Contig 002687:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037G10Sequence555010274 (5)ref|XP_004230573.1|308PREDICTED: uncharacterized protein LOC101252825 [Solanum lycopersicum]663002687 (3)ref|XP_009786217.1|176PREDICTED: uncharacterized protein LOC104234359 [Nicotiana sylvestris]
JMFF044G01Sequence626010274 (5)ref|XP_004230573.1|343PREDICTED: uncharacterized protein LOC101252825 [Solanum lycopersicum]586002687 (3)ref|XP_004230573.1|114PREDICTED: uncharacterized protein LOC101252825 [Solanum lycopersicum]
JMFF044P23Sequence628010274 (5)ref|XP_004230573.1|343PREDICTED: uncharacterized protein LOC101252825 [Solanum lycopersicum]623002687 (3)ref|XP_004230573.1|114PREDICTED: uncharacterized protein LOC101252825 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF037G10+                                                               CAGGTAG
                      ____________________________________________________________
consensus                                                                  CAGGTAG
 
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rJMFF037G10+          GATACTGGACCGNGAAACAAATTCCCGGTGGAGTATTACCGACGAATAATATGGGAACGG
                      ____________________________________________________________
consensus             GATACTGGACCGNGAAACAAATTCCCGGTGGAGTATTACCGACGAATAATATGGGAACGG
 
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rJMFF037G10+          AACAACCTGTCTACATGATTCCTGCCACCGCGAGTGCATACCACGCGCCTATGGTGAGGC
                      ____________________________________________________________
consensus             AACAACCTGTCTACATGATTCCTGCCACCGCGAGTGCATACCACGCGCCTATGGTGAGGC
 
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rJMFF037G10+          CAATGGCCGCACCGACAGGTCAGGGCTACTACGCTGTCCAGAGGATGCCGCCGGAAGCGT
rJMFF044G01+                                               CCAGAGGATGCCGCCGGAAGCGT
rJMFF044P23+                                               CCAGAGGATGCCGCCGGAAGCGT
                      ____________________________________________________________
consensus             CAATGGCCGCACCGACAGGTCAGGGCTACTACGCTGTCCAGAGGATGCCGCCGGAAGCGT
 
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rJMFF037G10+          ACCGGGACCAGACGGTGTACAATGTTATGTCCAACGTCCCTCCCTCCGTGCCGACAGTGG
rJMFF044G01+          ACCGGGACCAGACGGTGTACAATGTTATGTCCAACGTCCCTCCCTCCGTGCCGACAGTGG
rJMFF044P23+          ACCGGGACCAGACGGTGTACAATGTTATGTCCAACGTCCCTCCCTCCGTGCCGACAGTGG
                      ____________________________________________________________
consensus             ACCGGGACCAGACGGTGTACAATGTTATGTCCAACGTCCCTCCCTCCGTGCCGACAGTGG
 
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rJMFF037G10+          CGACGGGACAGCCAACCCTACCCCCTCAGGCGGCGCAGAAGGTGGCGGGATACTCCGACG
rJMFF044G01+          CGACGGGACAGCCAACCCTACCCCCTCAGGCGGCGCAGAAGGTGGCGGGATACTCCGACG
rJMFF044P23+          CGACGGGACAGCCAACCCTACCCCCTCAGGCGGCGCAGAAGGTGGCGGGATACTCCGACG
                      ____________________________________________________________
consensus             CGACGGGACAGCCAACCCTACCCCCTCAGGCGGCGCAGAAGGTGGCGGGATACTCCGACG
 
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rJMFF037G10+          GATACGGGATGGTGAGGCCACCAAATACAGGCGCAGTTGGGATCGGGATGACCACGGACG
rJMFF044G01+          GATACGGGATGGTGAGGCCACCAAATACAGGCGCAGTTGGGATCGGGATGACCACGGACG
rJMFF044P23+          GATACGGGATGGTGAGGCCACCAAATACAGGCGCAGTTGGGATCGGGATGACCACGGACG
                      ____________________________________________________________
consensus             GATACGGGATGGTGAGGCCACCAAATACAGGCGCAGTTGGGATCGGGATGACCACGGACG
 
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rJMFF037G10+          CGGGGGGCTACGCACAAATGGCGTACGACGGTGGAGTTGGCAGACAGGTGTACTATACGC
rJMFF044G01+          CGGGGGGCTACGCACAAATGGCGTACGACGGTGGAGTTGGCAGACAGGTGTACTATACGC
rJMFF044P23+          CGGGGGGCTACGCACAAATGGCGTACGACGGTGGAGTTGGCAGACAGGTGTACTATACGC
                      ____________________________________________________________
consensus             CGGGGGGCTACGCACAAATGGCGTACGACGGTGGAGTTGGCAGACAGGTGTACTATACGC
 
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rJMFF037G10+          CGGGAGGTATGGTGGCGCCGCCAGCACCCCAACAACAGCAGCAGCAGCAGTATCAGGCTG
rJMFF044G01+          CGGGAGGTATGGTGGCGCCGCCAGCACCCCAACAACAGCAGCAGCAGCAGTATCAGGCTG
rJMFF044P23+          CGGGAGGTATGGTGGCGCCGCCAGCACCCCAACAACAGCAGCAGCAGCAGTATCAGGCTG
                      ____________________________________________________________
consensus             CGGGAGGTATGGTGGCGCCGCCAGCACCCCAACAACAGCAGCAGCAGCAGTATCAGGCTG
 
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rJMFF037G10+          CGAAGGCGGCGGCGGCAGCCGGTAACTCCGACATCAGACCTCCCGCCGCTCTGAATCAAG
rJMFF044G01+          CGAAGGCGGCGGCGGCAGCCGGTAACTCCGACATCAGACCTCCCGCCGCTCTGAATCAAG
rJMFF044P23+          CGAAGGCGGCGGCGGCAGCCGGTAACTCCGACATCAGACCTCCCGCCGCTCTGAATCAAG
                      ____________________________________________________________
consensus             CGAAGGCGGCGGCGGCAGCCGGTAACTCCGACATCAGACCTCCCGCCGCTCTGAATCAAG
 
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rJMFF037G10+          ACGCCGGTAAGGTTGTTCCTAAAGCCACCCAGGCTTCCGTGTGATTAACAACCGAGATTA
rJMFF044G01+          ACGCCGGTAAGGTTGTTCCTAAAGCCACCCAGGCTTCCGTGTGATTAACAACCGAGATTA
rJMFF044P23+          ACGCCGGTAAGGTTGTTCCTAAAGCCACCCAGGCTTCCGTGTGATTAACAACCGAGATTA
                      ____________________________________________________________
consensus             ACGCCGGTAAGGTTGTTCCTAAAGCCACCCAGGCTTCCGTGTGATTAACAACCGAGATTA
 
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rJMFF037G10+          AACGGAAAAAAATTGCCATAGTCCTAATTATATCAGTGTAATAAT               
rJMFF044G01+          AACGGAAAAAAATTGCCATAGTCCTAATTATATCAGTGTAATAATGTTCTCTAGATATTA
rJMFF044P23+          AACGGAAAAAAATTGCCATAGTCCTAATTATATCAGTGTAATAATGTTCTCTAGATATTA
                      ____________________________________________________________
consensus             AACGGAAAAAAATTGCCATAGTCCTAATTATATCAGTGTAATAATGTTCTCTAGATATTA
 
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rJMFF044G01+          TCATTATCTTGTTTCAAGCATCATTATCCTTGTGTTCTGCTGTACATTTAAGTGGAAATC
rJMFF044P23+          TCATTATCTTGTTTCAAGCATCATTATCCTTGTGTTCTGCTGTACATTTAAGTGGAAATC
                      ____________________________________________________________
consensus             TCATTATCTTGTTTCAAGCATCATTATCCTTGTGTTCTGCTGTACATTTAAGTGGAAATC
 
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rJMFF044G01+          AAATCAAATTTCGTCTT                                           
rJMFF044P23+          AAATCAAATTTCGTCTTCCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             AAATCAAATTTCGTCTTCCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG