Contig 002708:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047I07Sequence553008881 (3)sp|P48395.1|CHSA_IPONI2e-85RecName: Full=Chalcone synthase A; AltName: Full=Naringenin-chalcone synthase A422002708 (3)sp|P48398.1|CHSB_IPOPU9e-37RecName: Full=Chalcone synthase B; AltName: Full=Naringenin-chalcone synthase B
JMFF047I10Sequence449008881 (3)gb|AAB02620.1|9e-68chalcone synthase A [Ipomoea purpurea] gb|AAB62591.1| chalcone synthase-A [Ipomo446002708 (3)gb|AAB62589.1|3e-48chalcone synthase-A [Ipomoea purpurea]
JMSF009M09Sequence270008881 (3)sp|P48395.1|CHSA_IPONI6e-41RecName: Full=Chalcone synthase A; AltName: Full=Naringenin-chalcone synthase A704002708 (3)gb|AAB62589.1|5e-146chalcone synthase-A [Ipomoea purpurea]

Alignment

This contig is upended


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rJMSF009M09+ GGCTAGCCAAAGATCTCGCCGAGAATAATAAA
                      ____________________________________________________________
consensus GGCTAGCCAAAGATCTCGCCGAGAATAATAAA
 
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rJMSF009M09+ GGTGGTCGCGTTCTGGTGGTGTGCTCGGAAGTTATGTTAAATGTATTTCGTGGGCCAAGT
                      ____________________________________________________________
consensus GGTGGTCGCGTTCTGGTGGTGTGCTCGGAAGTTATGTTAAATGTATTTCGTGGGCCAAGT
 
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rJMSF009M09+ CTAGAACAAGAAGATAATCTTTTGGCGCAATGTTTATTCGGCGATGGCTCGGCCGCCGTG
                      ____________________________________________________________
consensus CTAGAACAAGAAGATAATCTTTTGGCGCAATGTTTATTCGGCGATGGCTCGGCCGCCGTG
 
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rJMSF009M09+ ATTGTTGGGACAGAGCCGAGGCCCGGTCTTGAAACTCCATTGTTTGAGTTGGTCTCTGCC
                      ____________________________________________________________
consensus ATTGTTGGGACAGAGCCGAGGCCCGGTCTTGAAACTCCATTGTTTGAGTTGGTCTCTGCC
 
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rJMSF009M09+ GCACAAACAACCATTCCCGACACTGATTCTCACCTTAAACTGCACTTGCGAGAGATGGGG
                      ____________________________________________________________
consensus GCACAAACAACCATTCCCGACACTGATTCTCACCTTAAACTGCACTTGCGAGAGATGGGG
 
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rJMSF009M09+ CTTACATTCCATTGTAGCAAGGCTGTCCCTTCTCTCATTACCCAAAATGTGGAGGATTGT
                      ____________________________________________________________
consensus CTTACATTCCATTGTAGCAAGGCTGTCCCTTCTCTCATTACCCAAAATGTGGAGGATTGT
 
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rJMSF009M09+ TTGGTGAAGGCGTTCGAGCCGTTTGGAATCTCGGATTGGAATTCAATTTTCTGGATTTTG
                      ____________________________________________________________
consensus TTGGTGAAGGCGTTCGAGCCGTTTGGAATCTCGGATTGGAATTCAATTTTCTGGATTTTG
 
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rJMSF009M09+ CACCCTGGTGGCATTGCCATTCTGGATCGCGTGGAAGAGAAATTAGGGCTGGAGCCCGAG
rJMFF047I10+ GGCAATGCCATTCTGGATGGCGTTGAAGAGAAATTAGGGCTCGATCCCGAG
rJMFF047I07+ CCCGAG
                      ____________________________________________________________
consensus CACCCTGGTGGCATTGCCATTCTGGATGGCGTTGAAGAGAAATTAGGGCTGGATCCCGAG
 
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rJMSF009M09+ AAGTTGCGAGCGTCAAAGGACGTTCTTTCGGAGTATGGGAATTTAACAAGCGCATGTGTG
rJMFF047I10+ AAGTTGCGAGCGTCAAGGGACGTTCTTTCCCAGTATGGGAATTTAACAAGCGCATGTGTG
rJMFF047I07+ AAGTTGCGAGCGTCAAAGGACGTTCTTTCGGAGTATGGGAATTTAACAAGCGCATGTGTG
                      ____________________________________________________________
consensus AAGTTGCGAGCGTCAAAGGACGTTCTTTCGGAGTATGGGAATTTAACAAGCGCATGTGTG
 
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rJMSF009M09+ TTGTTCATATTAGATGAGATGAGAAAGAAATCCAAGAAAGATGAAGAGATGACTACTGGG
rJMFF047I10+ TTGTTCATATTAGATGAGGTGAGAAAGAAATCCAAGAAACAGCAGCAAATGACTACTGGG
rJMFF047I07+ TTGTTCATATTAGATGAGATGAGAAAGAAATCCAAGAAAGATGAAGAGATGACTACTGGG
                      ____________________________________________________________
consensus TTGTTCATATTAGATGAGATGAGAAAGAAATCCAAGAAAGATGAAGAGATGACTACTGGG
 
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rJMSF009M09+ GAGGGATTGGAATGGGGCGTGGTTTTCGGGTTTGGACCTGGACTTACCATTGATACTGTT
rJMFF047I10+ GAGGGCTTGGGATGGGGCGTGCTTTTTGGCTTTGGACCTGGACTTACCATCGATACTGTT
rJMFF047I07+ GAGGGATTGGAATGGGGCGTGGTTTTCGGGTTTGGACCTGGACTTACCATTGATACTGTT
                      ____________________________________________________________
consensus GAGGGATTGGAATGGGGCGTGGTTTTCGGGTTTGGACCTGGACTTACCATTGATACTGTT
 
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rJMSF009M09+ GTCATTCGTAGTGTGCCCACAAATTAGCT
rJMFF047I10+ GTCATTCGTAGTGTGCCCATAAATTAGCTGGC---TTAGTTCGGATCGGAGTAATTTTTA
rJMFF047I07+ GTCATTCGTAGTGTGCCCACAAATTAGCTAGCTAGTAATTAAGGATCGGAGTAATTT---
                      ____________________________________________________________
consensus GTCATTCGTAGTGTGCCCACAAATTAGCTGGCTAGTTATTTCGGATCGGAGTAATTTTTA
 
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rJMFF047I10+ TTTTTAAACAATTCATGCATACAATTAAACATTATTAAGATTGTTGTTTAATTGTCATTA
rJMFF047I07+ ---TTAAACAATTCATGCATACAATAAAACATTATTAAGAGTGTTGTTTAATTGTCATTA
                      ____________________________________________________________
consensus TTTTTAAACAATTCATGCATACAATTAAACATTATTAAGATTGTTGTTTAATTGTCATTA
 
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rJMFF047I10+ TATTAGAGGAAATCCAGCCTACT
rJMFF047I07+ TATTAGAGGAAATCCGGCCTACTGTTTACCATGTATGTTCTATTGTTACTACATGCATGT
                      ____________________________________________________________
consensus TATTAGAGGAAATCCGGCCTACTGTTTACCATGTATGTTCTATTGTTACTACATGCATGT
 
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rJMFF047I07+ TATCTACTATAAATATAAATTATGCTTTCTATCAATAAAAATTGTGAAATGTGAGAAAAG
                      ____________________________________________________________
consensus TATCTACTATAAATATAAATTATGCTTTCTATCAATAAAAATTGTGAAATGTGAGAAAAG