Contig 002703:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047B03Sequence645004950 (3)ref|XP_010266820.1|4e-71PREDICTED: synaptotagmin-2-like [Nelumbo nucifera]260002703 (3)ref|XP_006422611.1|9e-11hypothetical protein CICLE_v10028159mg [Citrus clementina] gb|ESR35851.1| hypoth
JMSF005K01Sequence396004950 (3)emb|CDO96921.1|4e-34unnamed protein product [Coffea canephora]479002703 (3)emb|CDO96921.1|2e-64unnamed protein product [Coffea canephora]
JMSF011D03Sequence296004950 (3)ref|XP_010266820.1|5e-04PREDICTED: synaptotagmin-2-like [Nelumbo nucifera]731002703 (3)ref|XP_011088598.1|6e-108PREDICTED: synaptotagmin-1-like [Sesamum indicum]

Alignment

This contig is upended


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rJMSF011D03+                                               ATCTCAAGTACTGGAGATCTATG
                      ____________________________________________________________
consensus                                                  ATCTCAAGTACTGGAGATCTATG
 
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rJMSF011D03+          TTTATGATTGGGAGCAGGTTGGGAAACATGAAAAGATGGGCATGAATGTTATCCCACTCA
                      ____________________________________________________________
consensus             TTTATGATTGGGAGCAGGTTGGGAAACATGAAAAGATGGGCATGAATGTTATCCCACTCA
 
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rJMSF011D03+          AGGATCTAACCCCTGATGATCCAAAAACTATGACCCTTGATCTCCTAAAGAATATGGATC
                      ____________________________________________________________
consensus             AGGATCTAACCCCTGATGATCCAAAAACTATGACCCTTGATCTCCTAAAGAATATGGATC
 
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rJMSF005K01+                                                                    GC
rJMSF011D03+          CAAATGATATTCAGAACAATAAATCACGTGGGCAGATCATGATGGAACTAACTTACAAGC
                      ____________________________________________________________
consensus             CAAATGATATTCAGAACAATAAATCACGTGGGCAGATCATGATGGAACTAACTTACAAGC
 
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rJMSF005K01+          CANTCAAGGAGGAGGACAAGCCAAACCAATGTTGAGTCTGGTACANTTGAAAAAGCTCCA
rJMSF011D03+          CATTCAAGGAGGAGGACAAGCCAAA-CAATGTTGAGTCTGGTACAATTGAAAAAGCTCCA
                      ____________________________________________________________
consensus             CATTCAAGGAGGAGGACAAGCCAAACCAATGTTGAGTCTGGTACAATTGAAAAAGCTCCA
 
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rJMSF005K01+          GAAGGGACACCGCCAGGAGGAGGTGTACTTGCAGTATTAATCCATGAAGCTGAAGATGTT
rJMSF011D03+          GAAGGGACACCGCCAGGAGGAGGTGTACTTGCAGTATTAATCCATGAAGCTGAAGATGTT
                      ____________________________________________________________
consensus             GAAGGGACACCGCCAGGAGGAGGTGTACTTGCAGTATTAATCCATGAAGCTGAAGATGTT
 
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rJMSF005K01+          GAAGGAAAGCACCATACTAACCCATATGTCCGTATCATTTTTAAAGGGGAGGAGAAAAAA
rJMSF011D03+          GAAGGAAAGCACCATACTAACCCATATGTCCGTATCATTTTTAAAGGGGAGGAGAAAAAA
                      ____________________________________________________________
consensus             GAAGGAAAGCACCATACTAACCCATATGTCCGTATCATTTTTAAAGGGGAGGAGAAAAAA
 
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rJMSF005K01+          ACTAAGCAACTGAAGAAAAGTAGGGATCCAAGATGGGATGAGGAGTTCACTTTCATGTTG
rJMSF011D03+          ACTAAGCAACTGAAGAAAAGTAGGGATCCAAGATGGGATGAGGAGTTCACTTTCATGTTG
                      ____________________________________________________________
consensus             ACTAAGCAACTGAAGAAAAGTAGGGATCCAAGATGGGATGAGGAGTTCACTTTCATGTTG
 
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rJMSF005K01+          GAGAAGCCTCCTGTGGATGATAAGCTGCACATAGAAGTNGTCAGCACCTCAATGAGGATC
rJMSF011D03+          GAGAAGCCTCCTGTGGATGATAAGCTGCACATAGAAGTTGTCAGCACCTCAATGAGGATC
                      ____________________________________________________________
consensus             GAGAAGCCTCCTGTGGATGATAAGCTGCACATAGAAGTTGTCAGCACCTCAATGAGGATC
 
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rJMSF005K01+          GGTTTACTGCATCCTAAGGAAATACTGGGGTATGTTGATATCAACCTTTCAGATGTTGTT
rJMSF011D03+          GGTTTACTGCATCCTAAGGAAATACTGGGGTATGTTGATATCAACCTTTCAGGTGTTGTT
rJMFF047B03+                                                 ATCAACCTTTCAGATGTTGTT
                      ____________________________________________________________
consensus             GGTTTACTGCATCCTAAGGAAATACTGGGGTATGTTGATATCAACCTTTCAGATGTTGTT
 
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rJMSF005K01+          AGCAACAAAAGGATCAACGAGAAGTACCATCTCATTGATTCAAAGAATGGGAAGATTCAA
rJMSF011D03+          AGCAACAAAAGGATCAACGAGAAGTACCATCTCATTGATTCAAAGAATGGGAAGATTCAA
rJMFF047B03+          AGCAACAAAAGGATCAACGAGAAGTTCCATCTCATTGATTCAAAGAATGGGAAGATTCAA
                      ____________________________________________________________
consensus             AGCAACAAAAGGATCAACGAGAAGTACCATCTCATTGATTCAAAGAATGGGAAGATTCAA
 
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rJMSF005K01+          ATTGAGCTGACATGGAATTCGGCTTCTTAATCTTGGTTGGNGTTAGTGAGAC        
rJMSF011D03+          ATTGAGCTGACATGGAATTCGGCTTCTTAATCTTGGTTGGTGTTATTGAGACCAAGAATT
rJMFF047B03+          ATTGAGCTGACATGGAATTCGGCTTTTTAATCTTGGTTGGTGTTATTGAGA-CAAGAATT
                      ____________________________________________________________
consensus             ATTGAGCTGACATGGAATTCGGCTTCTTAATCTTGGTTGGTGTTATTGAGACCAAGAATT
 
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rJMSF011D03+          GTACTGTATATGTAC                                             
rJMFF047B03+          GTACTGTATATGTACTTGATGTACATTATTACCATTTACTTTTACAAATTCTCGGTGATA
                      ____________________________________________________________
consensus             GTACTGTATATGTACTTGATGTACATTATTACCATTTACTTTTACAAATTCTCGGTGATA
 
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rJMFF047B03+          TGTTTTGCTCTTTTGCTTCGGCTTTATCATATTTTACTCATGGCAGAGAATTTTTTCCTG
                      ____________________________________________________________
consensus             TGTTTTGCTCTTTTGCTTCGGCTTTATCATATTTTACTCATGGCAGAGAATTTTTTCCTG