Contig 002673:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004A05Sequence553011500 (14)ref|XP_009793502.1|6e-70PREDICTED: 26S protease regulatory subunit 6B homolog [Nicotiana sylvestris]767002673 (15)emb|CBI15803.3|2e-132unnamed protein product [Vitis vinifera]
JMFF007K02Sequence566011500 (14)ref|XP_009793502.1|3e-81PREDICTED: 26S protease regulatory subunit 6B homolog [Nicotiana sylvestris]759002673 (15)emb|CBI15803.3|2e-134unnamed protein product [Vitis vinifera]
JMFF012O05Sequence571011500 (14)ref|XP_009793502.1|1e-70PREDICTED: 26S protease regulatory subunit 6B homolog [Nicotiana sylvestris]727002673 (15)ref|XP_009592167.1|3e-114PREDICTED: 26S protease regulatory subunit 6B homolog [Nicotiana tomentosiformi
JMFF013F01Sequence540011500 (14)ref|XP_009793502.1|1e-73PREDICTED: 26S protease regulatory subunit 6B homolog [Nicotiana sylvestris]626002673 (15)ref|XP_009592167.1|9e-97PREDICTED: 26S protease regulatory subunit 6B homolog [Nicotiana tomentosiformi
JMFF024B02Sequence477011500 (14)ref|XP_009793502.1|8e-58PREDICTED: 26S protease regulatory subunit 6B homolog [Nicotiana sylvestris]777002673 (15)emb|CBI15803.3|3e-131unnamed protein product [Vitis vinifera]
JMFF029J03Sequence484011500 (14)ref|XP_009793502.1|3e-60PREDICTED: 26S protease regulatory subunit 6B homolog [Nicotiana sylvestris]742002673 (15)emb|CBI15803.3|1e-119unnamed protein product [Vitis vinifera]
JMFF031A12Sequence588011500 (14)ref|XP_009793502.1|4e-81PREDICTED: 26S protease regulatory subunit 6B homolog [Nicotiana sylvestris]770002673 (15)emb|CBI15803.3|2e-133unnamed protein product [Vitis vinifera]
JMFF036B13Sequence293002673 (15)269002673 (15)
JMFF038A01Sequence557011500 (14)ref|XP_009793502.1|1e-77PREDICTED: 26S protease regulatory subunit 6B homolog [Nicotiana sylvestris]359002673 (15)gb|KDO36506.1|3e-27hypothetical protein CISIN_1g030674mg [Citrus sinensis]
JMFF043C18Sequence641011500 (14)ref|XP_009793502.1|9e-99PREDICTED: 26S protease regulatory subunit 6B homolog [Nicotiana sylvestris]610002673 (15)ref|XP_009592167.1|3e-85PREDICTED: 26S protease regulatory subunit 6B homolog [Nicotiana tomentosiformi
JMFF043G18Sequence648011500 (14)ref|XP_006350894.1|2e-101PREDICTED: 26S protease regulatory subunit 6B homolog [Solanum tuberosum]638002673 (15)ref|XP_009592167.1|1e-81PREDICTED: 26S protease regulatory subunit 6B homolog [Nicotiana tomentosiformi
JMSF006L04Sequence369011500 (14)ref|XP_009793502.1|1e-31PREDICTED: 26S protease regulatory subunit 6B homolog [Nicotiana sylvestris]387002673 (15)ref|XP_009592167.1|5e-57PREDICTED: 26S protease regulatory subunit 6B homolog [Nicotiana tomentosiformi
JMSF039G10Sequence670011500 (14)ref|XP_009793502.1|2e-108PREDICTED: 26S protease regulatory subunit 6B homolog [Nicotiana sylvestris]903002673 (15)emb|CBI15803.3|5e-148unnamed protein product [Vitis vinifera]
JMSF041A24Sequence769011500 (14)ref|XP_006350894.1|1e-120PREDICTED: 26S protease regulatory subunit 6B homolog [Solanum tuberosum]656002673 (15)ref|XP_009592167.1|7e-107PREDICTED: 26S protease regulatory subunit 6B homolog [Nicotiana tomentosiformi

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF039G10+ CCTCCAG
                      ____________________________________________________________
consensus CCTCCAG
 
. : . : . : . : . : . :
rJMFF004A05+ CATTA
rJMFF031A12+ CATTA
rJMFF007K02+ CATTA
rJMSF039G10+ GTACTGGTAAAACTATGCTTGCAAAGGCTGTTGCTAACCACACAACGGCATCTTTCATTA
                      ____________________________________________________________
consensus GTACTGGTAAAACTATGCTTGCAAAGGCTGTTGCTAACCACACAACGGCATCTTTCATTA
 
. : . : . : . : . : . :
rJMFF024B02+ GTGGGCTCAGAATTTGTCCAGAAGTACCTGGGTGAGGGTCCCCGTATGGTTCGTG
rJMFF004A05+ GGGTTGTGGGCTCAGAATTTGTCCAGAAGTACCTGGGTGAGGGTCCCCGTATGGTTCGTG
rJMFF031A12+ GGGTTGTGGGCTCAGAATTTGTCCAGAAGTACCTGGGTGAGGGTCCCCGTATGGTTCGTG
rJMFF007K02+ GGGTTGTGGGCTCAGAATTTGTCCAGAAGTACCTGGGTGAGGGTCCCCGTATGGTTCGTG
rJMFF029J03+ CCCCGTATGGTTCGTG
rJMSF039G10+ GGGTTGTGGGCTCAGAATTTGTCCAGAAGTACCTGGTTGAGGGTCCCCGTATGGTTCGTG
                      ____________________________________________________________
consensus GGGTTGTGGGCTCAGAATTTGTCCAGAAGTACCTGGGTGAGGGTCCCCGTATGGTTCGTG
 
. : . : . : . : . : . :
rJMFF012O05+ CCGCNTAGCCAAAGAAAATGCCCCTGCAATCATATTCATTGATGAGGTAGATG
rJMSF041A24+ ATTGATGAGGTAGATG
rJMFF024B02+ ATGTTTTCCGCCTAGCCAAAGAAAATGCCCCTGCAATCATATTCATTGATGAGGTAGATG
rJMFF004A05+ ATGTTTTCCGCNTAGCCAAAGAAAATGCCCCTGCAATCATATTCATTGATGAGGTAGATG
rJMFF031A12+ ATGTTTTCAGCCTAGCCAAAGAAAATGCCCCTGCAATCATATTCATTGATGAGGTAGATG
rJMFF007K02+ ATGTTTTCCGCCTAGCCAAAGAAAATGCCCCTGCAATCATATTCATTGATGAGGTAGATG
rJMFF029J03+ ATGTTTTCCGCNTAGCCAAAGAAAATGCCCCTGCAATCATATTCATTGATGAGGTAGATG
rJMSF039G10+ ATGTTTTCCGCCTAGCCAAAGAAAATGCCCCTGCAATCATATTCATTGATGAGGTAGATG
                      ____________________________________________________________
consensus ATGTTTTCCGCCTAGCCAAAGAAAATGCCCCTGCAATCATATTCATTGATGAGGTAGATG
 
. : . : . : . : . : . :
rJMFF012O05+ CAATTGCCACTGCTAGGTTTGATGCTCAGACTGGTGCTGATAGAGAAGTTCAGCGTATTC
rJMSF041A24+ CAATTGCCACTGCTAGGTTTGATGCTCAGACTGGTGCTGATAGAGAAGTTCAGCGTATTC
rJMFF013F01+ TCAGACTGGTGCTGATAGAGAAGTTCAGCGTATTT
rJMFF024B02+ CAATTGCCACTGCTAGGTTTGATGCTCAGACTGGTGCTGATAGAGAAGTTCAGCGTATTC
rJMFF004A05+ CAATTGCCACTGCTAGGTTTGATGCTCAGACTGGTGCTGATAGAGAAGTTCAGCGTATTC
rJMFF031A12+ CAATTGCCACTGCTAGGTTTGATGCTCAGACTGGTGCTGATAGAGAAGTTCAGCGTATTC
rJMFF007K02+ CAATTGCCACTGCTAGGTTTGATGCTCAGACTGGTGCTGATAGAGAAGTTCAGCGTATTC
rJMFF029J03+ CAATTGCCACTGCTAGGTTTGATGCTCAGACTGGTGCTGATAGAGAAGTTCAGCGTATTC
rJMSF039G10+ CAATTGCCACTGCTAGGTTTGATGCTCAGACTGGTGCTGATAGAGAAGTTCAGCGTATTC
                      ____________________________________________________________
consensus CAATTGCCACTGCTAGGTTTGATGCTCAGACTGGTGCTGATAGAGAAGTTCAGCGTATTC
 
. : . : . : . : . : . :
rJMFF012O05+ TAATGGAGTTGTTGAATCAGATGGATGGGTTTGACCAGACTGTCAACGTGAAAGTTATAA
rJMSF041A24+ TAATGGAGTTGTTGAATCAGATGGATGGGTTTGACCAGACTGTCAACGTGAAAGTTATAA
rJMFF013F01+ TAATGGAGTTGTTGAATCAGATGGATGGGTTTGACCAGACTGTCAACGTGAAAGTTATAA
rJMFF024B02+ TAATGGAGTTGTTGAATCAGATGGATGGGTTTGACCAGACTGTCAACGTGAAAGTTATAA
rJMFF004A05+ TAATGGAGTTGTTGAATCAGATGGATGGGTTTGACCAGACTGTCAACGTGAAAGTTATAA
rJMFF031A12+ TAATGGAGTTGTTGAATCAGATGGATGGGTTTGACCAGACTGTCAACGTGAAAGTTATAA
rJMFF007K02+ TAATGGAGTTGTTGAATCAGATGGATGGGTTTGACCAGACTGTCAACGTGAAAGTTATAA
rJMFF029J03+ TAATGGAGTTGTTGAATCAGATGGATGGGTTTGACCAGACTGTCAACGTGAAAGTTATAA
rJMFF043C18+ TGTTGAATCAGATGGATGGGTTTGACCAGACTGTCAACGTGAAAGTTATAA
rJMSF039G10+ TAATGGAGTTGTTGAATCAGATGGATGGGTTTGACCAGACTGTCAACGTGAAAGTTATAA
rJMFF043G18+ GGATGGGTTTGACCAGACTGTCAACGTGAAAGTTATAA
                      ____________________________________________________________
consensus TAATGGAGTTGTTGAATCAGATGGATGGGTTTGACCAGACTGTCAACGTGAAAGTTATAA
 
. : . : . : . : . : . :
rJMFF012O05+ TGGCAACTAATCAAGCAGACACATTGGACCCTGCACTTCTGCGTCCTGGAAGGCTTGATC
rJMSF041A24+ TGGCAACTAATCGAGCAGACACATTGGACCCTGCACTTCTGCGTCCTGGAAGGCTTGATC
rJMFF013F01+ TGGCAACTAATCGAGCAGACACATTGGACCCTGCACTTCTGCGTCCTGGAAGGCTTGATC
rJMSF006L04+ GATC
rJMFF024B02+ TGGCAACTAATCGAGCAGACACATTGGACCCTGCACTTCTGCGTCCTGGAAGGCTTGATC
rJMFF004A05+ TGGCAACTAATCGAGCAGACACATTGGACCCTGCACTTCTGCGTCCTGGAAGGCTTGATC
rJMFF031A12+ TGGCAACTAATCGAGCAGACACATTGGACCCTGCACTTCTGCGTCCTGGAAGGCTTGATC
rJMFF007K02+ TGGCAACTAATCGAGCAGACACATTGGACCCTGCACTTCTGCGTCCTGGAAGGCTTGATC
rJMFF029J03+ TGGCAACTAATCGAGCAGACACATTGGACCCTGCACTTCTGCGTCCTGGAAGGCTTGATC
rJMFF043C18+ TGGCAACTAATCGAGCAGACACATTGGACCCTGCACTTCTGCGTCCTGGAAGGCTTGATC
rJMSF039G10+ TGGCAACTAATCGAGCAGACACATTGGACCCTGCACTTCTGCGTCCTGGAAGGCTTGATC
rJMFF043G18+ TGGCAACTAATCGAGCAGACACATTGGACCCTGCACTTCTGCGTCCTGGAAGGCTTGATC
                      ____________________________________________________________
consensus TGGCAACTAATCGAGCAGACACATTGGACCCTGCACTTCTGCGTCCTGGAAGGCTTGATC
 
. : . : . : . : . : . :
rJMFF012O05+ GGAAGATTGAATTTCCATTGCCAGATAGGCGTCAAAAGAGGCTTGTGTTTCAGGTGTGTA
rJMSF041A24+ GGAAGATTGAATTTCCATTGCCAGATAGGCGTCAAAAGAGGCTTGTGTTTCAGGTGTGTA
rJMFF013F01+ GGAAGATTGAATTTCCATTGCCAGATAGGCGTCAAAAGAGGCTTGTGTTTCAGGTGTGTA
rJMSF006L04+ GGAAGATTGAATTTCCATGGCCAGATAGGCGTCAAAAGAGGCTTGTGTNTCAGGTGTGTA
rJMFF024B02+ GGAAGATTGAATTTCCATTGCCAGATAGGCGTCAAAAGAGGCTTGTGTTTCAGGTGTGTA
rJMFF004A05+ GGAAGATTGAATTTCCATTGCCAGATAGGCGTCAAAAGAGGCTTGTGTTTCAGGTGTGTA
rJMFF031A12+ GGAAGATTGAATTTCCATTGCCAGATAGGCGTCAAAAGAGGCTTGTGTTTCAGGTGTGTA
rJMFF007K02+ GGAAGATTGAATTTCCATTGCCAGATAGGCGTCAAAAGAGGCTTGTGTTTCAGGTGTGTA
rJMFF029J03+ GGAAGATTGAATTTCCATTGCCAGATAGGCGTCAAAAGAGGCTTGTGTTTCAGGTGTGTA
rJMFF043C18+ GGAAGATTGAATTTCCATTGCCAGATAGGCGTCAAAAGAGGCTTGTGTTTCAGGTGTGTA
rJMSF039G10+ GGAAGATTGAATTTCCATTGCCAGATAGGCGTCAAAAGAGGCTTGTGTTTCAGGTGTGTA
rJMFF043G18+ GGAAGATTGAATTTCCATTGCCAGATAGGCGTCAAAAGAGGCTTGTGTTTCAGGTGTGTA
                      ____________________________________________________________
consensus GGAAGATTGAATTTCCATTGCCAGATAGGCGTCAAAAGAGGCTTGTGTTTCAGGTGTGTA
 
. : . : . : . : . : . :
rJMFF012O05+ CTGCTAAGATGAATTTAGGTGATGAGGTAGACTTGGAGGACTATGTTTCCAGACCTGATA
rJMSF041A24+ CTGCTAAGATGAATTTAGGTGATGAGGTAGACTTGGAGGACTATGTTTCCAGACCTGATA
rJMFF013F01+ CTGCTAAGATGAATTTAGGTGATGAGGTAGACTTGGAGGACTATGTTTCCAGACCTGATA
rJMSF006L04+ CTGCTAAGATGAATTTAGGTGATGAGGTAGACTTGGAGGACTATGTNTCCAGACCTGATA
rJMFF038A01+ GATA
rJMFF024B02+ CTGCTAAGATGAATTTAGGTGATGAGGTAGACTTGGAGGACTATGTTTCCAGACCTGATA
rJMFF004A05+ CTGCTAAGATGAATTTAGGTGATGAGGTAGACTTGGAGGACTATGTTTCCAGACCTGATA
rJMFF031A12+ CTGCTAAGATGAATTTAGGTGATGAGGTAGACTTGGAGGACTATGTTTCCAGACCTGATA
rJMFF007K02+ CTGCTAAGATGAATTTAGGTGATGAGGTAGACTTGGAGGACTATGTTTCCAGACCTGATA
rJMFF029J03+ CTGCTAAGATGAATTTAGGTGATGAGGTAGACTTGGAGGACTATGTTTCCAGACCTGATA
rJMFF043C18+ CTGCTAAGATGAATTTAGGTGATGAGGTAGACTTGGAGGACTATGTTTCCAGACCTGATA
rJMSF039G10+ CTGCTAAGATGAATTTAGGTGATGAGGTAGACTTGGAGGACTATGTTTCCAGACCTGATA
rJMFF043G18+ CTGCTAAGATGAATTTAGGTGATGAGGTAGACTTGGAGGACTATGTTTCCAGACCTGATA
                      ____________________________________________________________
consensus CTGCTAAGATGAATTTAGGTGATGAGGTAGACTTGGAGGACTATGTTTCCAGACCTGATA
 
. : . : . : . : . : . :
rJMFF012O05+ AGATCAGTGCTGCTGAGATAGCCGCTATTTGTCAAGAAGCGGGAATGCATGCAGTGCGCA
rJMSF041A24+ AGATCAGTGCTGCTGAGATAGCCGCTATTTGTCAAGAAGCGGGAATGCATGCAGTGCGCA
rJMFF013F01+ AGATCAGTGCTGCTGAGATAGCCGCTATTTGTCAAGAAGCGGGAATGCATGCAGTGCGCA
rJMSF006L04+ AGATCAGTGCTGCTGAGATAGCCGCTATTTGTCAAGAAGCGGGAATGCATGCAGTGCGCA
rJMFF038A01+ AGATCAGTGCTGCTGAGATAGCCGCTATTTGTCAAGAAGCGGGAATGCATGCAGTGCGCA
rJMFF024B02+ AGATCAGTGCTGCTGAGATAGCCGCTATTTGTCAAGAAGCGGGAATGCATGCAGTGCGCA
rJMFF004A05+ AGATCAGTGCTGCTGAGATAGCCGCTATTTGTCAAGAAGCGGGAATGCATGCAGTGCGCA
rJMFF031A12+ AGATCAGTGCTGCTGAGATAGCCGCTATTTGTCAAGAAGCGGGAATGCATGCAGTGCGCA
rJMFF007K02+ AGATCAGTGCTGCTGAGATAGCCGCTATTTGTCAAGAAGCGGGAATGCATGCAGTGCGCA
rJMFF029J03+ AGATCAGTGCTGCTGAGATAGCCGCTATTTGTCAAGAAGCGGGAATGCATGCAGTGCGCA
rJMFF043C18+ AGATCAGTGCTGCTGAGATAGCCGCTATTTGTCAAGAAGCGGGAATGCATGCAGTGCGCA
rJMSF039G10+ AGATCAGTGCTGCTGAGATAGCCGCTATTTGTCAAGAAGCGGGAATGCATGCAGTGCGCA
rJMFF043G18+ AGATCAGTGCTGCTGAGATAGCCGCTATTTGTCAAGAAGCGGGAATGCATGCAGTGCGCA
                      ____________________________________________________________
consensus AGATCAGTGCTGCTGAGATAGCCGCTATTTGTCAAGAAGCGGGAATGCATGCAGTGCGCA
 
. : . : . : . : . : . :
rJMFF012O05+ AGAACCGGTATGTTATCCTCCCCAAGGACTTCGAGAAGGGCTACAGGACAAATGTTAAGA
rJMSF041A24+ AGAACCGGTATGTTATCCTCCCCAAGGACTTCGAGAAGGGCTACAGGACAAATGTTAAGA
rJMFF013F01+ AGAACCGGTATGTTATCCTCCCCAAGGACTTCGAGAAGGGCTACAGGACAAATGTTAAGA
rJMSF006L04+ AGAACCGGTATGTTATCCTCCCCAAGGACTTCGAGAAGGGCTACAGGACAAATGTTAAGA
rJMFF038A01+ AGAACCGGTATGTTATCCTCCCCAAGGACTTCGAGAAGGGCTACAGGACAAATGTTAAGA
rJMFF024B02+ AGAACCGGTATGTTATCCTCCCCAAGGACTTCGAGAAGGGCTACAGGACAAATGTTAAGA
rJMFF004A05+ AGAACCGGTATGTTATCCTCCCCAAGGACTTCGAGAAGGGCTACAGGACAAATGTTAAGA
rJMFF031A12+ AGAACCGGTATGTTATCCTCCCCAAGGACTTCGAGAAGGGCTACAGGACAAATGTTAAGA
rJMFF007K02+ AGAACCGGTATGTTATCCTCCCCAAGGACTTCGAGAAGGGCTACAGGACAAATGTTAAGA
rJMFF029J03+ AGAACCGGTATGTTATCCTCCCCAAGGACTTCGAGAAGGGCTACAGGACAAATGTTAAGA
rJMFF043C18+ AGAACCGGTATGTTATCCTCCCCAAGGACTTCGAGAAGGGCTACAGGACAAATGTTAAGA
rJMSF039G10+ AGAACCGGTATGTTATCCTCCCCAAGGACTTCGAGAAGGGCTACAGGACAAATGTTAAGA
JMFF036B13- GACAAATGTTAAGA
rJMFF036B13+ GACAAATGTTAAGA
rJMFF043G18+ AGAACCGGTATGTTATCCTCCCCAAGGACTTCGAGAAGGGCTACAGGACAAATGTTAAGA
                      ____________________________________________________________
consensus AGAACCGGTATGTTATCCTCCCCAAGGACTTCGAGAAGGGCTACAGGACAAATGTTAAGA
 
. : . : . : . : . : . :
rJMFF012O05+ AGCCTGATACAGACTTTGAATTCTACAAGTAAAAATCCGGTAGGAGCCGAGAAGAGAGTC
rJMSF041A24+ AGCCTGATACAGACTTTGAATTCTACAAGTAAAAATCCGGTAGGAGCCGAGAAGAGAGTC
rJMFF013F01+ AGCCTGATACAGACTTTGAATTCTACAAGTAAAAATCCGGTAGGAGCCGAGAAGAGAGTC
rJMSF006L04+ AGCCTGATACAGACTTTGAATTCTACAAGTAAAAATCCGGTAGGAGCCGAGAAGAGAGTC
rJMFF038A01+ AGCCTGATACAGACTTTGAATTCTACAAGTAAAAATCCGGTAGGAGCCGAGAAGAGAGTC
rJMFF024B02+ AGCCTGATACAGACTTTGAATTCTACAAGTAAAAATCCGGTAGGAGCCGAGAAGAGAGTC
rJMFF004A05+ AGCCTGATACAGACTTTGAATTCTACAAGTAAAAATCCGGTAGGAGCCGAGAAGAGAGTC
rJMFF031A12+ AGCCTGATACAGACTTTGAATTCTACAAGTAAAAATCCGGTAGGAGCCGAGAAGAGAGTC
rJMFF007K02+ AGCCTGATACAGACTTTGAATTCTACAAGTAAAAATCCGGTAGGAGCCGAGAAGAGAGTC
rJMFF029J03+ AGCCTGATACAGACTTTGAATTCTACAAGTAAAAATCCGGTAGGAGCCGAGAAGAGAGTC
rJMFF043C18+ AGCCTGATACAGACTTTGAATTCTACAAGTAAAAATCCGGTAGGAGCCGAGAAGAGAGTC
rJMSF039G10+ AGCCTGATACAGACTTTGAATTCTACAAGTAAAAATCCGGTAGGAGCCGAGAAGAGAGTC
JMFF036B13- AGCCTGATACAGACTTTGAATTCTACAAGTAAAAATCCGGTAGGAGCCGAGAAGAGAGTC
rJMFF036B13+ AGCCTGATACAGACTTTGAATTCTACAAGTAAAAATCCGGTAGGAGCCGAGAAGAGAGTC
rJMFF043G18+ AGCCTGATACAGACTTTGAATTCTACAAGTAAAAATCCGGTAGGAGCCGAGAAGAGAGTC
                      ____________________________________________________________
consensus AGCCTGATACAGACTTTGAATTCTACAAGTAAAAATCCGGTAGGAGCCGAGAAGAGAGTC
 
. : . : . : . : . : . :
rJMFF012O05+ CAGCCATATATGTGCCTGCTAAAAATTTTAATGGATAACTTTTCAGGAATGCAAACATGC
rJMSF041A24+ CAGCCATATATGTGCCTGCTAAAAATTTTAATGGATAACTTTTCAGGAATGCAAACATGC
rJMFF013F01+ CAGCCATATATGTGCCTGCTAAAAATTTTAATGGATAACTTTTCAGGAATGCAAACATGC
rJMSF006L04+ CAGCCATATATGTGCCTGCTAAAAATTTTAATGGATAACTTTTCAGGAATGCAAACATGC
rJMFF038A01+ CAGCCATATATGTGCCTGCTAAAAATTTTAATGGATAACTTTTCAGGAATGCAAACATGC
rJMFF024B02+ CAGCCATATATGTGCCTGCTAAAAATTTTAATGGATAACTTTTCAGGAATGCAAACATGC
rJMFF004A05+ CAGCCATATATGTGCCTGCTAAAAATTTTAATGGATAACTTTTCAGGAATGCAAACATGC
rJMFF031A12+ CAGCCATATATGTGCCTGCTAAAAATTTTAATGGATAACTTTTCAGGAATGCAAACATGC
rJMFF007K02+ CAGCCATATATGTGCCTGCTAAAAATTTTAATGGATAACTTTTCAGGAATGCAAACATGC
rJMFF029J03+ CAGCCATATATGTGCCTGCTAAAAATTTTAATGGATAACTTTTCAGGAATGCAAACATGC
rJMFF043C18+ CAGCCATATATGTGCCTGCTAAAAATTTTAATGGATAACTTTTCAGGAATGCAAACATGC
rJMSF039G10+ CAGCCATATATGTGCCTGCTAAAAATTTTAATGGATAACTTTTCAGGAATGCAAACATGC
JMFF036B13- CAGCCATATATGTGCCTGCTAAAAATTTTAATGGATAACTTTTCAGGAATGCAAACATGC
rJMFF036B13+ CAGCCATATATGTGCCTGCTAAAAATTTTAATGGATAACTTTTCAGGAATGCAAACATGC
rJMFF043G18+ CAGCCATATATGTGCCTGCTAAAAATTTTAATGGATAACTTTTCAGGAATGCAAACATGC
                      ____________________________________________________________
consensus CAGCCATATATGTGCCTGCTAAAAATTTTAATGGATAACTTTTCAGGAATGCAAACATGC
 
. : . : . : . : . : . :
rJMFF012O05+ TGCTTATGTATTTTAGAACCTTTGTCTTTCGCCATCCATGAATTGATGATTTAAAGAACA
rJMSF041A24+ TGCTTATGTATTTTAGAACCTTTGTCTTTCGCCATCCATGAATCGATGATTTAAAGAACA
rJMFF013F01+ TGCTTATGTATTTTAGAACCTTTGTCTTTCGCCATCCATGAATTGATGATTTAAAGAACA
rJMSF006L04+ TGCTTATGTATTTTAGAACCTT
rJMFF038A01+ TGCTTATGTATTTTAGAACCTTTGTCTTTCGCCATCCATGAATTGATGATTTAAAGAACA
rJMFF024B02+ TGCTTATGTATTTTAGAACCTTTGTCTTTCGCCATCCATGAATTGATGATTTAAAGAACA
rJMFF004A05+ TGCTTATGTATTTTAGAACCTTTGTCTTTCGCCATCCATGAATTGATGATTTAAAGAACA
rJMFF031A12+ TGCTTATGTATTTTAGAACCTTTGTCTTTCGCCATCCATGAATTGATGATTTAAAGAACA
rJMFF007K02+ TGCTTATGTATTTTAGAACCTTTGTCTTTCGCCATCCATGAATTGATGATTTAAAGAACA
rJMFF029J03+ TGCTTATGTATTTTAGAACCTTTGTCTTTCGCCATCCATGAATTGATGATTTAAAGAACA
rJMFF043C18+ TGCTTATGTATTTTAGAACCTTTGTCTTTCGCCATCCATGAATTGATGATTTAAAGAACA
rJMSF039G10+ TGCTTATGTATTTTAGAACCTTTGTCTTTCGCCATCCATGAATTGATGATTTAAAGAACA
JMFF036B13- TGCTTATGTATTTTAGAACCTTTGTCTTTCGCCATCCATGAATTGATGATTTAAAGAACA
rJMFF036B13+ TGCTTATGTATTTTAGAACCTTTGTCTTTCGCCATCCATGAATTGATGATTTAAAGAACA
rJMFF043G18+ TGCTTATGTATTTTAGAACCTTTGTCTTTCGCCATCCATGAATTGATGATTTAAAGAACA
                      ____________________________________________________________
consensus TGCTTATGTATTTTAGAACCTTTGTCTTTCGCCATCCATGAATTGATGATTTAAAGAACA
 
. : . : . : . : . : . :
rJMFF012O05+ CTTGGATTGTTATTTTCTCTCAAAGGATACTGTATAAATTAGTGCATTCATGTGTTGCCC
rJMSF041A24+ CTTGGATTGTTATTTTCTCTCAAAGGATACTGTATAAATT
rJMFF013F01+ CTTGGATTGTTATTTTCTCTCAAAGGATACTGTATAAATTAGTGCATTCAT
rJMFF038A01+ CTTGGATTGTTATTTTCTCTCAAAGGATACTGTATAAATTAGTGCATTCATGTGT
rJMFF024B02+ CTTGGATTGTTATTTTCTCTCAAAGGATACTGTATAAATTAGTGCATTCATGTGTTGCCC
rJMFF004A05+ CTTGGATTGTTATTTTCTCTCAAAGGATACTGTATAAATTAG
rJMFF031A12+ CTTGGATTGTTATTTTCTCTCAAAGGATACTGTATAAATTA
rJMFF007K02+ CTTGGATTGTTATTTTCTCTCAAAGGATACTG
rJMFF029J03+ CTTGGATTGTTATTTTCTCTCAAAGGATACTGTATAAATTAGTGCATTCATGTGTTGCCC
rJMFF043C18+ CTTGGATTGTTATTTTCTCTCAAAGGATACTGTATAAATTAGTGCATTCATGTGTTGCCC
rJMSF039G10+ CTTGGATTGTTATTTTCTCTCAAAGGATACTGTATAAATTAGTGCATTCATGTGTTGCCC
JMFF036B13- CTTGGATTGTTATTTTCTCTCAAAGGATACTGTATAAATTAGTGCATTCATGTGTTGCCC
rJMFF036B13+ CTTGGATTGTTATTTTCTCTCAAAGGATACTGTATAAATTAGTGCATTCATGTGTTGCCC
rJMFF043G18+ CTTGGATTGTTATTTTCTCTCAAAGGATACTGTATAAATTAGTGCATTCATGTGTTGCCC
                      ____________________________________________________________
consensus CTTGGATTGTTATTTTCTCTCAAAGGATACTGTATAAATTAGTGCATTCATGTGTTGCCC
 
. : . : . : . : . : . :
rJMFF012O05+ T
rJMFF024B02+ TT
rJMFF029J03+ TTTT
rJMFF043C18+ TTTTAATCTAA
rJMSF039G10+ TTTTAATCTAA
JMFF036B13- TTTTAATCTAA
rJMFF036B13+ T
rJMFF043G18+ TTTTAATCTAAAAAAAAAGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus TTTTAATCTAAAAAAAAAGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG