Contig 002655:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035G20Sequence575007450 (4)ref|XP_011099633.1|6e-44PREDICTED: tubby-like F-box protein 5 [Sesamum indicum]637002655 (4)ref|XP_004232417.1|8e-61PREDICTED: tubby-like F-box protein 5 [Solanum lycopersicum] ref|XP_010316378.1|
JMFF040H16Sequence535007450 (4)ref|XP_011099633.1|1e-25PREDICTED: tubby-like F-box protein 5 [Sesamum indicum]688002655 (4)ref|XP_004232417.1|3e-65PREDICTED: tubby-like F-box protein 5 [Solanum lycopersicum] ref|XP_010316378.1|
JMFF041I02Sequence639007450 (4)ref|XP_011099633.1|3e-58PREDICTED: tubby-like F-box protein 5 [Sesamum indicum]615002655 (4)ref|NP_001266362.1|5e-55uncharacterized protein LOC101202709 [Zea mays] gb|ACF80993.1| unknown [Zea mays
JMSF024L18Sequence643007450 (4)ref|XP_011099633.1|8e-51PREDICTED: tubby-like F-box protein 5 [Sesamum indicum]765002655 (4)ref|XP_009779244.1|2e-91PREDICTED: tubby-like F-box protein 5 [Nicotiana sylvestris] ref|XP_009779245.1|

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF024L18+ CAAGCAAGTGTCTCCAATANTATCTGCGTGTAAT
                      ____________________________________________________________
consensus CAAGCAAGTGTCTCCAATANTATCTGCGTGTAAT
 
. : . : . : . : . : . :
rJMSF024L18+ TACAGTGTTGCCAGTATTTCCTACGAACTCAATGTCCTACGCACCAGAGGGCCGAGGAGA
                      ____________________________________________________________
consensus TACAGTGTTGCCAGTATTTCCTACGAACTCAATGTCCTACGCACCAGAGGGCCGAGGAGA
 
. : . : . : . : . : . :
rJMSF024L18+ ATGCGATGCATAATGCAATCAATTCCTTTCTCCTCGATTCAGGAGGGGGGCACAGCTCCC
rJMFF035G20+ TCCC
rJMFF040H16+ CTCGATTCAGGAGGGGGGCACAGCTCCC
                      ____________________________________________________________
consensus ATGCGATGCATAATGCAATCAATTCCTTTCTCCTCGATTCAGGAGGGGGGCACAGCTCCC
 
. : . : . : . : . : . :
rJMSF024L18+ ACGCCAACATCATTCCCACAAAGCTTTGATAGAACATCATCGTCCTTAACAGCTTCAATA
rJMFF035G20+ ACGCCAACATCATTCCCACAAAGCTTTGATAGAACATCATCGTCCTTAACAGCTTCAATA
rJMFF041I02+ ACATCATCGTCCTTAACAGCTTCAATA
rJMFF040H16+ ACGCCAACATCATTCCCACAAAGCTTTGATAGAACATCATCGTCCTTAACAGCTTCAATA
                      ____________________________________________________________
consensus ACGCCAACATCATTCCCACAAAGCTTTGATAGAACATCATCGTCCTTAACAGCTTCAATA
 
. : . : . : . : . : . :
rJMSF024L18+ GATAAAAAGCCAGCTGGTGATTTTACGGGCTCTCTAGAGTCAGCACCACCGCCTTCTGAA
rJMFF035G20+ GATAAAAAGCCAGCTGGTGATTTTACGGGCTCTCTAGAGTCAGCACCACCGCCTTCTGAA
rJMFF041I02+ GATAAAAAGCCAGCTGGTGATTTTACGGGCTCTCTAGAGTCAGCACCACCGCCTTCTGAA
rJMFF040H16+ GATAAAAAGCCAGCTGGTGATTTTACGGGCTCTCTAGAGTCAGCACCACCGCCTTCTGAA
                      ____________________________________________________________
consensus GATAAAAAGCCAGCTGGTGATTTTACGGGCTCTCTAGAGTCAGCACCACCGCCTTCTGAA
 
. : . : . : . : . : . :
rJMSF024L18+ GAGCCACTTACCCTAAAAAACAAGGCCCCTAGATGGCACGAACAGTTGCAGTGCTGGTGC
rJMFF035G20+ GAGCCACTTACCCTAAAAAACAAGGCCCCTAGATGGCACGAACAGTTGCAGTGCTGGTGC
rJMFF041I02+ GAGCCACTTACCCTAAAAAACAAGGCCCCTAGATGGCACGAACAGTTGCAGTGCTGGTGC
rJMFF040H16+ GAGCCACTTACCCTAAAAAACAAGGCCCCTAGATGGCACGAACAGTTGCAGTGCTGGTGC
                      ____________________________________________________________
consensus GAGCCACTTACCCTAAAAAACAAGGCCCCTAGATGGCACGAACAGTTGCAGTGCTGGTGC
 
. : . : . : . : . : . :
rJMSF024L18+ CTAAATTTTAAAGGCCGGGTCACAGTGGCTTCGGTTAAAAACTTCCAACTCGTGGCTGCA
rJMFF035G20+ CTAAATTTTAAAGGCCGGGTCACAGTGGCTTCGGTTAAAAACTTCCAACTCGTGGCTGCA
rJMFF041I02+ CTAAATTTTAAAGGCCGGGTCACAGTGGCTTCGGTTAAAAACTTCCAACTCGTGGCTGCA
rJMFF040H16+ CTAAATTTTAAAGGCCGGGTCAAAGTGGCTTCGGTTAAAAACTTCCAACTCGTGGCTGCA
                      ____________________________________________________________
consensus CTAAATTTTAAAGGCCGGGTCACAGTGGCTTCGGTTAAAAACTTCCAACTCGTGGCTGCA
 
. : . : . : . : . : . :
rJMSF024L18+ GTCGACCCGTCTCACAACATCCCAGCTGCAGAACAGGAGAAAGTGATCCTGCAGTTTGGG
rJMFF035G20+ GTCGACCCGTCTCACAACATCCCAGCTGCAGAACAGGAGAAAGTGATCCTGCAGTTTGGG
rJMFF041I02+ GTCGACCCGTCTCACAACATCCCAGCTGCAGAACAGGAGAAAGTGATCCTGCAGTTTGGG
rJMFF040H16+ GTCGACCCGTCTCACAACATCCCAGCTGCAGAACAGGAGAAAGTGATCCTGCAGTTTGGG
                      ____________________________________________________________
consensus GTCGACCCGTCTCACAACATCCCAGCTGCAGAACAGGAGAAAGTGATCCTGCAGTTTGGG
 
. : . : . : . : . : . :
rJMSF024L18+ AAAATCGGGAAGGATATCTTCACCATGGACTATCGCTACCCTCTTTCCGCCTTCCAGGCT
rJMFF035G20+ AAAATCGGGAAGGATATCTTCACCATGGACTATCGCTACCCTCTTTCCGCCTTCCAGGCT
rJMFF041I02+ AAAATCGGGAAGGATATCTTCACCATGGACTATCGCTACCCTCTTTCCGCCTTCCAGGCT
rJMFF040H16+ AAAATCGGGAAGGATATCTTCACCATGGACTATCGCTACCCTCTTTCCGCCTTCCAGGCT
                      ____________________________________________________________
consensus AAAATCGGGAAGGATATCTTCACCATGGACTATCGCTACCCTCTTTCCGCCTTCCAGGCT
 
. : . : . : . : . : . :
rJMSF024L18+ TTTGCCATCTGCTTGAGCAGCTATGACACGAAACTAGCCTGCGAATGATCTTAATGCGGA
rJMFF035G20+ TTTGCCATCTGCTTGAGCAGCTATGACACGAAACTAGCCTGCGAATGATCTTAATGCGGA
rJMFF041I02+ TTTGCCATCTGCTTGAGCAGCTATGACACGAAACTAGCCTGCGAATGATCTTAATGCGGA
rJMFF040H16+ TTTGCCATCTGCTTGAGCAGCTATGACACGAAACTAGCCTGCGAATGATCTTAATGCGGA
                      ____________________________________________________________
consensus TTTGCCATCTGCTTGAGCAGCTATGACACGAAACTAGCCTGCGAATGATCTTAATGCGGA
 
. : . : . : . : . : . :
rJMSF024L18+ TCGTAAATCCTCATCATCTTTTGTTTTTGTTGCTGGTAACACAGTAGAGTTCTCTGTTTA
rJMFF035G20+ TCGTAAATCCTCATCATCTTTTGTTTTTGTTGCTGGTAACACAGTAGAGTTCTCTGTTTA
rJMFF041I02+ TCGTAAATCCTCATCATCTTTTGTTTTTGTTGCTGGTAACACAGTAGAGTTCTCTGTTTA
rJMFF040H16+ TCGTAAATCCTCATCATCTTTTGTTTTTGTTGCTGGTAACACAGTAGAGTTCTCTGTTTA
                      ____________________________________________________________
consensus TCGTAAATCCTCATCATCTTTTGTTTTTGTTGCTGGTAACACAGTAGAGTTCTCTGTTTA
 
. : . : . : . : . : . :
rJMSF024L18+ TTCCCTATAAAAGATGCCACTGCCCATTAATTATTGCTGAGAATAATGCTGCTTAGTAGT
rJMFF035G20+ TTCCCTATAAAAGATGCCACTGCCCATTAATTATTGCTGAGAATAATGCTGCTTAGTAGT
rJMFF041I02+ TTCCCTATAAAAGATGCCACTGCCCATTAATTATTGCTGAGAATAATGCTGCTTAGTAGT
rJMFF040H16+ TTCCCTATAAAAGATGCCACTGCCCATTAATTATTGCTGAGAATAATGCTGCTTAGTAGT
                      ____________________________________________________________
consensus TTCCCTATAAAAGATGCCACTGCCCATTAATTATTGCTGAGAATAATGCTGCTTAGTAGT
 
. : . : . : . : . : . :
rJMSF024L18+ AAGTAGCTTCTTCAGTGTTAGTTGCTCAGATCAAAGGAACTGCTCTTTTACTTCCCTGTT
rJMFF035G20+ AAGTAGCTTCTTCAGTGTTAGTTGCTCAGATCAAAGGAACTGCTCTTTTACTTCCCTGTT
rJMFF041I02+ AAGTAGCTTCTTCAGTGTTAGTTGCTCAGATCAAAGGAACTGCTCTTTTACTTCCCTGTT
rJMFF040H16+ AAGTAGCTTCTTCAGTGTTAGTTGCTCAGATCAAAGGAACTGCTCTTTTACTTCCCTGTT
                      ____________________________________________________________
consensus AAGTAGCTTCTTCAGTGTTAGTTGCTCAGATCAAAGGAACTGCTCTTTTACTTCCCTGTT
 
. : . : . : . : . : . :
rJMSF024L18+ TATTGT
rJMFF035G20+ TATTGTTGAAATTGAGGAAT
rJMFF041I02+ TATTGTTGAAATTGAGGAATTGAGGCAGAAGCTCAATATA
rJMFF040H16+ TATTGTTGAAATTGAGGAATTGAGGCAGAAGCTCAATATAGAAGACCAAAAGACAAAGAG
                      ____________________________________________________________
consensus TATTGTTGAAATTGAGGAATTGAGGCAGAAGCTCAATATAGAAGACCAAAAGACAAAGAG