Contig 002606:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001K23Sequence485006683 (9)ref|XP_009606105.1|8e-67PREDICTED: serine/threonine-protein kinase At5g01020 isoform X1 [Nicotiana tome752002606 (9)ref|XP_004249015.1|2e-105PREDICTED: serine/threonine-protein kinase At5g01020 [Solanum lycopersicum]
JMFF012B11Sequence516006683 (9)ref|XP_009606105.1|2e-61PREDICTED: serine/threonine-protein kinase At5g01020 isoform X1 [Nicotiana tome775002606 (9)ref|XP_004249015.1|3e-105PREDICTED: serine/threonine-protein kinase At5g01020 [Solanum lycopersicum]
JMFF020L05Sequence521006683 (9)ref|XP_009606105.1|1e-66PREDICTED: serine/threonine-protein kinase At5g01020 isoform X1 [Nicotiana tome737002606 (9)ref|XP_004249015.1|3e-94PREDICTED: serine/threonine-protein kinase At5g01020 [Solanum lycopersicum]
JMFF022O11Sequence476006683 (9)ref|XP_009606105.1|6e-56PREDICTED: serine/threonine-protein kinase At5g01020 isoform X1 [Nicotiana tome739002606 (9)ref|XP_004249015.1|4e-86PREDICTED: serine/threonine-protein kinase At5g01020 [Solanum lycopersicum]
JMFF029A02Sequence529006683 (9)ref|XP_009606105.1|2e-67PREDICTED: serine/threonine-protein kinase At5g01020 isoform X1 [Nicotiana tome829002606 (9)ref|XP_004249015.1|6e-77PREDICTED: serine/threonine-protein kinase At5g01020 [Solanum lycopersicum]
JMFN014H09Sequence614002606 (9)ref|XP_004249015.1|1e-55PREDICTED: serine/threonine-protein kinase At5g01020 [Solanum lycopersicum]
JMSF025I06Sequence673006683 (9)ref|XP_009606105.1|7e-104PREDICTED: serine/threonine-protein kinase At5g01020 isoform X1 [Nicotiana tome737002606 (9)ref|XP_004249015.1|1e-102PREDICTED: serine/threonine-protein kinase At5g01020 [Solanum lycopersicum]
JMSF026L03Sequence678006683 (9)ref|XP_009606105.1|1e-106PREDICTED: serine/threonine-protein kinase At5g01020 isoform X1 [Nicotiana tome809002606 (9)ref|XP_004249015.1|8e-138PREDICTED: serine/threonine-protein kinase At5g01020 [Solanum lycopersicum]
JMSF043O10Sequence726006683 (9)ref|XP_009606105.1|8e-118PREDICTED: serine/threonine-protein kinase At5g01020 isoform X1 [Nicotiana tome572002606 (9)ref|XP_004249015.1|3e-55PREDICTED: serine/threonine-protein kinase At5g01020 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF026L03+ GGTCAACAA
                      ____________________________________________________________
consensus GGTCAACAA
 
. : . : . : . : . : . :
rJMSF026L03+ GAATGATGATTGCTCTGGAGCAGCGAAAGGGCTAGCTTTCCTTCATAATGCAGAAAGGCC
                      ____________________________________________________________
consensus GAATGATGATTGCTCTGGAGCAGCGAAAGGGCTAGCTTTCCTTCATAATGCAGAAAGGCC
 
. : . : . : . : . : . :
rJMSF026L03+ TGTAATTTATCGTGATTTCAAGACATCAAATATTTTATTGGATTCTGATTACACTGCAAA
                      ____________________________________________________________
consensus TGTAATTTATCGTGATTTCAAGACATCAAATATTTTATTGGATTCTGATTACACTGCAAA
 
. : . : . : . : . : . :
rJMSF026L03+ ACTTTCTGATTTTGGTCTTGCAAAAGCTGGGCCACAAGGTGATGAGACTCATGTATCGAC
rJMSF025I06+ GGCCACAAGGTGATGAGACTCATGTATCGAC
rJMFF001K23+ TGCAAAAGCTGGGCCACAAGGTGATGAGACTCATGTATCGAC
rJMFF012B11+ TGCAAAAGCTGGGCCACAAGGTGATGAGACTCATGTATCGAC
rJMFF020L05+ C
rJMFF022O11+ AC
                      ____________________________________________________________
consensus ACTTTCTGATTTTGGTCTTGCAAAAGCTGGGCCACAAGGTGATGAGACTCATGTATCGAC
 
. : . : . : . : . : . :
rJMSF026L03+ ACGAGTGATGGGTACATATGGATATGCAGCT-CCTGAATATGTGATGACGGGACACCTTA
rJMSF025I06+ ACGAGTGATGGGTACATATGGATATGCAGCT-CCTGAATATGTGATGACGGGACACCTTA
rJMFF001K23+ ACGAGTGATGGGTACATATGGATATGCAGCT-CCTGAATATGTGATGACGGGACACCTTA
rJMFF012B11+ ACGAGTGATGGGTACATATGGATATGCAGCT-CCTGAATATGTGATGACGGGACACCTTA
rJMFF020L05+ ACGAGTGATGGGTACATATGGATATGCAGCT-CCTGAATATGTGATGACGGGACACCTTA
rJMFF022O11+ ACGAGTGATGGGTACATATGGATATGCAGCTCCCTGAATATGTGATGACGGGACACCTTA
rJMFF029A02+ GGTACATATGGATATGCAGCT-CCTGAATATGTGATGACGGGACNCCTTA
                      ____________________________________________________________
consensus ACGAGTGATGGGTACATATGGATATGCAGCT-CCTGAATATGTGATGACGGGACACCTTA
 
. : . : . : . : . : . :
rJMSF026L03+ CTG-CAAGGAGTGATGTGTACAGTTTTGGAGTGGTTCTCCTGGAGTTATTGACGGGAAGA
rJMSF025I06+ CTG-CAAGGAGTGATGTGTACAGTTTTGGAGTGGTTCTCCTGGAGTTATTGACGGGAAGG
rJMFF001K23+ CTG-CAAGGAGTGATGTGTACAGTTTTGGAGTGGTTCTCCTGGAGTTATTGACGGGAAGA
rJMFF012B11+ CTG-CAAGGAGTGATGTGTACAGTTTTGGAGTGGTTCTCCTGGAGTTATTGACGGGAAGA
rJMFF020L05+ CTG-CAAGGAGTGATGTGTACAGTTTTGGAGTGGTTCTCCTGGAGTTATTGACGGGAAGA
rJMFF022O11+ CTG-CAAGGAGTGATGTGTACAGTTTTGGAGTGGTTCTCCTGGAGTTATTGACGGGAAGA
rJMFF029A02+ CTGCCAAGGAGTGATGTGTACAGTTTTGGAGTGGTTCTCCTGGAGTTATTGACGGGAAGA
                      ____________________________________________________________
consensus CTG-CAAGGAGTGATGTGTACAGTTTTGGAGTGGTTCTCCTGGAGTTATTGACGGGAAGA
 
. : . : . : . : . : . :
rJMSF026L03+ AAGTCTGTTGATAAGACGAGACCAAGCAAGGAGCAAAACCTGGTAGATTGGGCACGACCA
rJMSF025I06+ AAGTCTGTTGATAAGACGAGACCAAGCAAGGAGCAAAACCTGGTAGATTGGGCACGACCA
rJMFF001K23+ AAGTCTGTTGATAAGACGAGACCAAGCAAGGAGCAAAACCTGGTAGATTGGGCACGACCA
rJMFF012B11+ AAGTCTGTTGATAAGACGAGACCAAGCAAGGAGCAAAACCTGGTAGATTGGGCACGACCA
rJMFF020L05+ AAGTCTGTTGATAAGACGAGACCAAGCAAGGAGCAAAACCTGGTAGATTGGGCACGACCA
rJMSF043O10+ AAAACCTGGTAGATTGGGCACGACCA
rJMFF022O11+ AAGTCTGTTGATAAGACGAGACCAAGCAAGGAGCAAAACCTGGTAGATTGGGCACGACCA
JMFN014H09- CAAAACCTGGTAGATTGGGCACGACCA
rJMFF029A02+ AAGTCTGTTGATAAGACGAGACCAAGCAAGGAGCAAAACCTGGTAGATTGGGCACGACCA
                      ____________________________________________________________
consensus AAGTCTGTTGATAAGACGAGACCAAGCAAGGAGCAAAACCTGGTAGATTGGGCACGACCA
 
. : . : . : . : . : . :
rJMSF026L03+ AAGCTTAATGACAAGAGAAAAATGCTTCAAATAATAGATCCTAGATTAGAGAACCAATAC
rJMSF025I06+ AAGCTTAATGACAAGAGAAAAATGCTTCAAATAATAGATCCTAGATTAGAGAACCAATAC
rJMFF001K23+ AAGCTTAATGACAAGAGAAAAATGCTTCAAATAATAGATCCTAGATTAGAGAACCAATAC
rJMFF012B11+ AAGCTTAATGACAAGAGAAAAATGCTTCAAATAATAGATCCTAGATTAGAGAACCAATAC
rJMFF020L05+ AAGCTTAATGACAAGAGAAAAATGCTTCAAATAATAGATCCTAGATTAGAGAACCAATAC
rJMSF043O10+ AAGCTTAATGACAAGAGAAAAATGCTTCAAATAATAGATCCTAGATTAGAGAACCAATAC
rJMFF022O11+ AAGCTTAATGACAAGAGAAAAATGCTTCAAATAATAGATCCTAGATTAGAGAACCAATAC
JMFN014H09- AAGCTTAATGACAAGAGAAAAATGCTTCAAATAATAGATCCTAGATTAGAGAACCAATAC
rJMFF029A02+ AAGCTTAATGACAAGAGAAAAATGCTTCAAATAATAGATCCTAGATTAGAGAACCAATAC
                      ____________________________________________________________
consensus AAGCTTAATGACAAGAGAAAAATGCTTCAAATAATAGATCCTAGATTAGAGAACCAATAC
 
. : . : . : . : . : . :
rJMSF026L03+ TCTGTGAGGGCAGCACAGAAAGCCTGTAGTCTGGCTTACTACTGCTTGAGCCAAAATCCT
rJMSF025I06+ TCTGTGAGGGCAGCACAGAAAGCCTGTAGTCTGGCTTACTACTGCTTGAGCCAAAATCCT
rJMFF001K23+ TCTGTGAGGGCAGCACAGAAAGCCTGTAGTCTGGCTTACTACTGCTTGAGCCAAAATCCT
rJMFF012B11+ TCTGTGAGGGCAGCACAGAAAGCCTGTAGTCTGGCTTACTACTGCTTAAGCCAAAATCCT
rJMFF020L05+ TCTGTGAGGGCAGCACAGAAAGCCTGTAGTCTGGCTTACTACTGCTTGAGCCAAAATCCT
rJMSF043O10+ TCTGTGAGGGCAGCACAGAAAGCCTGTAGTCTGGCTTACTACTGCTTGAGCCAAAATCCT
rJMFF022O11+ TCTGTGAGGGCAGCACAGAAAGCCTGTAGTCTGGCTTACTACTGCTTGAGCCAAAATCCT
JMFN014H09- TCTGTGAGGGCAGCACAGAAAGCCTGTAGTCTGGCTTACTACTGCTTGAGCCAAAATCCT
rJMFF029A02+ TCTGTGAGGGCAGCACAGAAAGCCTGTAGTCTGGCTTACTACTGCTTGAGCCAAAATCCT
                      ____________________________________________________________
consensus TCTGTGAGGGCAGCACAGAAAGCCTGTAGTCTGGCTTACTACTGCTTGAGCCAAAATCCT
 
. : . : . : . : . : . :
rJMSF026L03+ AAAGCAAGACCCTTAATGAGTGATGTGGTTGAAACTCTGGAGCCCTTGCAATCCAGTGGA
rJMSF025I06+ AAAGCAAGACCCTTAATGAGTGATGTGGTTGAAACTCTGGAGCCCTTGCAATCCAGTGGA
rJMFF001K23+ AAAGCAAGACCCTTAATGAGTGATGTGGTTGAAACTCTGGAGCCCTTGCAATCCAGTGGA
rJMFF012B11+ AAAGCAAGACCCTTAATGAGTGATGTGGTTGAAACTCTGGAGCCCTTGCAATCCAGTGGA
rJMFF020L05+ AAAGCAAGACCCTTAATGAGTGATGTGGTTGAAACTCTGGAGCCCTTGCAATCCAGTGGA
rJMSF043O10+ AAAGCAAGACCCTTAATGAGTGATGTGGTTGAAACTCTGGAGCCCTTGCAATCCAGTGGA
rJMFF022O11+ AAAGCAAGACCCTTAATGAGTGATGTGGTTGAAACTCTGGAGCCCTTGCAATCCAGTGGA
JMFN014H09- AAAGCAAGACCCTTAATGAGTGATGTGGTTGAAACTCTGGAGCCCTTGCAATCCAGTGGA
rJMFF029A02+ AAAGCAAGACCCTTAATGAGTGATGTGGTTGAAACTCTGGAGCCCTTGCAATCCAGTGGA
                      ____________________________________________________________
consensus AAAGCAAGACCCTTAATGAGTGATGTGGTTGAAACTCTGGAGCCCTTGCAATCCAGTGGA
 
. : . : . : . : . : . :
rJMSF026L03+ ATTGCAAATGAAGCCTCATCGTCGTCGTTATCTGGTGTTGGTGTTCCTTTTGGTGTGGGG
rJMSF025I06+ ATTGCAAATGAAGCCTCATCGTCGTCGTTATCTGGTGTTGGTGTTCCTTTTGGTGTGGGG
rJMFF001K23+ ATTGCAAATGAAGCCTCATCGTCGTCGTTATCTGGTGTTGGTGTTCCTTTTGGTGTGGGG
rJMFF012B11+ ATTGCAAATGAAGCCTCATCGTCGTCGTTATCTGGTGTTGGTGTTCCTTTTGGTGTGGGG
rJMFF020L05+ ATTGCAAATGAAGCCTCATCGTCGTCGTTATCTGGTGTTGGTGTTCCTTTTGGTGTGGGG
rJMSF043O10+ ATTGCAAATGAAGCCTCATCGTCGTCGTTATCTGGTGTTGGTGTTCCTTTTGGTGTGGGG
rJMFF022O11+ ATTGCAAATGAAGCCTCATCGTCGTCGTTATCTGGTGTTGGTGTTCCTTTTGGTGTGGGG
JMFN014H09- ATTGCAAATGAAGCCTCATCGTCGTCGTTATCTGGTGTTGGTGTTCCTTTTGGTGTGGGG
rJMFF029A02+ ATTGCAAATGAAGCCTCATCGTCGTCGTTATCTGGTGTTGGTGTTCCTTTTGGTGTGGGG
                      ____________________________________________________________
consensus ATTGCAAATGAAGCCTCATCGTCGTCGTTATCTGGTGTTGGTGTTCCTTTTGGTGTGGGG
 
. : . : . : . : . : . :
rJMSF026L03+ AGGGTCCCCGAGTTTCAGTTGCATCACAGGTTTGCCAGCAATCTTGGGACTGCTGCTGGC
rJMSF025I06+ AGGGTCCCCGAGTTTCAGTTGCATCACAGGTTTGCCAGCAATCTTGGGACTGCTGCTGGC
rJMFF001K23+ AGGGTCCCCGAGTTTCAGTTGCATCACAGGTTTGCCAGCAATCTTGGGACTGCTGCTGGC
rJMFF012B11+ AGGGTCCCCGAGTTTCAGTTGCATCACAGGTTTGCCAGCAATCTTGGGACTGCTGCTGGC
rJMFF020L05+ AGGGTCCCCGAGTTTCAGTTGCATCACAGGTTTGCCAGCAATCTTGGGACTGCTGCTGGC
rJMSF043O10+ AGGGTCCCCGAGTTTCAGTTGCATCACAGGTTTGCCAGCAATCTTGGGACTGCTGCTGGC
rJMFF022O11+ AGGGTCCCCGAGTTTCAGTTGCATCACAGGTTTGCCAGCAATCTTGGGACTGCTGCTGGC
JMFN014H09- AGGGTCCCCGAGTTTCAGTTGCATCACAGGTTTGCCAGCAATCTTGGGACTGCTGCTGGC
rJMFF029A02+ AGGGTCCCCGAGTTTCAGTTGCATCACAGGTTTGCCAGCAATCTTGGGACTGCTGCTGGC
                      ____________________________________________________________
consensus AGGGTCCCCGAGTTTCAGTTGCATCACAGGTTTGCCAGCAATCTTGGGACTGCTGCTGGC
 
. : . : . : . : . : . :
rJMSF026L03+ TGCCGGTCTCCCAACCCAAATTGTTCCCCGGGTGGCCCTGCACCATGTAGGGTAAGATGA
rJMSF025I06+ TGCCGGTCTCCCAACCCAAATTGTTCCCCGGGTGGCCCTGCACCATGTAGGGTAAGATGA
rJMFF001K23+ TGCCGGTCTCCCAACCCAAATTGTTCCCCGGGTGGCCCTGCACCATGTAGGGTAAGATGA
rJMFF012B11+ TGCCGGTCTCCCAACCCAAATTGTTCCCCGGGTGGCCCTGCACCATGTAGGGTAAGATGA
rJMFF020L05+ TGCCGGTCTCCCAACCCAAATTGTTCCCCGGGTGGCCCTGCACCATGTAGGGTAAGATGA
rJMSF043O10+ TGCCGGTCTCCCAACCCAAATTGTTCCCCGGGTGGCCCTGCACCATGTAGGGTAAGATGA
rJMFF022O11+ TGCCGGTCTCCCAACCCAAATTGTTCCCCGGGTGGCCCTGCACCATGTAGGGTAAGATGA
JMFN014H09- TGCCGGTCTCCCAACCCAAATTGTTCCCCGGGTGGCCCTGCACCATGTAGGGTAAGATGA
rJMFF029A02+ TGCCGGTCTCCCAACCCAAATTGTTCCCCGGGTGGCCCTGCACCATGTAGGGTAAGATGA
                      ____________________________________________________________
consensus TGCCGGTCTCCCAACCCAAATTGTTCCCCGGGTGGCCCTGCACCATGTAGGGTAAGATGA
 
. : . : . : . : . : . :
rJMSF026L03+ GGATTCTGACATGTATTTTGGTGTTTCATTGTGCACTCATCCTTTAACTCGTGAGTTGGG
rJMSF025I06+ GGATTCTGACATGTATTTTGGTGTTTCATTGTGCACTCATCCTTTAACTCGTGAGTTGGG
rJMFF001K23+ GGATTCTGACATGTATTTTGGTGTTTCATTGTGCACTCATCCTTTAACTCGTGAGTTGGG
rJMFF012B11+ GGATTCTGACATGTATTTTGGTGTTTCATTGTGCACTCATCCTTTAACTCGTGAGTTGGG
rJMFF020L05+ GGATTCTGACATGTATTTTGGTGTTTCATTGTGCACTCATCCTTTAACTCGTGAGTTGGG
rJMSF043O10+ GGATTCTGACATGTATTTTGGTGTTTCATTGTGCACTCATCCTTTAACTCGTGAGTTGGG
rJMFF022O11+ GGATTCTGACATGTATTTTGGTGTTTCATTGTGCACTCATCCTTTAACTCGTGAGTTGGG
JMFN014H09- GGATTCTGACATGTATTTTGGTGTTTCATTGTGCACTCATCCTTTAACTCGTGAGTTGGG
rJMFF029A02+ GGATTCTGACATGTATTTTGGTGTTTCATTGTGCACTCATCCTTTAACTCGTGAGTTGGG
                      ____________________________________________________________
consensus GGATTCTGACATGTATTTTGGTGTTTCATTGTGCACTCATCCTTTAACTCGTGAGTTGGG
 
. : . : . : . : . : . :
rJMSF026L03+ TGCATTGGTGTTGCTGTGCTAG
rJMSF025I06+ TGCATTGGTGTTGCTGTGCTAGGTGTAAATTGTGCTGGTAATGTAAGCCTTTCAGCGTCT
rJMFF001K23+ TGCATTGGTGTTGCTGTGCTAGGTGTAAATTGTGCTGGTAATGTAAGCCTTTCAGCGTCT
rJMFF012B11+ TGCATTGGTGTTGCTGTGCTAGGTGTAAATTGTGCTGGTAATGTAAGCCTTTCAGCGTCT
rJMFF020L05+ TGCATTGGTGTTGCTGTGCTAGGTGTAAATTGTGCTGGTAATGTAAGCCTTTCAGCGTCT
rJMSF043O10+ TGCATTGGTGTTGCTGTGCTAGGTGTAAATTGTGCTGGTAATGTAAGCCTTTCAGCGTCT
rJMFF022O11+ TGCATTGGTGTTGCTGTGCTAGGTGTAAATTGTGCTGGTAATGTAAGCCTTTCAGCGTCT
JMFN014H09- TGCATTGGTGTTGCTGTGCTAGGTGTAAATTGTGCTGGTAATGTAAGCCTTTCAGCGTCT
rJMFF029A02+ TGCATTGGTGTTGCTGTGCTAGGTGTAAATTGTGCTGGTAATGTAAGCCTTTCAGCGTCT
                      ____________________________________________________________
consensus TGCATTGGTGTTGCTGTGCTAGGTGTAAATTGTGCTGGTAATGTAAGCCTTTCAGCGTCT
 
. : . : . : . : . : . :
rJMSF025I06+ TTGGTTGTGTTTGTTTAACAACTTC
rJMFF001K23+ TTGGTTGTGTTTGTTTAACAACTTCAAGCTGTACTATG
rJMFF012B11+ TTGGTTGTGTTTGTTTAACAACTTCAAGCTGTACTATGTGAAAAAAAAGGTATGGTCAGT
rJMFF020L05+ TTGGTTGTGTTTGTTTAACAACTTCAAGCTGTACTATGTGAAAAAAAAGGTATGGTCAGT
rJMSF043O10+ TTGGTTGTGTTTGTTTAACAACTTCAAGCTGTA
rJMFF022O11+ TTGGTTGTGTTTGTTTAACAACTTCAAGCTGTACTATGTGAAAAAAAAGGTATGGTCAGT
JMFN014H09- TTGGTTGTGTTTGTTTAACAACTTCAAGCTGTACTATGTGAAAAAAAAGGTATGGTCAGT
rJMFF029A02+ TTGGTTGTGTTTGTTTAACAACTTCAAGCTGTACTATGTGAAAAAAAAGGTATGGTCAGT
                      ____________________________________________________________
consensus TTGGTTGTGTTTGTTTAACAACTTCAAGCTGTACTATGTGAAAAAAAAGGTATGGTCAGT
 
. : . : . : . : . : . :
rJMFF012B11+ TTATGGCTGGATGCT
rJMFF020L05+ TTATGGCTGGATGCTGAT
rJMFF022O11+ TTATGGCTGGATGCTGAT
JMFN014H09- TTATGGCTGGATGCTGATATGGTTGGTTTCTTCTCTCTTTCCCATTT
rJMFF029A02+ TTATGGCTGGATGCTGATATGGTTGGTTTCTTCTCTCTTTCCCATTTATATTTGCAAATT
                      ____________________________________________________________
consensus TTATGGCTGGATGCTGATATGGTTGGTTTCTTCTCTCTTTCCCATTTATATTTGCAAATT
 
. : . : . : . : . : . :
rJMFF029A02+ CTACCATGTGTTTTTTAATGGTATGTTTATTCAAATTCAATGTGGTAATGTAGCACAAGA
                      ____________________________________________________________
consensus CTACCATGTGTTTTTTAATGGTATGTTTATTCAAATTCAATGTGGTAATGTAGCACAAGA