Contig 002677:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF048D07+                                                                   TCA
                      ____________________________________________________________
consensus                                                                      TCA
 
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rJMSF048D07+          GCATTATGGTGCGGTACAAGGGCTAGCTGCCCTTGGCCCTAGTGTGGTTCGGCTGCTTTT
                      ____________________________________________________________
consensus             GCATTATGGTGCGGTACAAGGGCTAGCTGCCCTTGGCCCTAGTGTGGTTCGGCTGCTTTT
 
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rJMSF048D07+          GCTGCCAAACCTTGAGCCTTATATGCAACTGTTGGAGCCAGAAATGCAACTAGAAAAACA
                      ____________________________________________________________
consensus             GCTGCCAAACCTTGAGCCTTATATGCAACTGTTGGAGCCAGAAATGCAACTAGAAAAACA
 
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rJMSF048D07+          AAAGAATGAGATGAAGAGGCATGAAGCATGGCGAGTGTATGGTGCCCTGGCGTGTGCAAC
                      ____________________________________________________________
consensus             AAAGAATGAGATGAAGAGGCATGAAGCATGGCGAGTGTATGGTGCCCTGGCGTGTGCAAC
 
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rJMSF048D07+          TGGTTTATGTATTTATGATCGGCTTAAGACTCTGCGCACTTTACTGCCCTCACCAGCGTG
rJMFF043N03+          TGGTTTATGTATTTATGATCGGCTTAAGACTCTGCGCACTTTACTGCCCTCACCAGCGTG
                      ____________________________________________________________
consensus             TGGTTTATGTATTTATGATCGGCTTAAGACTCTGCGCACTTTACTGCCCTCACCAGCGTG
 
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rJMSF048D07+          TGCTGTTCTGAAGAGTAGGATGAAAGTCGCTTCAATATCAAATAAAAGTAAAATGAGCAT
rJMFF043N03+          TGCTGTTCTGAAGAGTAGGATGAAAGTCGCTTCAATATCAAATAAAAGTAAAATGAGCAT
                      ____________________________________________________________
consensus             TGCTGTTCTGAAGAGTAGGATGAAAGTCGCTTCAATATCAAATAAAAGTAAAATGAGCAT
 
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rJMSF048D07+          GGACAACACAGTGCAGCAGCCCCCACTCAAGAAGTTGGTGACCGACGGGCCATCTGGTGC
rJMFF043N03+          GGACAACACAGTGCAGCAGCCCCCACTCAAGAAGTTGGTGACCGACGGGCCATCTGGTGC
                      ____________________________________________________________
consensus             GGACAACACAGTGCAGCAGCCCCCACTCAAGAAGTTGGTGACCGACGGGCCATCTGGTGC
 
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rJMSF048D07+          AGTGCCTGCAAAGTCGTTGCCTGGAGGAACACAAGGCACTACTGGGGGATATGCTGCTGC
rJMFF043N03+          AGTGCCTGCAAAGTCGTTGCCTGGAGGAACACAAGGCACTACTGGGGGATATGCTGCTGC
                      ____________________________________________________________
consensus             AGTGCCTGCAAAGTCGTTGCCTGGAGGAACACAAGGCACTACTGGGGGATATGCTGCTGC
 
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rJMSF048D07+          CAGTTTCCCATCTACTTTGCCGAGTGAGAATTTGCGAATGGGTAGTAGACGGGATATGGT
rJMFF043N03+          CAGTTTCCCATCTACTTTGCCGAGTGAGAATTTGCGAATGGGTAGTAGACGGGATATGGT
                      ____________________________________________________________
consensus             CAGTTTCCCATCTACTTTGCCGAGTGAGAATTTGCGAATGGGTAGTAGACGGGATATGGT
 
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rJMSF048D07+          TGGTGGTCAAGCCTCAAAAGCGGCAGCTGCCCTTGATCGGGCGTCGAAAGGGGATGTGGA
rJMFF043N03+          TGGTGGTCAAGCCTCAAAAGCGGCAGCTGCCCTTGATCGGGCGTCGAAAGGGGATGTGGA
                      ____________________________________________________________
consensus             TGGTGGTCAAGCCTCAAAAGCGGCAGCTGCCCTTGATCGGGCGTCGAAAGGGGATGTGGA
 
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rJMSF048D07+          TGTTGCACATTTGATACCTATGATGTATGAACATTTTGGTGAAAGTGTGATATCCTTCAC
rJMFF043N03+          TGTTGCACATTTGATACCTATGATGTATGAACATTTTGGTGAAAGTGTGATATCCTTCAC
                      ____________________________________________________________
consensus             TGTTGCACATTTGATACCTATGATGTATGAACATTTTGGTGAAAGTGTGATATCCTTCAC
 
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rJMSF048D07+          CCTTGCACCTGAGTTGTCAATCTTCCTATGATCCCTAGAGTCCTAGAGACTAATTTAACA
rJMFF043N03+          CCTTGCACCTGAGTTGTCAATCTTCCTATGATCCCTAGAGTCCTAGAGACTAATTTAACA
                      ____________________________________________________________
consensus             CCTTGCACCTGAGTTGTCAATCTTCCTATGATCCCTAGAGTCCTAGAGACTAATTTAACA
 
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rJMSF048D07+          GGAATGCCCACATTTGGTGGGGCATCTAGTTGCTAGCAGTCCTTGTACATAATGCAGTGT
rJMFF043N03+          GGAATGCCCACATTTGGTGGGGCATCTAGTTGCTAGCAGTCCTTGTACATAATGCAGTGT
                      ____________________________________________________________
consensus             GGAATGCCCACATTTGGTGGGGCATCTAGTTGCTAGCAGTCCTTGTACATAATGCAGTGT
 
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rJMSF048D07+          AATTTACAAATCAACCCTCCGTTAGACAATCCCTAGTT                      
rJMFF043N03+          AATTTACAAATCAACCCTCCGTTAGACAATCCCTAGTTTGAATTATTCTTTTTAATGTAT
                      ____________________________________________________________
consensus             AATTTACAAATCAACCCTCCGTTAGACAATCCCTAGTTTGAATTATTCTTTTTAATGTAT
 
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rJMFF043N03+          CATTGTATTATTTTAATAGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             CATTGTATTATTTTAATAGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG