| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010E24 | Sequence | 469 | 002645 (17) | emb|CDP19552.1| | 5e-12 | unnamed protein product [Coffea canephora] | 445 | 002645 (17) | emb|CDP19552.1| | 4e-12 | unnamed protein product [Coffea canephora] |
| JMFF037D14 | Sequence | 446 | 002645 (17) | emb|CDP19552.1| | 6e-12 | unnamed protein product [Coffea canephora] | 423 | 002645 (17) | emb|CDP19552.1| | 5e-12 | unnamed protein product [Coffea canephora] |
| JMFF039C12 | Sequence | 437 | 002645 (17) | emb|CDP19552.1| | 6e-12 | unnamed protein product [Coffea canephora] | |||||
| JMFF043I10 | Sequence | 459 | 002645 (17) | emb|CDP19552.1| | 4e-12 | unnamed protein product [Coffea canephora] | 487 | 002645 (17) | emb|CDP19552.1| | 5e-12 | unnamed protein product [Coffea canephora] |
| JMFF043P22 | Sequence | 469 | 002645 (17) | emb|CDP19552.1| | 6e-12 | unnamed protein product [Coffea canephora] | 446 | 002645 (17) | emb|CDP19552.1| | 6e-11 | unnamed protein product [Coffea canephora] |
| JMFF045C07 | Sequence | 442 | 002645 (17) | emb|CDP19552.1| | 4e-12 | unnamed protein product [Coffea canephora] | 442 | 002645 (17) | emb|CDP19552.1| | 3e-11 | unnamed protein product [Coffea canephora] |
| JMFF047D05 | Sequence | 364 | 002645 (17) | emb|CBI21837.3| | 9e-13 | unnamed protein product [Vitis vinifera] | 354 | 002645 (17) | emb|CDP19552.1| | 4e-11 | unnamed protein product [Coffea canephora] |
| JMFF048P07 | Sequence | 428 | 002645 (17) | emb|CDP19552.1| | 4e-12 | unnamed protein product [Coffea canephora] | 437 | 002645 (17) | emb|CDP19552.1| | 4e-12 | unnamed protein product [Coffea canephora] |
| JMSF047C06 | Sequence | 374 | 002645 (17) | emb|CBI21837.3| | 9e-13 | unnamed protein product [Vitis vinifera] | 327 | 002645 (17) | emb|CBI21837.3| | 6e-13 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
rJMFF043I10- ACCCTGG
____________________________________________________________
consensus ACCCTGG
. : . : . : . : . : . :
rJMFF048P07- TTTTTTTTTTTTTTACGACAATTTAGCTTGATTTAATCGAATAAAATAATC
rJMFF043I10- AGAGTTTTTTTTTTTTTTTTTGGACGACAATTTAGCTTGATTTAATCGAATAAAATAATC
JMFF043I10+ ACGACAATTTAGCTTGATTTAATCGAATAAAATAATC
JMFF045C07+ GATTTAATCGAATAAAATAATC
rJMFF045C07- GATTTAATCGAATAAAATAATC
rJMFF010E24- ATCGAATAAAATAATC
JMFF039C12+ TTTTTTTTTTACGACAATTTAGCTTGATTTAATCGAATAAAATAATC
JMFF043P22+ AGCTTGATTTAATCGAATAAAATAATC
rJMFF043P22- AGCTTGATTTAATCGAATAAAATAATC
JMFF037D14+ AGCTTGATTTAATCGAATAAAATAATC
JMFF048P07+ TTAATCGAATAAAATAATC
JMFF010E24+ TTTTTTTTGGACGACAATTTAGCTTGATTTAATCGAATAAAATAATC
rJMFF037D14- AATC
____________________________________________________________
consensus AGAGTTTTTTTTTTTTTTTTTTTACGACAATTTAGCTTGATTTAATCGAATAAAATAATC
. : . : . : . : . : . :
rJMFF048P07- ATAACTTACAACAGATCAACAAGATATAAATCCCACAAACTGGAATCCAAACCAAAAATC
rJMFF043I10- ATAACTTACAACAGATCAACAAGATATAAATCCCAAAAACTGGAATCCAAACCAAAAATC
JMFF043I10+ ATAACTTACAACAGATCAACAAGATATAAATCCCAAAAACTGGAATCCAAACCAAAAATC
JMFF045C07+ ATAACTTACAACAGATCAACAAGATATAAATCCCAAAAACTGGAATCCAAACCAAAAATC
rJMFF045C07- ATAACTTACAACAGATCAACAAGATATAAATCCCAAAAACTGGAATCCAAACCAAAAATC
rJMFF010E24- ATAACTTACAACAGATCAACAAGATATAAATCCCAAAAACTGGAATCCAAACCAAAAATC
JMFF039C12+ ATAACTTACAACAGATCAACAAGATATAAATCCCAAAAACTGGAATCCAAACCAAAAATC
JMFF043P22+ ATAACTTACAACAGATCAACAAGATATAAATCCCAAAAACTGGAATCCAAACCAAAAATC
rJMFF043P22- ATAACTTACAACAGATCAACAAGATATAAATCCCAAAAACTGGAATCCAAACCAAAAATC
JMFF037D14+ ATAACTTACAACAGATCAACAAGATATAAATCCCAAAAACTGGAATCCAAACCAAAAATC
JMFF048P07+ ATAACTTACAACAGATCGACAAGATATAAATCCCAAAAACTGGAATCCAAACCAAAAATC
JMFF047D05+ AATC
JMSF047C06+ ATC
rJMFF047D05- AATC
JMFF010E24+ ATAACTTACAACAGATCAACAAGATATAAATCCCAAAAACTGGAATCCAAACCAAAAATC
rJMFF037D14- ATAACTTACAACAGATCAACAAGATATAAATCCCAAAAACTGGAATCCAAACCAAAAATC
____________________________________________________________
consensus ATAACTTACAACAGATCAACAAGATATAAATCCCAAAAACTGGAATCCAAACCAAAAATC
. : . : . : . : . : . :
rJMFF048P07- AAAAATCAAAAATCTATTCAGCCAGATAAAAGAACATTTACCCAGAAAAACACATAGCAG
rJMFF043I10- AAAAATCAAAAATCTATTCAGCCAGATAAAAGAACATTTACCCAGAAAAACACATAGCAG
rJMSF047C06- CATTTACCCAGAAAAACACATAGCAG
JMFF043I10+ AAAAATCAAAAATCTATTCAGCCAGATAAAAGAACATTTACCCAGAAAAACACATAGCAG
JMFF045C07+ AAAAATCAAAAATCTATTCAGCCAGATAAAAGAACATTTACCCAGAAAAACACATAGCAG
rJMFF045C07- AAAAATCAAAAATCTATTCAGCCAGATAAAAGAACATTTACCCAGAAAAACACATAGCAG
rJMFF010E24- AAAAATCAAAAATCTATTCAGCCAGATAAAAGAACATTTACCCAGAAAAACACATAGCAG
JMFF039C12+ AAAAATCAAAAATCTATTCAGCCAGATAAAAGAACATTTACCCAGAAAAACACATAGCAG
JMFF043P22+ AAAAATCAAAAATCTATTCAGCCAGATAAAAGAACATTTACCCAG-AAAACACATAGCAG
rJMFF043P22- AAAAATCAAAAATCTATTCAGCCAGATAAAAGAACATTTACCCAG-AAAACACATAGCAG
JMFF037D14+ AAAAATCAAAAATCTATTCAGCCAGATAAAAGAACATTTACCCAG-AAAACACATAGCAG
JMFF048P07+ AAAAATCAAAAATCTATTCAGCCAGATAAAAGAACATTTACCCAGAAAAACACATAGCAG
JMFF047D05+ AAAAATCAAAAATCTATTCAGCCAGATAAAAGAACATTTACCCAGAAAAACACATAGCAG
JMSF047C06+ AAAAATCAAAAATCTATTCAGCCAGATAAAAGAACATTTACCCAGAAAAACACATAGCAG
rJMFF047D05- AAAAATCAAAAATCTATTCAGCCAGATAAAAGAACATTTACCCAGAAAAACACATAGCAG
JMFF010E24+ AAAAATCAAAAATCTATTCAGCCAGATAAAAGAACATTTACCCAGAAAAACACATAGCAG
rJMFF037D14- AAAAATCAAAAATCTATTCAGCCAGATAAAAGAACATTTACCCAG-AAAACACATAGCAG
____________________________________________________________
consensus AAAAATCAAAAATCTATTCAGCCAGATAAAAGAACATTTACCCAGAAAAACACATAGCAG
. : . : . : . : . : . :
rJMFF048P07- AACAATCAATTCTCAACCAAGAAACGAAACCCCTTTCATATTTCCCAGAAACAGAACTAA
rJMFF043I10- AACAATCAATTCTCAACCAAGAAACGAAACCCCTTTCATATTTCCCAGAAACAGAACTAA
rJMSF047C06- AACAATCAATTCTCAACCAAGAAACGAAACCCCTTTCATATTTCCCAGAAACAGAACTAA
JMFF043I10+ AACAATCAATTCTCAACCAAGAAACGAAACCCCTTTCATATTTCCCAGAAACAGAACTAA
JMFF045C07+ AGCAATCAATTCTCAACCAAGAAACGAAACCCCTTTCATATTTCCCAGAAACAGAACTAA
rJMFF045C07- AGCAATCAATTCTCAACCAAGAAACGAAACCCCTTTCATATTTCCCAGAAACAGAACTAA
rJMFF010E24- AACAATCAATTCTCAACCAAGAAACGAAACCCCTTTCATATTTCCCAGAAACAGAACTAA
JMFF039C12+ AACAATCAATTCTCAACCAAGAAACGAAACCCCTTTCATATTTCCCAGAAACAGAACTAA
JMFF043P22+ AACAATCAATTCTCAACCAAGAAACGAAACCCCTTTCATATTTCCCAGAAACAGAACTAA
rJMFF043P22- AACAATCAATTCTCAACCAAGAAACGAAACCCCTTTCATATTTCCCAGAAACAGAACTAA
JMFF037D14+ AACAATCAATTCTCAACCAAGAAACGAAACCCCTTTCATATTTCCCAGAAACAGAACTAA
JMFF048P07+ AACAATCAATTCTCAACCAAGAAACGAAACCCCTTTCATATTTCCCAGAAACAGAACTAA
JMFF047D05+ AACAATCAATTCTCAACCAAGAAACGAAACCCCTTTCATATTTCCCAGAAACAGAACTAA
JMSF047C06+ AACAATCAATTCTCAACCAAGAAACGAAACCCCTTTCATATTTCCCAGAAACAGAACTAA
rJMFF047D05- AACAATCAATTCTCAACCAAGAAACGAAACCCCTTTCATATTTCCCAGAAACAGAACTAA
JMFF010E24+ AACAATCAATTCTCAACCAAGAAACGAAACCCCTTTCATATTTCCCAGAAACAGAACTAA
rJMFF037D14- AACAATCAATTCTCAACCAAGAAACGAAACCCCTTTCATATTTCCCAGAAACAGAACTAA
____________________________________________________________
consensus AACAATCAATTCTCAACCAAGAAACGAAACCCCTTTCATATTTCCCAGAAACAGAACTAA
. : . : . : . : . : . :
rJMFF048P07- TAAAATGATGAAAACATAAAGGCAAAGACTGTGATGTGATGTGAATGAGCATCTACATAC
rJMFF043I10- TAAAATGATGAAAACATAAAGGCAAAGACTGTGATGTGATGTGAATGAGCATCTACATAC
rJMSF047C06- TAAAATGATGAAAACATAAAGGCAAAGACTGTGATGTGATGTGAATGAGCATCTACATAC
JMFF043I10+ TAAAATGATGAAAACATAAAGGCAAAGACTGTGATGTGATGTGAATGAGCATCTACATAC
JMFF045C07+ TAAAATGATGAAAACATAAAGGCAAAGACTGTGATGTGATGTGAATGAGCATCTACATAC
rJMFF045C07- TAAAATGATGAAAACATAAAGGCAAAGACTGTGATGTGATGTGAATGAGCATCTACATAC
rJMFF010E24- TAAAATGATGAAAACATAAAGGCAAAGACTGTGATGTGATGTGAATGAGCATCTACATAC
JMFF039C12+ TAAAATGATGAAAACATAAAGGCAAAGACTGTGATGTGATGTGAATGAGCATCTACATAC
JMFF043P22+ TAAAATGATGAAAACATAAAGGCAAAGACTGTGATGTGATGTGAATGAGCATCTACATAC
rJMFF043P22- TAAAATGATGAAAACATAAAGGCAAAGACTGTGATGTGATGTGAATGAGCATCTACATAC
JMFF037D14+ TAAAATGATGAAAACATAAAGGCAAAGACTGTGATGTGATGTGAATGAGCATCTACATAC
JMFF048P07+ TAAAATGATGAAAACATAAAGGCAAAGACTGTGATGTGATGTGAATGAGCATCTACATAC
JMFF047D05+ TAAAATGATGAAAACATAAAGGCAAAGACTGTGATGTGATGTGAATGAGCATCTACATAC
JMSF047C06+ TAAAATGATGAAAACATAAAGGCAAAGACTGTGATGTGATGTGAATGAGCATCTACATAC
rJMFF047D05- TAAAATGATGAAAACATAAAGGCAAAGACTGGGATGGGATGGGAATGAGCATCTACATAC
JMFF010E24+ TAAAATGATGAAAACATAAAGGCAAAGACTGTGATGTGATGTGAATGAGCATCTACATAC
rJMFF037D14- TAAAATGATGAAAACATAAAGGCAAAGACTGTGATGTGATGTGAATGAGCATCTACATAC
____________________________________________________________
consensus TAAAATGATGAAAACATAAAGGCAAAGACTGTGATGTGATGTGAATGAGCATCTACATAC
. : . : . : . : . : . :
rJMFF048P07- TACTTCCTGAGGTGCTTGACCTTGTTCCACCCTTTCTTGCAAGACTCTCCCACTACCTTC
rJMFF043I10- TACTTCCTGAGGTGCTTGACCTTGTTCCACCCTTTCTTGCAAGACTCTCCCACTACCTTC
rJMSF047C06- TACTTCCTGAGGTGCTTGACCTTGTTCCACCCTTTCTTGCAAGACTCTCCCACTACCTTC
JMFF043I10+ TACTTCCTGAGGTGCTTGACCTTGTTCCACCCTTTCTTGCAAGACTCTCCCACTACCTTC
JMFF045C07+ TACTTCCTGAGGTGCTTGACCTTGTTCCACCCTTTCTTGCAAGACTCTCCCACTACCTTC
rJMFF045C07- TACTTCCTGAGGGGCTTGACCTTGTTCCACCCTTTCTTGCAAGACTCTCCCACTACCTTC
rJMFF010E24- TACTTCCTGAGGTGCTTGACCTTGTTCCACCCTTTCTTGCAAGACTCTCCCACTACCTTC
JMFF039C12+ TACTTCCTGAGGTGCTTGACCTTGTTCCACCCTTTCTTGCAAGACTCTCCCACTACCTTC
JMFF043P22+ TACTTCCTGAGGTGCTTGACCTTGTTCCACCCTTTCTTGCAAGACTCTCCCACTACCTTC
rJMFF043P22- TACTTCCTGAGGGGCTTGACCTTGTTCCACCCTTTCTTGCAAGACTCTCCCACTACCTTC
JMFF037D14+ TACTTCCTGAGGTGCTTGACCTTGTTCCACCCTTTCTTGCAAGACTCTCCCACTACCTTC
JMFF048P07+ TACTTCCTGAGGTGCTTGACCTTGTTCCACCCTTTCTTGCAAGACTCTCCCACTACCTTC
JMFF047D05+ TACTTCCTGAGGTGCTTGACCTTGTTCCACCCTTTCTTGCAAGACTCTCCCACTACCTTC
JMSF047C06+ TACTTCCTGAGGTGCTTGACCTTGTTCCACCCTTTCTTGCAAGACTCTCCCACTACCTTC
rJMFF047D05- TACTTCCTGAGGGGCTTGACCTTGTTCCACCCTTTCTTGCAAGACTCTCCCACTACCTTC
JMFF010E24+ TACTTCCTGAGGTGCTTGACCTTGTTCCACCCTTTCTTGCAAGACTCTCCCACTACCTTC
rJMFF037D14- TACTTCCTGAGGTGCTTGACCTTGTTCCACCCTTTCTTGCAAGACTCTCCCACTACCTTC
____________________________________________________________
consensus TACTTCCTGAGGTGCTTGACCTTGTTCCACCCTTTCTTGCAAGACTCTCCCACTACCTTC
. : . : . : . : . : . :
rJMFF048P07- ACGCCCTTCTTGAAAAGAGTCGTCAGCTCCTTCGCCCTCTCCTTCACTTGCTTCTCGAAA
rJMFF043I10- ACGCCCTTCTTGAAAAGAGTCGTCAGCTCCTTCGCCCTCTCCTTCACTTGCTTCTCGAAA
rJMSF047C06- ACGCCCTTCTTGAAAAGAGTCGTCAGCTCCTTCGCCCTCTCCTTCACTTGCTTCTCGAAA
JMFF043I10+ ACGCCCTTCTTGAAAAGAGTCGTCAGCTCCTTCGCCCTCTCCTTCACTTGCTTCTCGAAA
JMFF045C07+ ACGCCCTTCTTGAAAAGAGTCGTCAGCTCCTTCGCCCTCTCCTTCACTTGCTTCTCGAAA
rJMFF045C07- ACGCCCTTCTTGAAAAGAGTCGTCAGCTCCTTCGCCCTCTCCTTCACTTGCTTCTCGAAA
rJMFF010E24- ACGCCCTTCTTGAAAAGAGTCGTCAGCTCCTTCGCCCTCTCCTTCACTTGCTTCTCGAAA
JMFF039C12+ ACGCCCTTCTTGAAAAGAGTCGTCAGCTCCTTCGCCCTCTCCTTCACTTGCTTCTCGAAA
JMFF043P22+ ACGCCCTTCTTGAAAAGAGTCGTCAGCTCCTTCGCCCTCTCCTTCACTTGCTTCTCGAAA
rJMFF043P22- ACGCCCTTCTTGAAAAGAGTCGTCAGCTCCTTCGCCCTCTCCTTCACTTGCTTCTCGAAA
JMFF037D14+ ACGCCCTTCTTGAAAAGAGTCGTCAGCTCCTTCGCCCTCTCCTTCACTTGCTTCTCGAAA
JMFF048P07+ ACGCCCTTCTTGAAAAGAGTCGTCAGCTCCTTCGCCCTCTCCTTCACTTGCTTCTCGAAA
JMFF047D05+ ACGCCCTTCTTGAAAAGAGTCGTCAGCTCCTTCGCCCTCTCCTTCACTTGCTTCTCGAAA
JMSF047C06+ ACGCCCTTCTTGAAAAGAGTCGTCAGCTCCTTCGCCCTCTCCTTCACTTGCTTCTCGAAA
rJMFF047D05- ACGCCCTTCTTGAAAAGAGTCGTCAGCTCCTTCGCCCTCTCCTTCACTTGCTTCTCGAAA
JMFF010E24+ ACGCCCTTCTTGAAAAGAGTCGTCAGCTCCTTCGCCCTCTCCTTCACTTGCTTCTCGAAA
rJMFF037D14- ACGCCCTTCTTGAAAAGAGTCGTCAGCTCCTTCGCCCTCTCCTTCACTTGCTTCTCGAAA
____________________________________________________________
consensus ACGCCCTTCTTGAAAAGAGTCGTCAGCTCCTTCGCCCTCTCCTTCACTTGCTTCTCGAAA
. : . : . : . : . : . :
rJMFF048P07- CTCCCCATTTTTCTTC
rJMFF043I10- CTCCCCATTTTTCTTCCACACAAAACACAAATTAAAGAAAATAAGCAATGCAAAGGCTAT
rJMSF047C06- CTCCCCATTTTTCTTCCACACAAAACACAAATTAAAGAAAATAAGCAATGCAAAGGCTA
JMFF043I10+ CTCCCCATTTTTCTTCCACACAAAACACAAATTAAAGAAAATAAGCAATGCAAAGGCTAT
JMFF045C07+ CTCCCCATTTTTCTTCCACACAAAACACAAATTAAAGAAAATAAGCAATGCAAAGGCTAT
rJMFF045C07- CTCCCCATTTTTCTTCCACACAAAACACAAATTAAAGAAAATAAGCAATGCAAAGGCTAT
rJMFF010E24- CTCCCCATTTTTCTTCCACACAAAACACAAATTAAAGAAAATAAGCAATGCAAAGGCTAT
JMFF039C12+ CTCCCCATTTTTCTTCCACACAAAACAC
JMFF043P22+ CTCCCCATTTTTCTTCCACACAAAACGCAAATTAAAGAAAATAAGCAATGCAAAGGCAAT
rJMFF043P22- CTCCCCATTTTTCTTCCACACAAAACGCAAATTAAAGAAAATAAGCAATGCAAAGGCAAT
JMFF037D14+ CTCCCCATTTTTCTTCCACACAAAACGCAAATTAAAGAAAATAAGCAATGCAAAGGCAAT
JMFF048P07+ CTCCCCATTTTTCTTCCACACAAAACAC
JMFF047D05+ CTCCCCATTTTTCTTCCACACAAAACACAAATTAAAGAAAATAAGCAATGCAAAGGCTAT
JMSF047C06+ CTCCCCATTTTTCTTCCACACAAAACACAAATTAAAGAAAATAAGCAATGCAAAGGCTA
rJMFF047D05- CTCCCCATTTTTCTTCCACACAAAACACAAATTAAAGAAAATAAGCAATG
JMFF010E24+ CTCCCCATTTTTCTTCCACACAAAACACAAATTAAAGAAAATAAGCAATGCAAAGGCTAT
rJMFF037D14- CTCCCCATTTTTCTTCCACACAAAACGCAAATTAAAGAAAATAAGCAATGCAAAGGCAAT
____________________________________________________________
consensus CTCCCCATTTTTCTTCCACACAAAACACAAATTAAAGAAAATAAGCAATGCAAAGGCTAT