Contig 002608:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029I06Sequence301002608 (4)710002608 (4)ref|XP_011078169.1|143PREDICTED: uncharacterized protein LOC105161979 [Sesamum indicum]
JMFF029I17Sequence425002608 (4)704002608 (4)ref|XP_011078169.1|143PREDICTED: uncharacterized protein LOC105161979 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF029I06- CCCGTGGGTATTCCCCGCACCCGCAAAATCCCCACGGGGGCAGGT
JMFF029I17- CCCGTGGGTATTCCCCGCACCCGCAAAATCCCCACGGGGGCAGGT
                      ____________________________________________________________
consensus CCCGTGGGTATTCCCCGCACCCGCAAAATCCCCACGGGGGCAGGT
 
. : . : . : . : . : . :
JMFF029I06- ATGGGAAGGAATTTCATTACCCGCGCAGGTGCGGGTGCGGGTATGGGGAGTGGTGTGGGT
JMFF029I17- ATGGGAAGGAATTTCATTACCCGCGCAGGTGCGGGTGCGGGTATGGGGAGTGGTGTGGGT
                      ____________________________________________________________
consensus ATGGGAAGGAATTTCATTACCCGCGCAGGTGCGGGTGCGGGTATGGGGAGTGGTGTGGGT
 
. : . : . : . : . : . :
JMFF029I06- TGCGTTGTGGTTGCTGAGGGGGGTGTGGATGTGGCTCCTCCTGGCGATGTGGATGTGGCT
JMFF029I17- TGCGTTGTGGTTGCTGAGGGGGGTGTGGATGTGGCTCCTCCTGGCGATGTGGATGTGGCT
rJMFF029I17+ TTGCTGAGGGGGGTGTGGATGTGGCTCCTCCTGGCGATGTGGATGTGGCT
rJMFF029I06+ TTGCTGAGGGGGGTGTGGATGTGGCTCCTCCTGGCGATGTGGATGTGGCT
                      ____________________________________________________________
consensus TGCGTTGTGGTTGCTGAGGGGGGTGTGGATGTGGCTCCTCCTGGCGATGTGGATGTGGCT
 
. : . : . : . : . : . :
JMFF029I06- CTTCCTGGCGATGTCGTCGTGGCTCCTCCTGGCGATGTCGTCGTTGACTATTTTTTGGAA
JMFF029I17- CTTCCTGGCGATGTCGTCGTGGCTCCTCCTGGCGATGTCGTCGTTGACTATTTTTTGGAA
rJMFF029I17+ CTTCCTGGCGATGTCGTCGTGGCTCCTCCTGGCGATGTCGTCGTTGACTATTTTTTGGAA
rJMFF029I06+ CTTCCTGGCGATGTCGTCGTGGCTCCTCCTGGCGATGTCGTCGTTGACTATTTTTTGGAA
                      ____________________________________________________________
consensus CTTCCTGGCGATGTCGTCGTGGCTCCTCCTGGCGATGTCGTCGTTGACTATTTTTTGGAA
 
. : . : . : . : . : . :
JMFF029I06- GGACTACCCATAAAAACAGTCAGGTGTTCCCAATGTCCTANGGATCGAGCTTGCTACTTT
JMFF029I17- GGACTACCCATAAAAACAGTCAGGNGTTCCCAATGTCCTAGGGATCGAGCTTGCTACTTT
rJMFF029I17+ GGACTACCCATAAAAACAGTCAGGTGTTCCCAATGTCCTAGGGATCGAGCTTGCTACTTT
rJMFF029I06+ GGACTACCCATAAAAACAGTCAGGTGTTCCCAATGTCCTAGGGATCGAGCTTGCTACTTT
                      ____________________________________________________________
consensus GGACTACCCATAAAAACAGTCAGGTGTTCCCAATGTCCTAGGGATCGAGCTTGCTACTTT
 
. : . : . : . : . : . :
JMFF029I06- ACNACCCCATGCGAGA
JMFF029I17- ACGACCCCATGCGAGATGGANAGTTCAGGATTACCTTCATTTGCTGCGGCTGTGACCACA
rJMFF029I17+ ACGACCCCATGCGAGATGGAGAGTTCAGGATTACCTTCATTTGCTGCGGCTGTGACCACA
rJMFF029I06+ ACGACCCCATGCGAGATGGAGAGTTCAGGATTACCTTCATTTGCTGCGGCTGTGACCACA
                      ____________________________________________________________
consensus ACGACCCCATGCGAGATGGAGAGTTCAGGATTACCTTCATTTGCTGCGGCTGTGACCACA
 
. : . : . : . : . : . :
JMFF029I17- GATGGATAGATGGAGAGGAGTATTTGATACACAGTATGGATCTCTCTCTCTTGCTCATGG
rJMFF029I17+ GATGGATAGATGGAGAGGAGTATTTGATACACAGTATGGATCTCTCTCTCTTGCTCATGG
rJMFF029I06+ GATGGATAGATGGAGAGGAGTATTTGATACACAGTATGGATCTCTCTCTCTTGCTCATGG
                      ____________________________________________________________
consensus GATGGATAGATGGAGAGGAGTATTTGATACACAGTATGGATCTCTCTCTCTTGCTCATGG
 
. : . : . : . : . : . :
JMFF029I17- TTATACTCATGATTTGAGTC
rJMFF029I17+ TTATACTCATGATTTGAGTCTCTTTTCAGATTTCAAGTGTTTCAGGGGAACTTCGATATA
rJMFF029I06+ TTATACTCATGATTTGAGTCTCTTTTCAGATTTCAAGTGTTTCAGGGGAACTTCGATATA
                      ____________________________________________________________
consensus TTATACTCATGATTTGAGTCTCTTTTCAGATTTCAAGTGTTTCAGGGGAACTTCGATATA
 
. : . : . : . : . : . :
rJMFF029I17+ CAGATGCATTGGCACTTGTGCACACCCTAGAGGATGCATCAAAAGGGTTTGCTGAATATG
rJMFF029I06+ CAGATGCATTGGCACTTGTGCACACCCTAGAGGATGCATCAAAAGGGTTTGCTGAATATG
                      ____________________________________________________________
consensus CAGATGCATTGGCACTTGTGCACACCCTAGAGGATGCATCAAAAGGGTTTGCTGAATATG
 
. : . : . : . : . : . :
rJMFF029I17+ TAAATGCCACTCTTGCCCGTCTCCATCCAATTCATTGCACAAGGAACCGGAAAGTTGATG
rJMFF029I06+ TAAATGCCACTCTTGCCCGTCTCCATCCAATTCATTGCACAAGGAACCGGAAAGTTGATG
                      ____________________________________________________________
consensus TAAATGCCACTCTTGCCCGTCTCCATCCAATTCATTGCACAAGGAACCGGAAAGTTGATG
 
. : . : . : . : . : . :
rJMFF029I17+ TTGAGTTTGACATGACAACCATACCTGCCTTTCTGGTCGTTGTCTCCATTCTGTGGTTTG
rJMFF029I06+ TTGAGTTTGACATGACAACCATACCTGCCTTTCTGGTCGTTGTCTCCATTCTGTGGTTTG
                      ____________________________________________________________
consensus TTGAGTTTGACATGACAACCATACCTGCCTTTCTGGTCGTTGTCTCCATTCTGTGGTTTG
 
. : . : . : . : . : . :
rJMFF029I17+ TTTTGAGGCCAAGAAGACAAAAGCCTAAGATCAACTGAAGTTTTTCTTCCTATGCTGAGA
rJMFF029I06+ TTTTGAGGCCAAGAAGACAAAAGCCTAAGATCAACTGAAGTTTTTCTTCCTATGCTGAGA
                      ____________________________________________________________
consensus TTTTGAGGCCAAGAAGACAAAAGCCTAAGATCAACTGAAGTTTTTCTTCCTATGCTGAGA
 
. : . : . : . : . : . :
rJMFF029I17+ ATTAGTTAGTTATCATAAATGGCTTACTGGCAACTTGTGACAAAGCCCACTCTGACTGCA
rJMFF029I06+ ATTAGTTAGTTATCATAAATGGCTTACTGGCAACTTGTGACAAAGCCCACTCTGACTGCA
                      ____________________________________________________________
consensus ATTAGTTAGTTATCATAAATGGCTTACTGGCAACTTGTGACAAAGCCCACTCTGACTGCA
 
. : . : . : . : . : . :
rJMFF029I17+ GGAAAAATTTTGATTCCAAAACAGTGATCTTTTTTCTAGTGCCCTCTATTTATT
rJMFF029I06+ GGAAAAATTTTGATTCCAAAACAGTGATCTTTTTTCTAGTGCCCTCTATTTATTTGATCA
                      ____________________________________________________________
consensus GGAAAAATTTTGATTCCAAAACAGTGATCTTTTTTCTAGTGCCCTCTATTTATTTGATCA