| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF033G21 | Sequence | 535 | 002627 (13) | ref|XP_006435966.1| | 1e-39 | hypothetical protein CICLE_v10033444mg, partial [Citrus clementina] gb|ESR49206. | 505 | 002627 (13) | ref|XP_006435966.1| | 8e-40 | hypothetical protein CICLE_v10033444mg, partial [Citrus clementina] gb|ESR49206. |
| JMFF046D03 | Sequence | 534 | 002627 (13) | ref|XP_006435966.1| | 1e-39 | hypothetical protein CICLE_v10033444mg, partial [Citrus clementina] gb|ESR49206. | 417 | 002627 (13) | ref|XP_007011399.1| | 2e-11 | Cytochrome b-c1 complex subunit 8 [Theobroma cacao] gb|EOY20209.1| Cytochrome b- |
| JMFN011G09 | Sequence | 507 | 002627 (13) | ref|XP_006435966.1| | 2e-39 | hypothetical protein CICLE_v10033444mg, partial [Citrus clementina] gb|ESR49206. | |||||
| JMFN020I17 | Sequence | 547 | 002627 (13) | ref|XP_004242473.1| | 2e-38 | PREDICTED: cytochrome b-c1 complex subunit 8 [Solanum lycopersicum] | |||||
| JMFN028L18 | Sequence | 504 | 002627 (13) | ref|XP_006435966.1| | 2e-39 | hypothetical protein CICLE_v10033444mg, partial [Citrus clementina] gb|ESR49206. | |||||
| JMFN029B23 | Sequence | 586 | 002627 (13) | ref|XP_006435966.1| | 3e-39 | hypothetical protein CICLE_v10033444mg, partial [Citrus clementina] gb|ESR49206. | |||||
| JMFN029F15 | Sequence | 429 | 002627 (13) | ref|XP_007011399.1| | 4e-09 | Cytochrome b-c1 complex subunit 8 [Theobroma cacao] gb|EOY20209.1| Cytochrome b- | |||||
| JMFN034L13 | Sequence | 527 | 002627 (13) | ref|XP_006435966.1| | 2e-39 | hypothetical protein CICLE_v10033444mg, partial [Citrus clementina] gb|ESR49206. | |||||
| JMFN035B11 | Sequence | 377 | 002627 (13) | ref|XP_010067635.1| | 9e-11 | PREDICTED: cytochrome b-c1 complex subunit 8 [Eucalyptus grandis] gb|KCW65810.1| | |||||
| JMFN039G10 | Sequence | 507 | 002627 (13) | ref|XP_006435966.1| | 1e-39 | hypothetical protein CICLE_v10033444mg, partial [Citrus clementina] gb|ESR49206. | |||||
| JMFS094D04 | Sequence | 390 | 002627 (13) | ref|XP_006435966.1| | 3e-40 | hypothetical protein CICLE_v10033444mg, partial [Citrus clementina] gb|ESR49206. | |||||
This contig is upended
. : . : . : . : . : . :
JMFN029F15- GGGAGAGAACTAGTCTCGAGAGXXXXXXXXXXXXXXXXXXXGAAACTCGAATGCAGAGT
JMFN028L18+ GCAGAGT
JMFN020I17- GCAGAGT
rJMFF046D03- GCAGAGT
JMFN029B23- GCAGAGT
____________________________________________________________
consensus GGGAGAGAACTAGTCTCGAGAGNNNNNNNNNNNNNNNNNNNGAAACTCGAATGCAGAGT
. : . : . : . : . : . :
JMFN029F15- AACTTTTTTTTTTTTCAACCACAATAAGCCATACGTTGTAGGGCTAATTATCAACTAGTC
JMFN028L18+ AACTTTTTTTTTTTTCAACCACAATAAGCCATACATTGTAGGGCTAATTATCAACTAGTC
JMFN039G10+ CCACAATAAGCCATACATTGTAGGGCTAATTATCAACTAGTC
JMFN035B11- TTTTTTTTTTTTCACCACAATAAGCCATACATTGTAGGGCTAATTATCAACTAGTC
JMFN011G09+ TTTTTTTTTTTTCAACCACAATAAGCCATACATTGTAGGGCTAATTATCAACTAGTC
JMFN020I17- AACTTTTTTTTTTTTCAACCACAATAAGCCATACATTGTAGGGCTAATTATCAACTAGTC
rJMFF046D03- AACTTTTTTTTTTTTTAACCACAATAAGCCATACATTGTAGGGCTAATTATCAACTAGTC
JMFN029B23- AACTTTTTTTTTTTTCAACCACAATAAGCCATACATTGTAGGGCTAATTATCAACTAGTC
JMFF046D03+ TTTTTTTTTNAACCACAATAAGCCATACATTGTAGGGCTAATTATCAACTAGTC
JMFF033G21+ TTTTTTTTTTCTACCACAATAAGCCATACATTGTAGGGCTAATTATCAACTAGTC
JMFN034L13+ AGGGCTAATTATCAACTAGTC
rJMFF033G21- TTGTAGGGCTAATTATCAACTAGTC
____________________________________________________________
consensus AACTTTTTTTTTTTTCAACCACAATAAGCCATACATTGTAGGGCTAATTATCAACTAGTC
. : . : . : . : . : . :
JMFN029F15- TCCCACATCAAATCAAATTCACAAAGATTTATAAATGCCGATACAGCCAAACACATTGGA
JMFN028L18+ TCCCACATCAAATCAAATTCACAAAGATTTATAAATGCCGATACAGCCAAACACATTGGA
JMFN039G10+ TCCCACATCAAATCAAATTCACAAAGATTTATAAATGCCGATACAGCCAAACACATTGGA
JMFN035B11- TCCCACATCAAATCAAATTCACAAAGATTTATAAATGCCGATACAGCCAAACACATTGGA
JMFN011G09+ TCCCACATCAAATCAAATTCACAAAGATTTATAAATGCCGATACAGCCAAACACATTGGA
JMFN020I17- TCCCACATCAAATCAAATTCACAAAGATTTATAAATGCCGATACAGCCAAACACATTGGA
rJMFF046D03- TCCCACATCAAATCAAATTCACAAAGATTTATNNATGCCGATACAGCCAAACACATTGGA
JMFN029B23- TCCCACATCAAATCAAATTCACAAAGATTTATAAATGCCGATACAGCCAAACACATTGGA
JMFF046D03+ TCCCACATCAAATCAAATTCACAAAGATTTATAAATGCCGATACAGCCAAACACATTGGA
JMFF033G21+ TCCCACATCAAATCAAATTCACAAAGATTTATAAATGCCGATACAGCCAAACACATTGGA
JMFN034L13+ TCCCACATCAAATCAAATTCACAAAGATTTATAAATGCCGATACAGCCAAACACATTGGA
rJMFF033G21- TCCCACATCAAATCAAATTCACAAAGATTTATAAATGCCGATACAGCCAAACACATTGGA
____________________________________________________________
consensus TCCCACATCAAATCAAATTCACAAAGATTTATAAATGCCGATACAGCCAAACACATTGGA
. : . : . : . : . : . :
JMFN029F15- AACTAACAAAAACTAATAACAGAGCAATAGAATGATAGATATCAAAAGTAGAATAGTATG
JMFN028L18+ AACTAACAAAAACTAATAACAGAGCAATAGAATGATAGATATCAAAAGTAGAATAGTATG
JMFN039G10+ AACTAACAAAAACTAATAACAGAGCAATAGAATGATAGATATCAAAAGTAGAATAGTATG
JMFN035B11- AACTAACAAAAACTAATAACAGAGCAATAGAATGATAGATATCAAAAGTAGAATAGTATG
JMFN011G09+ AACTAACAAAAACTAATAACAGAGCAATAGAATGATAGATATCAAAAGTAGAATAGTATG
JMFN020I17- AACTAACAAAAACTAATAACAGAGCAATAGAATGATAGATATCAAAAGTAGAATAGTATG
rJMFF046D03- AACTAACAAAAACTAATAACAGAGCAATAGAATGATAGATATCAAAAGTAGAATAGTATG
JMFN029B23- AACTAACAAAAACTAATAACAGAGCAATAGAATGATAGATATCAAAAGTAGAATAGTATG
JMFF046D03+ AACTAACAAAAACTAATAACAGAGCAATAGAATGATAGATATCAAAAGTAGAATAGTATG
JMFF033G21+ AACTAACAAAAACTAATAACAGAGCAATAGAATGATAGATATCAAAAGTAGAATAGTATG
JMFN034L13+ AACTAACAAAAACTAATAACAGAGCAATAGAATGATAGATATCAAAAGTAGAATAGTATG
JMFS094D04+ AACAGAGCAATAGAATGATAGATATCAAAAGTAGAATAGTATG
rJMFF033G21- AACTAACAAAAACTAATAACAGAGCAATAGAATGATAGATATCAAAAGTAGAATAGTATG
____________________________________________________________
consensus AACTAACAAAAACTAATAACAGAGCAATAGAATGATAGATATCAAAAGTAGAATAGTATG
. : . : . : . : . : . :
JMFN029F15- GCAGTCTATGACCAAATGCAGTTGTGGTGAACACCAAAGCATAAAGCTTATTTCATGTAA
JMFN028L18+ GCAGTCTATGACCAAATGCAGTTGTGGTGAACACCAAAGCATAGAGCTTATTTCATGTAA
JMFN039G10+ GCAGTCTATGACCAAATGCAGTTATGGTGAACACCAAAGCATAGAGCTTATTTCATGTAA
JMFN035B11- GCAGTCTATGACCAAATGCAGTTGTGGTGAACACCAAAGCATAGAGCTTATTTCATGTAA
JMFN011G09+ GCAGTCTATGACCAAATGCAGTTGTGGTGAACACCAAAGCATAGAGCTTATTTCATGTAA
JMFN020I17- GCAGTCTATGACCAAATGCAGTTGTGGTGAACACCAAAGCATAGAGCTTATTTCATGTAA
rJMFF046D03- GCAGTCTATGACCAAATGCAGTTGTGGTGAACACCAAAGCATAGAGCTTATTTCATGTAA
JMFN029B23- GCAGTCTATGACCAAATGCAGTTGTGGTGAACACCAAAGCATAGAGCTTATTTCATGTAA
JMFF046D03+ GCAGTCTATGACCAAATGCAGTTGTGGTGAACACCAAAGCATAGAGCTTATTTCATGTAA
JMFF033G21+ GCAGTCTATGACCAAATGCAGTTGTGGTGAACACCAAAGCATAGAGCTTATTTCATGTAA
JMFN034L13+ GCAGTCTATGACCAAATGCAGTTGTGGTGAACACCAAAGCATAGAGCTTATTTCATGTAA
JMFS094D04+ GCAGTCTATGACCAAATGCAGTTGTGGTGAACACCAAAGCATAGAGCTTATTTCATGTAA
rJMFF033G21- GCAGTCTATGACCAAATGCAGTTGTGGTGAACACCAAAGCATAGAGCTTATTTCATGTAA
____________________________________________________________
consensus GCAGTCTATGACCAAATGCAGTTGTGGTGAACACCAAAGCATAGAGCTTATTTCATGTAA
. : . : . : . : . : . :
JMFN029F15- GAGTTTGCAAGGAAATTGCACATAATTCAGTATCTGGGTTCTAGCTTCTCCTTTTCCTGG
JMFN028L18+ GAGTTTGCAAGGAAATTGCACATAATTCAGTATCTGTGTTCTAGCTTCTCCTTTTCCTGG
JMFN039G10+ GAGTTTGCAAGGAAATTGCACATAATTCAGTATCTGTGTTCTAGCTTCTCCTTTTCCTGG
JMFN035B11- GAGTTTGCAAGGAAATTGCACATAATTCAGTATCTGGGTTCTAGCTTCTCCTTTTCCTGG
JMFN011G09+ GAGTTTGCAAGGAAATTGCACATAATTCAGTATCTGTGTTCTAGCTTCTCCTTTTCCTGG
JMFN020I17- GAGTTTGCAAGGAAATTGCACATAATTCAGTATCTGTGTTCTAGCTTCTCCTTTTCCTGG
rJMFF046D03- GAGTTTGCAAGGAAATTGCACATAATTCAGTATCTGTGTTCTAGCTTCTCCTTTTCCTGG
JMFN029B23- GAGTTTGCAAGGAAATTGCACATAATTCAGTATCTGTGTTCTAGCTTCTCCTTTTCCTGG
JMFF046D03+ GAGTTTGCAAGGAAATTGCACATAATTCAGTATCTGTGTTCTAGCTTCTCCTTTTCCTGG
JMFF033G21+ GAGTTTGCAAGGAAATTGCACATAATTCAGTATCTGTGTTCTAGCTTCTCCTTTTCCTGG
JMFN034L13+ GAGTTTGCAAGGAAATTGCACATAATTCAGTATCTGTGTTCTAGCTTCTCCTTTTCCTGG
JMFS094D04+ GAGTTTGCAAGGAAATTGCACATAATTCAGTATCTGTGTTCTAGCTTCTCCTTTTCCTGG
rJMFF033G21- GAGTTTGCAAGGAAATTGCACATAATTCAGTATCTGTGTTCTAGCTTCTCCTTTTCCTGG
____________________________________________________________
consensus GAGTTTGCAAGGAAATTGCACATAATTCAGTATCTGTGTTCTAGCTTCTCCTTTTCCTGG
. : . : . : . : . : . :
JMFN029F15- GATTGCTGCACATACGTGTAGGTTCCGATGAGTGGACCGAGAAGGAGGGTGGCGCTGATC
JMFN028L18+ TATTGCTGCACATACGTGTAGGTTCCGATGAGTGGACCGAGAAGGAGGGTGGCGCTGATC
JMFN039G10+ TATTGCTGCACATACGTGTAGGTTCCGATGAGTGGACCGAGAAGGAGGGTGGCGCTGATC
JMFN035B11- TATTGCTGCACATACGTGTAGGTTCCGATGAGTGGACCGAGAAGGAGGGTGGCGCTGATC
JMFN011G09+ TATTGCTGCACATACGTGTAGGTTCCGATGAGTGGACCGAGAAGGAGGGTGGCGCTGATC
JMFN020I17- AATTGCTGCACATACGTGTAGGTTCCGATGAGTGGACCGAAAAGGAGGGTGGCGCTGATC
rJMFF046D03- TATTGCTGCACATACGTGTAGGTTCCGATGAGTGGACCGAGAAGGAGGGTGGCGCTGATC
JMFN029B23- TATTGCTGCACATACGTGTAGGTTCCGATGAGTGGACCGAGAAGGAGGGTGGCGCTGATC
JMFF046D03+ TATTGCTGCACATACGTGTAGGTTCCGATGAGTGGACCGAGAAGGAGGGTGGCGCTGATC
JMFF033G21+ TATTGCTGCACATACGTGTAGGTTCCGATGAGTGGACCGAGAAGGAGGGTGGCGCTGATC
JMFN034L13+ TATTGCTGCACATACGTGTAGGTTCCGATGAGTGGACCGAGAAGGAGGGTGGCGCTGATC
JMFS094D04+ TATTGCTGCACATACGTGTAGGTTCCGATGAGTGGACCGAGAAGGAGGGTGGCGCTGATC
rJMFF033G21- TATTGCTGCACATACGTGTAGGTTCCGATGAGTGGACCGAGAAGGAGGGTGGCGCTGATC
____________________________________________________________
consensus TATTGCTGCACATACGTGTAGGTTCCGATGAGTGGACCGAGAAGGAGGGTGGCGCTGATC
. : . : . : . : . : . :
JMFN029F15- CAGTTTTCGG
JMFN028L18+ CAGTTTTCGGAGACCTTGTGGTGGATCTTACCCGTAAGGTCCTTCCAAAGACCAGGCATC
JMFN039G10+ CAGTTTTCGGAGACCTTGTGGTGGATCTTACCCGTAAGGTCCTTCCAAAGACCAGGCATC
JMFN035B11- CAGTTTTCGGA
JMFN011G09+ CAGTTTTCGGAGACCTTGTGGTGGATCTTACCCGTAAGGTCCTTCCAAAGACCAGGCATC
JMFN020I17- CAGTTTTCGGAGACCTTGTGGTGGATCTTACCCGTAAGGTCCTTCCAAAGACCAGGCATC
rJMFF046D03- CAGTTTTCGG
JMFN029B23- CAGTTTTCGGAGACCTTGTGGTGGATCTTACCCGTAAGGTCCTTCCAAAGACCAGGCATC
JMFF046D03+ CAGTTTTCGGAGACCTTGTGGTGGATCTTACCCGTAAGGTCCTTCCAAAGACCAGGCATC
JMFF033G21+ CAGTTTTCGGAGACCTTGTGGTGGATCTTACCCGTAAGGTCCTTCCAAAGACCAGGCATC
JMFN034L13+ CAGTTTTCGGAGACCTTGTGGTGGATCTTACCCGTAAGGTCCTTCCAAAGACCAGGCATC
JMFS094D04+ CAGTTTTCGGAGACCTTGTGGTGGATCTTACCCGTAAGGTCCTTCCAAAGACCAGGCATC
rJMFF033G21- CAGTTTTCGGAGACCTTGTGGTGGATCTTACCCGTAAGGTCCTTCCAAAGACCAGGCATC
____________________________________________________________
consensus CAGTTTTCGGAGACCTTGTGGTGGATCTTACCCGTAAGGTCCTTCCAAAGACCAGGCATC
. : . : . : . : . : . :
JMFN028L18+ ACCTTCTGCTGGAACGGCGATAGCGCGTACACCACTGCCTTCAACCTCACCGGCTGCTTC
JMFN039G10+ ACCTTCTGCTGGAACGGCGATAGCGCGTACACCACTGCCTTCAACCTCACCGGCTGCTTC
JMFN011G09+ ACCTTCTGCTGGAACGGCGATAGCGCGTACACCACTGCCTTCAACCTCACCGGCTGCTTC
JMFN020I17- ACCTTCTGCTGGAACGGCGATAGCGCGTACACCACTGCCTTCAACCTCACCGGCTGTCTT
JMFN029B23- ACCTTCTGCTGGAACGGCGATAGCGCGTACACCACTGCCTTCAACCTCACCGGCTGCTTC
JMFF046D03+ ACCTTCTGCTGGAACGGCGATAGCGCGTACACCACTGCCTTCAACCTCACCGGCTGCTTC
JMFF033G21+ ACCTTCTGCTGGAACGGCGATAGCGCGTACACCACTGCCTTCAACCTCACCGGCTGCTTC
JMFN034L13+ ACCTTCTGCTGGAACGGCGATAGCGCGTACACCACTGCCTTCAACCTCACCGGCTGCTTC
JMFS094D04+ ACCTTCTGCTGGAACGGCGATAGCGCGTACACCACTGCCTTCAACCTCACCGGCTGCTTC
rJMFF033G21- ACCTTCTGCTGGAACGGCGATAGCGCGTACACCACTGCCTTCAACCTCACCGGCTGCTTC
____________________________________________________________
consensus ACCTTCTGCTGGAACGGCGATAGCGCGTACACCACTGCCTTCAACCTCACCGGCTGCTTC
. : . : . : . : . : . :
JMFN028L18+ CCCATCGTCTTCTTCTC
JMFN039G10+ CCCATCGTCTTCTTCTCTCGGCTGATGAACGGTCTTCTAGGGCTT
JMFN011G09+ CCCATCGTCTTCTTCTCTC
JMFN020I17- CCCATCGTCTTCTTCT
JMFN029B23- CCCATCGTCTTCTTCTCTCGGCTGATGAACGGTCTTCTAGGGCTTTCA
JMFF046D03+ CCCATCGTCTTCTTCTCTCGGCTGATGAACGGTCTTCTAGGGCTTTCAGATCGTTTCGT
JMFF033G21+ CCCATCGTCTTCTTCTCTCGGCTGATGAACGGTCTTCTAGGGCTTTCAGATCGTTTCGT
JMFN034L13+ CCCAT
JMFS094D04+ CCCATCGTCTTCTTCTCTCGGCTGATGAACGGTCTTCTAGGGCTTTC
rJMFF033G21- CCCATCGTCTTCTTCTCTCGGCTGATGAACGGTCTTCTAGGGCTTTCAGATCGTTTCGTT
____________________________________________________________
consensus CCCATCGTCTTCTTCTCTCGGCTGATGAACGGTCTTCTAGGGCTTTCAGATCGTTTCGTT