clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF018J23 | Sequence | 512 | 000233 (3) | ref|XP_009590317.1| | 1e-41 | PREDICTED: serine carboxypeptidase-like 26 [Nicotiana tomentosiformis] | 743 | 002662 (4) | emb|CBI32445.3| | 3e-94 | unnamed protein product [Vitis vinifera] |
JMFF036N04 | Sequence | 575 | 000233 (3) | ref|XP_009590317.1| | 2e-57 | PREDICTED: serine carboxypeptidase-like 26 [Nicotiana tomentosiformis] | 600 | 002662 (4) | emb|CBI32445.3| | 3e-76 | unnamed protein product [Vitis vinifera] |
JMFF041J17 | Sequence | 659 | 000233 (3) | ref|XP_009590317.1| | 5e-75 | PREDICTED: serine carboxypeptidase-like 26 [Nicotiana tomentosiformis] | 647 | 002662 (4) | emb|CBI32445.3| | 3e-81 | unnamed protein product [Vitis vinifera] |
JMFS079B02 | Sequence | 618 | 002662 (4) | emb|CBI32445.3| | 1e-90 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
JMFS079B02- GAGAACTAGTTCTTGGTAAATTGGTTCAAGAGA
____________________________________________________________
consensus GAGAACTAGTTCTTGGTAAATTGGTTCAAGAGA
. : . : . : . : . : . :
JMFS079B02- TTCCCACATTACAAGACTAGGGATTTCTACATTATGGGAGAAAGCTATGCAGGGTATTAC
____________________________________________________________
consensus TTCCCACATTACAAGACTAGGGATTTCTACATTATGGGAGAAAGCTATGCAGGGTATTAC
. : . : . : . : . : . :
JMFS079B02- ATCCCCGAGCTAGCTGATATAGTTGTCAAGAGGAATACGATGCCCGGGGCAACGTTAAAG
____________________________________________________________
consensus ATCCCCGAGCTAGCTGATATAGTTGTCAAGAGGAATACGATGCCCGGGGCAACGTTAAAG
. : . : . : . : . : . :
JMFS079B02- ATCCAACTCAAGGGAGTTATGATAGGTAATGGGATAATGAATGATGCCACGGACATTAGA
____________________________________________________________
consensus ATCCAACTCAAGGGAGTTATGATAGGTAATGGGATAATGAATGATGCCACGGACATTAGA
. : . : . : . : . : . :
JMFS079B02- GGACGCTATGACTATTTCTGGAGCCACGCCCTAATTTCAGACGAAACTCACCGGGGGCTG
rJMFF018J23+ TTCTGGAGCCACGCCTTAATTTCAGACGAAACTCACCGGGGGCTG
____________________________________________________________
consensus GGACGCTATGACTATTTCTGGAGCCACGCCTTAATTTCAGACGAAACTCACCGGGGGCTG
. : . : . : . : . : . :
JMFS079B02- GTGGAGCAGTGTCTGGGGAATGTGAGCAAAACATGTGAACATTTTGAAATAGCAGCAGGG
rJMFF018J23+ GTGGAGCAGTGTCTGGGGAATGTGAGCAAAACATGTGAACATTTTGAAATAGCAGCAGGG
____________________________________________________________
consensus GTGGAGCAGTGTCTGGGGAATGTGAGCAAAACATGTGAACATTTTGAAATAGCAGCAGGG
. : . : . : . : . : . :
JMFS079B02- GGTGAGGTTGGAGGAATAGATTATTACAACATCTATGGCCCTTTGTGTTTGGATTCCAAG
rJMFF036N04+ CCCTTTGTGTTTGGATTCCAAG
rJMFF018J23+ GGTGAGGTTGGAGGAATAGATTATTACAACATCTATGGCCCTTTGTGTTTGGATTCCAAG
rJMFF041J17+ GAATAGATTATTACAACATCTATGGCCCTTTGTGTTTGGATTCCAAG
____________________________________________________________
consensus GGTGAGGTTGGAGGAATAGATTATTACAACATCTATGGCCCTTTGTGTTTGGATTCCAAG
. : . : . : . : . : . :
JMFS079B02- AATTCGAGGAAGGTACATCGGAATCTGGAATTCGATCCTTGTGAAGGAAACTATGTTCAC
rJMFF036N04+ AATTCGAGGAAGGTACATCGGAATCTGGAATTCGATCCTTGTGAAGGAAACTATGTTCAC
rJMFF018J23+ AATTCGAGGAAGGTACATCGGAATCTGGAATTCGATCCTTGTGAAGGAAACTATGTTCAC
rJMFF041J17+ AATTCGAGGAAGGTACATCGGAATCTGGAATTCGATCCTTGTGAAGGAAACTATGTTCAC
____________________________________________________________
consensus AATTCGAGGAAGGTACATCGGAATCTGGAATTCGATCCTTGTGAAGGAAACTATGTTCAC
. : . : . : . : . : . :
JMFS079B02- ACTTATCTCAATCTCCATATGGTTCAAGAGGCCTTGCATGCCAACAGGACCAAGCTTCCT
rJMFF036N04+ ACTTATCTCAATCTCCATATGGTTCAAGAGGCCTTGCATGCCAACAGGACCAAGCTTCCT
rJMFF018J23+ ACTTATCTCAATCTCCATATGGTTCAAGAGGCCTTGCATGCCAACAGGACCAAGCTTCCT
rJMFF041J17+ ACTTATCTCAATCTCCATATGGTTCAAGAGGCCTTGCATGCCAACAGGACCAAGCTTCCT
____________________________________________________________
consensus ACTTATCTCAATCTCCATATGGTTCAAGAGGCCTTGCATGCCAACAGGACCAAGCTTCCT
. : . : . : . : . : . :
JMFS079B02- TACACTTGGGAACTCTGCAGTGATATCATCCCAACTTGGAAAGACAGCCCATCAACCATG
rJMFF036N04+ TACACTTGGGAACTCTGCAGTGATATCATCCCAACTTGGAAAGACAGCCCATCAACCATG
rJMFF018J23+ TACACTTGGGAACTCTGCAGTGATATCATCCCAACTTGGAAAGACAGCCCATCAACCATG
rJMFF041J17+ TACACTTGGGAACTCTGCAGTGATATCATCCCAACTTGGAAAGACAGCCCATCAACCATG
____________________________________________________________
consensus TACACTTGGGAACTCTGCAGTGATATCATCCCAACTTGGAAAGACAGCCCATCAACCATG
. : . : . : . : . : . :
JMFS079B02- TACCCAATATACAGGAGGTTAATAACATCTGGCCTNCAAATACTT
rJMFF036N04+ TACCCAATATACAGGAGGTTAATAACATCTGGCCTCCAAATACTTCTGTTTAGCGGCGAT
rJMFF018J23+ TACCCAATATACAGGAGGTTAATAACATCTGGCCTCCAAATACTTCTGTTTAGCGGCGAT
rJMFF041J17+ TACCCAATATACAGGAGGTTAATAACATCTGGCCTCCAAATACTTCTGTTTAGCGGCGAT
____________________________________________________________
consensus TACCCAATATACAGGAGGTTAATAACATCTGGCCTCCAAATACTTCTGTTTAGCGGCGAT
. : . : . : . : . : . :
rJMFF036N04+ GTTGATTCAGTAGTGTCAGTGACTGCCACCCGCTATTCCCTGAAAGCTATGAACTTGAAA
rJMFF018J23+ GTTGATTCAGTAGTGTCAGTGACTGCCACCCGCTATTCCCTGAAAGCTATGAACTTGAAA
rJMFF041J17+ GTTGATTCAGTAGTGTCAGTGACTGCCACCCGCTATTCCCTGAAAGCTATGAACTTGAAA
____________________________________________________________
consensus GTTGATTCAGTAGTGTCAGTGACTGCCACCCGCTATTCCCTGAAAGCTATGAACTTGAAA
. : . : . : . : . : . :
rJMFF036N04+ GTGATCGAATCTTGGCATCCATGGAAAGACAACACCAAAGAAGTGGTTGGATACAAAGTG
rJMFF018J23+ GTGATCGAATCTTGGCATCCATGGAAAGACAACACCAAAGAAGTGGTTGGATACAAAGTG
rJMFF041J17+ GTGATCGAATCTTGGCATCCATGGAAAGACAACACCAAAGAAGTGGTTGGATACAAAGTG
____________________________________________________________
consensus GTGATCGAATCTTGGCATCCATGGAAAGACAACACCAAAGAAGTGGTTGGATACAAAGTG
. : . : . : . : . : . :
rJMFF036N04+ GTGTACGAGGGTTTAACTTTCGCCACGGTCAGAGGTGCTGGCCATGAAGTTCCACAGTTT
rJMFF018J23+ GTGTACGAGGGTTTAACTTTCGCCACGGTCAGAGGTGCTGGCCATGAAGTTCCACAGTTT
rJMFF041J17+ GTGTACGAGGGTTTAACTTTCGCCACGGTCAGAGGTGCTGGCCATGAAGTTCCACAGTTT
____________________________________________________________
consensus GTGTACGAGGGTTTAACTTTCGCCACGGTCAGAGGTGCTGGCCATGAAGTTCCACAGTTT
. : . : . : . : . : . :
rJMFF036N04+ AAACCGCGCAGAGCTTTCGCCTTGCTGGAGATGTTCCTAGCCAACAATCACCATTAGAAT
rJMFF018J23+ AAACCGCGCAGAGCTTTCGCCTTGCTGGAGATGTTCCTAGCCAACAATCACCATTAGAAT
rJMFF041J17+ AAACCGCGCAGAGCTTTCGCCTTGCTGGAGATGTTCCTAGCCAACAATCACCATTAGAAT
____________________________________________________________
consensus AAACCGCGCAGAGCTTTCGCCTTGCTGGAGATGTTCCTAGCCAACAATCACCATTAGAAT
. : . : . : . : . : . :
rJMFF036N04+ TGGAAATTGGAATCAATGCAATATTTCCTCTCATTTTCTAGTGATAATAAGATAGTTTAG
rJMFF018J23+ TGGAAATTGGAATCAATGCAATATTTCCTCTCATTTTCTAGTGATAATAAGATAGTTTAG
rJMFF041J17+ TGGAAATTGGAATCAATGCAATATTTCCTCTCATTTTCTAGTGATAATAAGATAGTTTAG
____________________________________________________________
consensus TGGAAATTGGAATCAATGCAATATTTCCTCTCATTTTCTAGTGATAATAAGATAGTTTAG
. : . : . : . : . : . :
rJMFF036N04+ CAGTTTGTAATGCAGTATTGCAGACAGATATTCCGGCT
rJMFF018J23+ CAGTTTGTAATGCAGTATTGCAGACAGATATTCCGGCT
rJMFF041J17+ CAGTTTGTAATGCAGTATTGCAGACAGATATTCCGGCTTAATTTCCACTTGTTTTGTCAC
____________________________________________________________
consensus CAGTTTGTAATGCAGTATTGCAGACAGATATTCCGGCTTAATTTCCACTTGTTTTGTCAC