTGCCGCGCAAGCAATGGCA
rJMFF003O08+ AAACAAACATGAATATGCTGGTGTCATGGCTGCCACTGCTGTGCCGCGCAAGCAATGGCA
                      ____________________________________________________________
consensus AAACAAACATGAATATGCTGGTGTCATGGCTGCCACTGCTGTGCCGCGCAAGCAATGGCA
 
. : . : . : . : . : . :
rJMSF026P23+ CAGACACTCCGG--TTTTGAGCATCAACAAGAGAGCGGAGCTAGAGAGAACGTTGGAGCT
JMFN041E14- CAGACACTCCGGGATTTAGAGCATCAACAACAGAGCGGAGCTAGAGAGAACGTTGGAGCT
rJMSF020G13+ CAGACACTCCGG--TTTTGAGCATCAACAAGAGAGCGGAGCTAGAGAGAACGTTGGAGCT
rJMFF003O08+ CAGACACTCCGG--TTTTGAGCATCAACAAGAGAGCGGAGCTAGAGAGAACGTTGGAGCT
                      ____________________________________________________________
consensus CAGACACTCCGG--TTTTGAGCATCAACAAGAGAGCGGAGCTAGAGAGAACGTTGGAGCT
 
. : . : . : . : . : . :
rJMSF026P23+ GATAATAAACACGTTGGATGAAGAAGAGCAAGAAAAAGTGCTGTCCCTTTGGCTCCAGCA
JMFN041E14- GATAATAAACACGTTGGATGAAGAATAGCAAGAAAAAATGCTGTCCCTTTGGCTCCAGAA
rJMSF020G13+ GATAATAAACACGTTGGATGAAGAAGAGCAAGAAAAAGTGCTGTCCCTTTGGCTCCAGCA
rJMFF003O08+ GATAATAAACACGTTGGATGAAGAAGAGCAAGAAAAAGTGCTGTCCCTTTGGCTCCAGCA
                      ____________________________________________________________
consensus GATAATAAACACGTTGGATGAAGAAGAGCAAGAAAAAGTGCTGTCCCTTTGGCTCCAGCA
 
. : . : . : . : . : . :
rJMSF026P23+ CTTCACTTATTGCCCGTCATCCGACTGGCCAAACCTCCATGATATTTACACTCGTTGGTG
JMFN041E14- CTTCACTAATTGCCCGTCATCCGACTGGCCAAACCTCCATGATATTTACACTCGTTGGTG
rJMSF020G13+ CTTCACTTATTGCCCGTCATCCGACTGGCCAAACCTCCATGATATTTACACTCGTTGGTG
rJMFF003O08+ CTTCACTTATTGCCCGTCATCCGACTGGCCAAACCTCCATGATATTTACACTCGTTGGTG
                      ____________________________________________________________
consensus CTTCACTTATTGCCCGTCATCCGACTGGCCAAACCTCCATGATATTTACACTCGTTGGTG
 
. : . : . : . : . : . :
rJMSF026P23+ CACTGCTTCTCGCACCTCCCTCTTGCTCCTCAACTGAAACACCGGTACTGGTACTATACA
JMFN041E14- CACTGCTTCACGCACCTCCCTCTTGATCCTCAACTGAAACACCGGTACTGGTACTATACA
rJMSF020G13+ CACTGCTTCTCGCACCTCCCTCTTGCTCCTCAACTGAAACACCGGTACTGGTACTATACA
rJMFF003O08+ CACTGCTTCTCGCACCTCCCTCTTGCTCCTCAACTGAAACACCGGTACTGGTACTATACA
                      ____________________________________________________________
consensus CACTGCTTCTCGCACCTCCCTCTTGCTCCTCAACTGAAACACCGGTACTGGTACTATACA
 
. : . : . : . : . : . :
rJMSF026P23+ TTCTTGGTTCAAATTGATGCTTTAGTTAACTCCATTTTACTGCCTGAGTTCCTATGGAGT
JMFN041E14- TTCTTGGTTCAAATTGATGCTTTAATTAACTCCATTTTACTGCCTGAGTTCCTATGGAGT
rJMSF020G13+ TTCTTGGTTCAAATTGATGCTTTAGTTAACTCCATTTTACTGCCTGAGTTCCTATGGAGT
rJMFF003O08+ TTCTTGGTTCAAATTGATGCTTTAGTTAACTCCATTTTACTGCCTGAGTTCCTATGGAGT
                      ____________________________________________________________
consensus TTCTTGGTTCAAATTGATGCTTTAGTTAACTCCATTTTACTGCCTGAGTTCCTATGGAGT
 
. : . : . : . : . : . :
rJMSF026P23+ CTTAAATCTTTGAAGATGAGAGTTGAAGCTCCTGTGAATACCAAAGCTCCATTACGCCCA
JMFN041E14- CTTAAATCTTTGAAGATGATAGTTGAAGCTCCTGTGAATACCAAAGCTCCATTACGCCCA
rJMSF020G13+ CTTAAATCTTTGAAGATGAGAGTTGAAGCTCCTGTGAATACCAAAGCTCCATTACGCCCA
rJMFF003O08+ CTTAAATCTTTGAAGATGAGAGTTGAAGCTCCTGTGAATACCAAAGCTCCATTACGCCCA
                      ____________________________________________________________
consensus CTTAAATCTTTGAAGATGAGAGTTGAAGCTCCTGTGAATACCAAAGCTCCATTACGCCCA
 
. : . : . : . : . : . :
rJMSF026P23+ AATAGGCATAAAATGATCGAGATTCCATAGTGAACAACCTCGTGGAAGACTAGTACTACC
JMFN041E14- AATATGCATAAAATGATCGAGATTCCATATTGAACAACCTCGAGGAAGACTAGTACTACC
rJMSF020G13+ AATAGGCATAAAATGATCGAGATTCCATAGTGAACAACCTCGTGGAAGACTAGTACTACC
rJMFF003O08+ AATAGGCATAAAATGATCGAGATTCCATAGTGAACAACCTCGTGGAAGACTAGTACTACC
rJMFF048D07+ TACC
                      ____________________________________________________________
consensus AATAGGCATAAAATGATCGAGATTCCATAGTGAACAACCTCGTGGAAGACTAGTACTACC
 
. : . : . : . : . : . :
rJMSF026P23+ CGAGCTTCATTTCTACTAGTTTGGACCTGTTCTTCACCGATTAGGTAGCACAGGGACTTT
JMFN041E14- CGAGCTTCATTTCTACTAGTTTGGACCTGATCTTC-CCGATTATGTAGCACAGGGACTTT
rJMSF020G13+ CGAGCTTCATTTCTACTAGTTTGGACCTGTTCTTCACCGATTAGGTAGCACAGGGACTTT
rJMFF003O08+ CGAGCTTCATTTCTACTAGTTTGGACCTGTTCTTCACCGATTAGGTAGCACAGGGACTTT
rJMFF048D07+ CGAGCTTCATTTCTACTAGTTTGGACCTGTTCTTCACCGATTAGGTAGCACAGGGACTTT
                      ____________________________________________________________
consensus CGAGCTTCATTTCTACTAGTTTGGACCTGTTCTTCACCGATTAGGTAGCACAGGGACTTT
 
. : . : . : . : . : . :
rJMSF026P23+ AGCAATCAACCATATGTCAATTCAGTCTTGCTCTATAGTTTTCACGAAACATTTAGTCAG
JMFN041E14- AGCA
rJMSF020G13+ AGCAATCAACCATATGTCAATTCAGTCTTGCTCTATAGTTTTCACGAAACATTTAGTCAG
rJMFF003O08+ AGCAATCAACCATATGTCAATTCAGTCTTGCTCTATAGTTTTCACGAAACATTTAGTCAG
rJMFF048D07+ AGCAATCAACCATATGTCAATTCAGTCTTGCTCTATAGTTTTCACGAAACATTTAGTCAG
                      ____________________________________________________________
consensus AGCAATCAACCATATGTCAATTCAGTCTTGCTCTATAGTTTTCACGAAACATTTAGTCAG
 
. : . : . : . : . : . :
rJMSF026P23+ GTGTTCTATTGTTGTAGTGCCTGTCAATTACTTGCAAAATCATG
rJMSF020G13+ GTGTTCTATTGTTGTAGTGCCTGTCAATTACTTGCAAAATCATG
rJMFF003O08+ GTGTTCTATTGTTGTAGTGCCTGTCAATTACTTGCAAAATCATGTAAAATTACAGGATAT
rJMFF048D07+ GTGTTCTATTGTTGTAGTGCCTGTCAATTACTTGCAAAATCATGTAAAATTACAGGATAT
                      ____________________________________________________________
consensus GTGTTCTATTGTTGTAGTGCCTGTCAATTACTTGCAAAATCATGTAAAATTACAGGATAT
 
. : . : . : . : . : . :
rJMFF003O08+ TCTCATTCATA
rJMFF048D07+ TCTCATTCATATATATATATTACTTCTCAGCTAAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus TCTCATTCATATATATATATTACTTCTCAGCTAAAAAAAAAAAAAAAAACTCTCCAGGGT