clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF020H14 | Sequence | 453 | 002624 (5) | ref|XP_011076201.1| | 2e-25 | PREDICTED: heat stress transcription factor B-2a-like [Sesamum indicum] ref|XP_ | 727 | 008286 (5) | ref|XP_009603015.1| | 6e-45 | PREDICTED: heat stress transcription factor B-2b [Nicotiana tomentosiformis] ref |
JMFF022I10 | Sequence | 498 | 002624 (5) | ref|XP_009603015.1| | 5e-46 | PREDICTED: heat stress transcription factor B-2b [Nicotiana tomentosiformis] ref | 728 | 008286 (5) | ref|XP_009603015.1| | 9e-44 | PREDICTED: heat stress transcription factor B-2b [Nicotiana tomentosiformis] ref |
JMFF033A24 | Sequence | 527 | 008286 (5) | ref|XP_009603015.1| | 3e-41 | PREDICTED: heat stress transcription factor B-2b [Nicotiana tomentosiformis] ref | 749 | 002624 (5) | ref|XP_009603015.1| | 2e-41 | PREDICTED: heat stress transcription factor B-2b [Nicotiana tomentosiformis] ref |
JMFF037O01 | Sequence | 122 | 002624 (5) | emb|CDP21507.1| | 2e-19 | unnamed protein product [Coffea canephora] | 686 | 008286 (5) | ref|XP_009603015.1| | 4e-39 | PREDICTED: heat stress transcription factor B-2b [Nicotiana tomentosiformis] ref |
JMSF011F18 | Sequence | 459 | 002624 (5) | ref|XP_009603015.1| | 2e-45 | PREDICTED: heat stress transcription factor B-2b [Nicotiana tomentosiformis] ref | 777 | 008286 (5) | emb|CDP21507.1| | 4e-47 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMFF033A24+ AAAATCGCGATTGATTCATAAACTAAGCA
____________________________________________________________
consensus AAAATCGCGATTGATTCATAAACTAAGCA
. : . : . : . : . : . :
JMSF011F18+ CGTATGTGTTGAGT
JMFF022I10+ CGTATGTGTTGAGT
rJMFF033A24+ TCAAATCAAAAGAGTTTCCCGTACAAATTTGGTGATATAGAACTCACGTATGTGTTGAGT
____________________________________________________________
consensus TCAAATCAAAAGAGTTTCCCGTACAAATTTGGTGATATAGAACTCACGTATGTGTTGAGT
. : . : . : . : . : . :
JMSF011F18+ TGACGAACGAAGCTGGAGAAATTGTTGTGTTTGAAATATTTAGGAAGCAAATCCCTAGCG
JMFF037O01+ TGAAATATTTAGGAAGCAAATCCCTAGCG
JMFF022I10+ TGACGAACGAAGCTGGAGAAATTGTTGTGTTTGAAATATTTAGGAAGCAAATCCCTAGCG
JMFF020H14+ TGAAATATTTAGGAAGCAAATCCCTAGCG
rJMFF033A24+ TGACGAACGAAGCTGGAGAAATTGTTGTGTTTGAAATATTTAGGAAGCAAATCCCTAGCG
____________________________________________________________
consensus TGACGAACGAAGCTGGAGAAATTGTTGTGTTTGAAATATTTAGGAAGCAAATCCCTAGCG
. : . : . : . : . : . :
JMSF011F18+ AACTCAGTCGGATTCCACACGATGAAGCTAGATCCGTCTTCGTTCCAGGAGATCACATCG
JMFF037O01+ AACTCAGTCGGATTCCACACGATGAAGCTAGATCCGTCTTCGTTCCAGGAGATCACATCG
JMFF022I10+ AACTCAGTCGGATTCCACACGATGAAGCTAGATCCGTCTTCGTTCCAGGAGATCACATCG
JMFF020H14+ AACTCAGTCGGATTCCACACGATGAAGCTAGATCCGTCTTCGTTCCAGGAGATCACATCG
rJMFF033A24+ AACTCAGTCGGATTCCACACGATGAAGCTAGATCCGTCTTCGTTCCAGGAGATCACATCG
____________________________________________________________
consensus AACTCAGTCGGATTCCACACGATGAAGCTAGATCCGTCTTCGTTCCAGGAGATCACATCG
. : . : . : . : . : . :
JMSF011F18+ TCGATGGAGCGGTCGTCCACAAGCTGGAACGTTTTCGTCAGAAACGGCGTCGGAACACTC
JMFF037O01+ TCGATGGAGCGGTCGTCCACAAGCTGGAACGTT
JMFF022I10+ TCGATGGAGCGGTCGTCCACAAGCTGGAACGTTTTCGTCAGAAACGGCGTCGGAACACTC
JMFF020H14+ TCGATGGAGCGGTCGTCCACAAGCTGGAACGTTTTCGTCAGAAACGGCGTCGGAACACTC
rJMFF033A24+ TCGATGGAGCGGTCGTCCACAAGCTGGAACGTTTTCGTCAGAAACGGCGTCGGAACACTC
____________________________________________________________
consensus TCGATGGAGCGGTCGTCCACAAGCTGGAACGTTTTCGTCAGAAACGGCGTCGGAACACTC
. : . : . : . : . : . :
JMSF011F18+ CTCTGCGCCTCTCCACCAGCCGTTGTTTCTCCTCCGTTACGCTCCACCGGCGGCACCGGA
JMFF022I10+ CTCTGCGCCTCTCCACCAGCCGTTGTTTCTCCTCCGTTACGCTCCACCGGCGGCACCGGA
JMFF020H14+ CTNTGCGCCTCTCCACCAGCCGTTGTTTCTCCTCCGTTACGCTCCACCGGCGGCACCGGA
rJMFF033A24+ CTCTGCGCCTCTCCACCAGCCGTTGTTTCTCCTCCGTTACGCTCCACCGGCGGCACCGGA
____________________________________________________________
consensus CTCTGCGCCTCTCCACCAGCCGTTGTTTCTCCTCCGTTACGCTCCACCGGCGGCACCGGA
. : . : . : . : . : . :
JMSF011F18+ GGACCCATAAATTCCAAAATCAACCT
JMFF022I10+ GGACCCATAAATTCCAAAATCAACCT
JMFF020H14+ GGACCCATAAATTCCAAAATCAACCT
rJMFF033A24+ GGACCCATAAATTCCAAAATCAACCTGAATCACAACCCAAAACCATTCACAAACAACGCA
____________________________________________________________
consensus GGACCCATAAATTCCAAAATCAACCTGAATCACAACCCAAAACCATTCACAAACAACGCA
. : . : . : . : . : . :
rJMFF033A24+ AACGCCAAAACGATTCTTCTAAAACTTCAGAAACAAAAACTTAAACACAGAAACCTTTGA
____________________________________________________________
consensus AACGCCAAAACGATTCTTCTAAAACTTCAGAAACAAAAACTTAAACACAGAAACCTTTGA
. : . : . : . : . : . :
rJMFF033A24+ GCTGGAAAACAGACAGGGATATTCACTTTAACGAAGCTACTGATGCAGATCTGGTGTGCA
____________________________________________________________
consensus GCTGGAAAACAGACAGGGATATTCACTTTAACGAAGCTACTGATGCAGATCTGGTGTGCA
. : . : . : . : . : . :
rJMFF033A24+ GATGCACGGCGGCGAAGAAGGAGACGTCTGCAGCGGTGGGTGTGGAGGAGGAGGAGAAAG
____________________________________________________________
consensus GATGCACGGCGGCGAAGAAGGAGACGTCTGCAGCGGTGGGTGTGGAGGAGGAGGAGAAAG
. : . : . : . : . : . :
rJMFF033A24+ AGAAGGAGAAGGAGGAGAGATGGGTAGGAATAAATGGTAATTCTAGAAGGTTCCTATGGT
____________________________________________________________
consensus AGAAGGAGAAGGAGGAGAGATGGGTAGGAATAAATGGTAATTCTAGAAGGTTCCTATGGT
. : . : . : . : . : . :
rJMFF033A24+ GTATGTTACTTATTTCAGTGGGGGGTGGGAACCTAAAAGTACAGATAAGATAGGAAATTT
____________________________________________________________
consensus GTATGTTACTTATTTCAGTGGGGGGTGGGAACCTAAAAGTACAGATAAGATAGGAAATTT
. : . : . : . : . : . :
rJMFF033A24+ CGAGATATCGGAGAAAATGAGAAAAAAGAAATGAAAAGTGGAATAATAAAAGTGAAACAG
____________________________________________________________
consensus CGAGATATCGGAGAAAATGAGAAAAAAGAAATGAAAAGTGGAATAATAAAAGTGAAACAG