Contig 002707:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005K08Sequence462002707 (8)ref|XP_009618347.1|9e-38PREDICTED: RPM1-interacting protein 4 [Nicotiana tomentosiformis]569002707 (8)ref|XP_009618347.1|3e-37PREDICTED: RPM1-interacting protein 4 [Nicotiana tomentosiformis]
JMFF027N11Sequence568002707 (8)ref|XP_009618347.1|3e-37PREDICTED: RPM1-interacting protein 4 [Nicotiana tomentosiformis]565002707 (8)ref|XP_009618347.1|3e-37PREDICTED: RPM1-interacting protein 4 [Nicotiana tomentosiformis]
JMFF047H07Sequence591002707 (8)ref|XP_009618347.1|4e-37PREDICTED: RPM1-interacting protein 4 [Nicotiana tomentosiformis]532002707 (8)ref|XP_009618347.1|4e-37PREDICTED: RPM1-interacting protein 4 [Nicotiana tomentosiformis]
JMSF010E08Sequence311002707 (8)ref|XP_009618347.1|2e-38PREDICTED: RPM1-interacting protein 4 [Nicotiana tomentosiformis]489002707 (8)ref|XP_009618347.1|2e-37PREDICTED: RPM1-interacting protein 4 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF027N11+ ACGCCAACTCATACAAACAGAGAGAGAAAGAGAAAGAGAAACAAATCGTATCAACCA
rJMSF010E08+ GTATCAACCA
JMFF005K08- ACGCCAACTCATACAAACAGAGAGAGAAAGAGAAAGAGAAACAAATCGTATCAACCA
JMSF010E08- GTATCAACCA
JMFF027N11- ACGCCAACTCATACAAACAGAGAGAGAAAGAGAAAGAGAAACAAATCGTATCAACCA
rJMFF005K08+ ACGCCAACTCATACAAACAGAGAGAGAAAGAGAAAGAGAAACAAATCGTATCAACCA
JMFF047H07- ACGCCAACTCATACAAACAGAGAGAGAAAGAGAAAGAGAAACAAATCGTATCAACCA
                      ____________________________________________________________
consensus ACGCCAACTCATACAAACAGAGAGAGAAAGAGAAAGAGAAACAAATCGTATCAACCA
 
. : . : . : . : . : . :
rJMFF027N11+ AAAGCTCTCCCTCTCTTTCTCTCTCATGGCGGAAATGGGGCGACCATTGCCAAAGTTTGG
rJMSF010E08+ AAAGCTCTCCCTCTCTTTCTCTCTCATGGCGGAAATGGGGCGACCATTGCCAAAGTTTGG
JMFF005K08- AAAGCTCTCCCTCTCTTTCTCTCTCATGGCGGAAATGGGGCGACCATTGCCAAAGTTTGG
JMSF010E08- AAAGCTCTCCCTCTCTTTCTCTCTCATGGCGGAAATGGGGCGACCATTGCCAAAGTTTGG
JMFF027N11- AAAGCTCTCCCTCTCTTTCTCTCTCATGGCGGAAATGGGGCGACCATTGCCAAAGTTTGG
rJMFF005K08+ AAAGCTCTCCCTCTCTTTCTCTCTCATGGCGGAAATGGGGCGACCATTGCCAAAGTTTGG
JMFF047H07- AAAGCTCTCCCTCTCTTTCTCTCTCATGGCGGAAATGGGGCGACCATTGCCAAAGTTTGG
rJMFF047H07+ CCCTCTCTTTCTCTCTCATGGCGGAAATGGGGCGACCATTGCCAAAGTTTGG
                      ____________________________________________________________
consensus AAAGCTCTCCCTCTCTTTCTCTCTCATGGCGGAAATGGGGCGACCATTGCCAAAGTTTGG
 
. : . : . : . : . : . :
rJMFF027N11+ TGAGTGGGATGTCAATGATCCAGCTTCAGCAGAGGGGTTCACGGTGATTTTCAACAAAGC
rJMSF010E08+ TGAGTGGGATGTCAATGATCCAGCTTCAGCAGAGGGGTTCACGGTGATTTTCAACAAAGC
JMFF005K08- TGAGTGGGATGTCAATGATCCAGCTTCAGCAGAGGGGTTCACGGTGATTTTCAACAAAGC
JMSF010E08- TGAGTGGGATGTCAATGATCCAGCTTCAGCAGAGGGGTTCACGGTGATTTTCAACAAAGC
JMFF027N11- TGAGTGGGATGTCAATGATCCAGCTTCAGCAGAGGGGTTCACGGTGATTTTCAACAAAGC
rJMFF005K08+ TGAGTGGGATGTCAATGATCCAGCTTCAGCAGAGGGGTTCACGGTGATTTTCAACAAAGC
JMFF047H07- TGAGTGGGATGTCAATGATCCAGCTTCAGCAGAGGGGTTCACGGTGATTTTCAACAAAGC
rJMFF047H07+ TGAGTGGGATGTCAATGATCCAGCTTCAGCAGAGGGGTTCACGGTGATTTTCAACAAAGC
                      ____________________________________________________________
consensus TGAGTGGGATGTCAATGATCCAGCTTCAGCAGAGGGGTTCACGGTGATTTTCAACAAAGC
 
. : . : . : . : . : . :
rJMFF027N11+ TAGAAATGAGAAAAGGGCAGGTGGCAGGCCAGAGTCGCCACCAAAGAGAGATCCTGGATA
rJMSF010E08+ TAGAAATGAGAAAAGGGCAGGTGGCAGGCCAGAGTCGCCACCAAAGAGAGATCCTGGATA
JMFF005K08- TAGAAATGAGAAAAGGGCAGGTGGCAGGCCAGAGTCGCCACCAAAGAGAGATCCTGGATA
JMSF010E08- TAGAAATGAGAAAAGGGCAGGTGGCAGGCCAGAGTCGCCACCAAAGAGAGATCCTGGATA
JMFF027N11- TAGAAATGAGAAAAGGGCAGGTGGCAGGCCAGAGTCGCCACCAAAGAGAGATCCTGGATA
rJMFF005K08+ TAGAAATGAGAAAAGGGCAGGTGGCAGGCCAGAGTCGCCACCAAAGAGAGATCCTGGATA
JMFF047H07- TAGAAATGAGAAAAGGGCAGGTGGCAGGCCAGAGTCGCCACCAAAGAGAGATCCTGGATA
rJMFF047H07+ TAGAAATGAGAAAAGGGCAGGTGGCAGGCCAGAGTCGCCACCAAAGAGAGATCCTGGATA
                      ____________________________________________________________
consensus TAGAAATGAGAAAAGGGCAGGTGGCAGGCCAGAGTCGCCACCAAAGAGAGATCCTGGATA
 
. : . : . : . : . : . :
rJMFF027N11+ TAAACGTAAAGCTACTCTTGGAAAGCCTCAATCAAAGAAATGGTTCTGTTGCATGCAATC
rJMSF010E08+ TAAACGTAAAGCTACTCTTGGAAAGCCTCAATCAAAGAAATGGTTCTGTTGCATGCAATC
JMFF005K08- TAAACGTAAAGCTACTCTTGGAAAGCCTCAATCAAAGAAATGGTTCTGTTGCATGCAATC
JMSF010E08- TAAACGTAAAGCTACTCTTGGAAAGCCTCAATCAAAGAAATGGTTCTGTTGCATGCAATC
JMFF027N11- TAAACGTAAAGCTACTCTTGGAAAGCCTCAATCAAAGAAATGGTTCTGTTGCATGCAATC
rJMFF005K08+ TAAACGTAAAGCTACTCTTGGAAAGCCTCAATCAAAGAAATGGTTCTGTTGCATGCAATC
JMFF047H07- TAAACGTAAAGCTACTCTTGGAAAGCCTCAATCAAAGAAATGGTTCTGTTGCATGCAATC
rJMFF047H07+ TAAACGTAAAGCTACTCTTGGAAAGCCTCAATCAAAGAAATGGTTCTGTTGCATGCAATC
                      ____________________________________________________________
consensus TAAACGTAAAGCTACTCTTGGAAAGCCTCAATCAAAGAAATGGTTCTGTTGCATGCAATC
 
. : . : . : . : . : . :
rJMFF027N11+ TTCTCCTGCTGAATGATGAACACTCTCTACGCTCATTTGTGCTGTAAAGATAATCTCCAG
rJMSF010E08+ TTCTCCTGCTGAATGATGAACACTCTCTACGCTCATTTGTGCTGTAAAGATAATCTCCAG
JMFF005K08- TTCTCCTGCTGAATGATGAACACTCTCTACGCTCATTTGTGCTGTAAAGATAATCTCCAG
JMSF010E08- TTCTCCTGCTGAATGATGAACACTCTCTACGCTCATTTGTGCTGTAAAGATAATCTCCA
JMFF027N11- TTCTCCTGCTGAATGATGAACACTCTCTACGCTCATTTGTGCTGTAAAGATAATCTCCAG
rJMFF005K08+ TTCTCCTGCTGAATGATGAACACTCTCTACGCTCATTTGTGCTGTAAAGATAATCTCCAG
JMFF047H07- TTCTCCTGCTGAATGATGAACACTCTCTACGCTCATTTGTGCTGTAAAGATAATCTCCAG
rJMFF047H07+ TTCTCCTGCTGAATGATGAACACTCTCTACGCTCATTTGTGCTGTAAAGATAATCTCCAG
                      ____________________________________________________________
consensus TTCTCCTGCTGAATGATGAACACTCTCTACGCTCATTTGTGCTGTAAAGATAATCTCCAG
 
. : . : . : . : . : . :
rJMFF027N11+ AAACCACCGTGCAATTCATGTGTGTTCCACAAGACCGGAGCTCTAACTACACTGTGATAA
rJMSF010E08+ AAACCACCGTGCAATTCATGTGTGTTCCACAAGACCGGAGCTCTAACTACACTGTGATAA
JMFF005K08- AAACCACCGTGCAATTCATGTGTGTTCCACAAGACCGGAGCTCTAACTACACTGTGATAA
JMFF027N11- AAACCACCGTGCAATTCATGTGTGTTCCACAAGACCGGAGCTCTAACTACACTGTGATAA
rJMFF005K08+ AAACCACCGTGCAATTCATGTGTGTTCCACAAGACCGGAGCTCTAACTACACTGTGATAA
JMFF047H07- AAACCACCGTGCAATTCATGTGTGTTCCACAAGACCGGAGCTCTAACTACACTGTGATAA
rJMFF047H07+ AAACCACCGTGCAATTCATGTGTGTTCCACAAGACCGGAGCTCTAACTACACTGTGATAA
                      ____________________________________________________________
consensus AAACCACCGTGCAATTCATGTGTGTTCCACAAGACCGGAGCTCTAACTACACTGTGATAA
 
. : . : . : . : . : . :
rJMFF027N11+ GTCATGCTGGAATTTCTTATTGATTATTTTTTTTTCTTTTTGGTTTGAGAAGTGATAGTG
rJMSF010E08+ GTCATGCTGGAATTTCTTATTGATTATTTTTTTTTCTTTTTGGTTTGAGAAGTGATAGTG
JMFF005K08- GTCATGCTGGAATTTCTTATTGATTATTTTTTTTTCTTTTTGGTT
JMFF027N11- GTCATGCTGGAATTTCTTATTGATTATTTTTTTTTCTTTTTGGTTTGAGAAGTGATAGTG
rJMFF005K08+ GTCATGCTGGAATTTCTTATTGATTATTTTTTTTTCTTTTTGGTTTGAGAAGTGATAGTG
JMFF047H07- GTCATGCTGGAATTTCTTATTGATTATTTTTTTTTCTTTTTGGTTTGAGAAGTGATAGTG
rJMFF047H07+ GTCATGCTGGAATTTCTTATTGATTATTTTTTTTTCTTTTTGGTTTGAGAAGTGATAGTG
                      ____________________________________________________________
consensus GTCATGCTGGAATTTCTTATTGATTATTTTTTTTTCTTTTTGGTTTGAGAAGTGATAGTG
 
. : . : . : . : . : . :
rJMFF027N11+ TGCACCAAGTTGTTCTATTGTTCTGTTTTTATTTTCTATCATCGTTAAATCGAGGTCATG
rJMSF010E08+ TGCACCAAGTTGTTCTATTGTTCTGTTTTTATTTTCTATCATCGTTAAATCGAGGTC
JMFF027N11- TGCACCAAGTTGTTCTATTGTTCTGTTTTTATTTTCTATCATCGTTAAATCGAGGTCATG
rJMFF005K08+ TGCACCAAGTTGTTCTATTGTTCTGTTTTTATTTTCTATCATCGTTAAATCGAGGTCATG
JMFF047H07- TGCACCAAGTTGTTCTATTGTTCTGTTTTTATTTTCTATCATCGTTAAATCGAGGTCATG
rJMFF047H07+ TGCACCAAGTTGTTCTATTGTTCTGTTTTTATTTTCTATCATCGTTAAATCGAGGTCATG
                      ____________________________________________________________
consensus TGCACCAAGTTGTTCTATTGTTCTGTTTTTATTTTCTATCATCGTTAAATCGAGGTCATG
 
. : . : . : . : . : . :
rJMFF027N11+ GTGAATCTCTCTTTAATGTATT
JMFF027N11- GTGAATCTCTCTTTAATGTATTTGCATAATG
rJMFF005K08+ GTGAATCTCTCTTTAATGTATTTGCATAATG
JMFF047H07- GTGAATCTCTCTTTAATGTATTTGCATAATGGATTTGAATGCTATTTACTTGTC
rJMFF047H07+ GTGAATCTCTCTTTAATGTATTTGCATAATGGATTTGAATGCTATTTACTTGTCACGGAT
                      ____________________________________________________________
consensus GTGAATCTCTCTTTAATGTATTTGCATAATGGATTTGAATGCTATTTACTTGTCACGGAT