| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF027M22 | Sequence | 525 | 006690 (7) | ref|XP_006351510.1| | 201 | PREDICTED: uncharacterized protein LOC102597647 [Solanum tuberosum] | 578 | 002603 (7) | ref|XP_002511170.1| | 7e-15 | conserved hypothetical protein [Ricinus communis] gb|EEF51772.1| conserved hypot |
| JMFF031C23 | Sequence | 591 | 006690 (7) | ref|XP_006351510.1| | 246 | PREDICTED: uncharacterized protein LOC102597647 [Solanum tuberosum] | 573 | 002603 (7) | ref|XP_010086962.1| | 4e-12 | hypothetical protein L484_010108 [Morus notabilis] gb|EXB25241.1| hypothetical p |
| JMSF012E19 | Sequence | 234 | 006690 (7) | 756 | 002603 (7) | ref|XP_006351510.1| | 218 | PREDICTED: uncharacterized protein LOC102597647 [Solanum tuberosum] | |||
| JMSF025A11 | Sequence | 650 | 006690 (7) | ref|XP_006351510.1| | 265 | PREDICTED: uncharacterized protein LOC102597647 [Solanum tuberosum] | 758 | 002603 (7) | ref|XP_006351510.1| | 219 | PREDICTED: uncharacterized protein LOC102597647 [Solanum tuberosum] |
| JMSF039I04 | Sequence | 727 | 006690 (7) | ref|XP_006351510.1| | 320 | PREDICTED: uncharacterized protein LOC102597647 [Solanum tuberosum] | 871 | 002603 (7) | ref|XP_006351510.1| | 288 | PREDICTED: uncharacterized protein LOC102597647 [Solanum tuberosum] |
| JMSF040D14 | Sequence | 671 | 006690 (7) | ref|XP_006351510.1| | 352 | PREDICTED: uncharacterized protein LOC102597647 [Solanum tuberosum] | 867 | 002603 (7) | ref|XP_006351510.1| | 261 | PREDICTED: uncharacterized protein LOC102597647 [Solanum tuberosum] |
| JMSF044G11 | Sequence | 811 | 006690 (7) | ref|XP_006351510.1| | 340 | PREDICTED: uncharacterized protein LOC102597647 [Solanum tuberosum] | 843 | 002603 (7) | ref|XP_009623438.1| | 2e-81 | PREDICTED: probable transporter mch1 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF044G11+ AAATTATGCAT
rJMSF040D14+ TTTTCTGAAAATATTGTAAGAAAATTATGCAT
rJMSF039I04+ TTGGCCGTGTTGCAGGTGGATACTTTTCTGAAAATATTGTAAG-AAATTATGCAT
____________________________________________________________
consensus TTGGCCGTGTTGCAGGTGGATACTTTTCTGAAAATATTGTAAGAAAATTATGCAT
. : . : . : . : . : . :
rJMSF044G11+ ACCCAAGGCCAGTGGCAATGGCTGCTGTTCAAATTGTTATGGCATTTGTGCTTTTCTTTT
rJMSF040D14+ ACCCAAGGCCAGTGGCAATGGCTGCTGTTCAAATTGTTATGGCATTTGTGCTTTTCTTTT
rJMSF039I04+ ACCCAAGGCCAGTGGCAATGGCTGCTGTTCAAATTGTTATGGCATTTGTGCTTTTCTTTT
____________________________________________________________
consensus ACCCAAGGCCAGTGGCAATGGCTGCTGTTCAAATTGTTATGGCATTTGTGCTTTTCTTTT
. : . : . : . : . : . :
rJMSF044G11+ ATTCCATGGGCTGGCCGGGCGCAATTTATGTACTCTCTGTCATGGTAGGCCTTTGTTATG
rJMSF040D14+ ATTCCATGGGCTGGCCGGGCGCAATTTATGTACTCTCTGTCATGGTAGGCCTTTGTTATG
rJMSF039I04+ ATTCCATGGGCTGGCCGGGCGCAATTTATGTACTCTCTGTCATGGTAGGCCTTTGTTATG
rJMSF012E19+ CCATGGGCTGGCCGGGCGCAATTTATGTACTCTCTGTCATGGTAGGCCTTTGTTATG
rJMSF025A11+ TTCCATGGGCTGGCCGGGCGCAATTTATGTACTCTCTGTCATGGTAGGCCTTTGTTATG
____________________________________________________________
consensus ATTCCATGGGCTGGCCGGGCGCAATTTATGTACTCTCTGTCATGGTAGGCCTTTGTTATG
. : . : . : . : . : . :
rJMSF044G11+ GAGCCCACTGGGCAATCGTCCCAGCTGCGATTTCTGAACTTTTCGGATTGAAAAGCTTCG
rJMSF040D14+ GAGCCCACTGGGCAATCGTCCCAGCTGCGATTTCTGAACTTTTCGGATTGAAAAGCTTCG
rJMSF039I04+ GAGCCCACTGGGCAATCGTCCCAGCTGCGATTTCTGAACTTTTCGGATTGAAAAGCTTCG
rJMSF012E19+ GAGCCCACTGGGCAATCGTCCCAGCTGCGATTTCTGAACTTTTCGGATTGAAAAGCTTCG
rJMSF025A11+ GAGCCCACTGGGCAATCGTCCCAGCTGCGATTTCTGAACTTTTCGGATTGAAAAGCTTCG
____________________________________________________________
consensus GAGCCCACTGGGCAATCGTCCCAGCTGCGATTTCTGAACTTTTCGGATTGAAAAGCTTCG
. : . : . : . : . : . :
rJMSF044G11+ GAGCATTATATAATTTCCTTACATTGGCAAGTCCAGCTGGTTCCTTGGTCTTCTCTGGAG
rJMSF040D14+ GAGCATTATATAATTTCCTTACATTGGCAAGTCCAGCTGGTTCCTTGGTCTTCTCTGGAG
rJMSF039I04+ GAGCATTATATAATTTCCTTACATTGGCAAGTCCAGCTGGTTCCTTGGTCTTCTCTGGAG
rJMSF012E19+ GAGCATTATATAATTTCCTTACATTGGCAAGTCCAGCTGGTTCCTTGGTCTTCTCTGGAG
rJMSF025A11+ GAGCATTATATAATTTCCTTACATTGGCAAGTCCAGCTGGTTCCTTGGTCTTCTCTGGAG
____________________________________________________________
consensus GAGCATTATATAATTTCCTTACATTGGCAAGTCCAGCTGGTTCCTTGGTCTTCTCTGGAG
. : . : . : . : . : . :
rJMSF044G11+ TAATAGCCAGTGGCATCTACGACTACCAAGCAAAGCAGCAACAACAACTTACCCGAGCAT
rJMSF040D14+ TAATAGCCAGTGGCATCTACGACTACCAAGCAAAGCAGCAACAACAACTTACCCGAGCAT
rJMSF039I04+ TAATAGCCAGTGGCATCTACGACTACCAAGCAAAGCAGCAACAACAACTTACCCGAGCAT
rJMSF012E19+ TAATAGCCAGTGGCATCTACGACTACCAAGCAAAGCAGCAACAACAACTTACCCGAGCAT
rJMSF025A11+ TAATAGCCAGTGGCATCTACGACTACCAAGCAAAGCAGCAACAACAACTTACCCGAGCAT
rJMFF031C23+ CAAGCAAAGCAGCANCANCANCTTACCCGAGCAT
rJMFF027M22+ CTACCAAGCAAAGCAGCANCANCAACTTACCCGAGCAT
____________________________________________________________
consensus TAATAGCCAGTGGCATCTACGACTACCAAGCAAAGCAGCAACAACAACTTACCCGAGCAT
. : . : . : . : . : . :
rJMSF044G11+ CAAATTTACTTGCTGATGATGAAGTCCTTACGTGCACTGGTACCATATGTTACTCTCTCA
rJMSF040D14+ CAAATTTACTTGCTGATGATGAAGTCCTTACGTGCACTGGTACCATATGTTACTCTCTCA
rJMSF039I04+ CAAATTTACTTGCTGATGATGAAGTCCTTACGTGCACTGGTACCATATGTTACTCTCTCA
rJMSF012E19+ CAAATTTACTTGCTGATGATGAAGTCCTTACGTGCACTGGTACCATATGTTACTCTCTCA
rJMSF025A11+ CAAATTTACTTGCTGATGATGAAGTCCTTACGTGCACTGGTACCATATGTTACTCTCTCA
rJMFF031C23+ CAAATTTACTTGCTGATGANGAAGTCCTTACGTGCACTGGTACCATATGTTACTCTCTCA
rJMFF027M22+ CAAATTTACTTGCTGATGANGAAGTCCTTACGTGCACTGGTACCATATGTTACTCTCTCA
____________________________________________________________
consensus CAAATTTACTTGCTGATGATGAAGTCCTTACGTGCACTGGTACCATATGTTACTCTCTCA
. : . : . : . : . : . :
rJMSF044G11+ CTTGTGGTATAATGTCTGCTCTCTGCATTATCGCGTTTGTGTTGAGTTTGATCTTTGTGC
rJMSF040D14+ CTTGTGGTATAATGTCTGCTCTCTGCATTATCGCGTTTGTGTTGAGTTTGATCGTTGTGC
rJMSF039I04+ CTTGTGGTATAATGTCTGCTCTCTGCATTATCGCGTTTGTGTTGAGTTTGATCGTTGTGC
rJMSF012E19+ CTTGTGGTATAATGTCTGCTCTCTGCATTATCGCGTTTGTGTTGAGTTTGATCGTTGTGC
rJMSF025A11+ CTTGTGGTATAATGTCTGCTCTCTGCATTATCGCGTTTGTGTTGAGTTTGATCGTTGTGC
rJMFF031C23+ NTTGTGGTATAATGTNNGCTCTNTGCATTATNGCGTTNGTGTTGAGTTNGATCGTTGTGC
rJMFF027M22+ CTTGTGGTATAATGTNTGCTCTNTGCATTATCGCGTTNGTGTTGAGTTTGATCGTTGTGC
____________________________________________________________
consensus CTTGTGGTATAATGTCTGCTCTCTGCATTATCGCGTTTGTGTTGAGTTTGATCGTTGTGC
. : . : . : . : . : . :
rJMSF044G11+ ATCGTACTAAGAGGGTTTACGCCCAACTCTATAACAAGGCGGGTAATTGAGCCTAAAAAT
rJMSF040D14+ ATCGTACTAAGAGGGTTTACGCCCAACTCTATAACAAGGCGGGTAATTGAGCCTAAAAAT
rJMSF039I04+ ATCGTACTAAGAGGGTTTACGCCCAACTCTATAACAAGGCGGGTAATTGAGCCTAAAAAT
rJMSF012E19+ ATCGTACTAAGAGGGTTTACGCCCAACTCTATAACAAGGCGGGTAATTGAGCCTAAAAAT
rJMSF025A11+ ATCGTACTAAGAGGGTTTACGCCCAACTCTATAACAAGGCGGGTAATTGAGCCTAAAAAT
rJMFF031C23+ ATCGTANTAAGAGGGTTTACGCCCAACTCTATAACAAGGCGGGTAATTGAGCCTAAAAAT
rJMFF027M22+ ATCGTANTAAGAGGGTTTACGCCCAACTCTATAACAAGGCGGGTAATTGAGCCTAAAAAT
____________________________________________________________
consensus ATCGTACTAAGAGGGTTTACGCCCAACTCTATAACAAGGCGGGTAATTGAGCCTAAAAAT
. : . : . : . : . : . :
rJMSF044G11+ GGGTATGCTATGATCTCTCTGCAAGCTTGGGTTTTTTAAATATCCAGTTTTGCTTGCTGG
rJMSF040D14+ GGGTATGCTATGATCTCTCTGCAAGCTTGGGTTTTTTAAATATCCAGTTTTGCTTGCTGG
rJMSF039I04+ GGGTATGCTATGATCTCTCTGCAAGCTTGGGTTTTTTAAATATCCAGTTTTGCTTGCTGG
rJMSF012E19+ GGGTATGCTATGATCTCTCTGCAAGCTTGGGTTTTTTAAATATCCAGTTTTGCTTGCTGG
rJMSF025A11+ GGGTATGCTATGATCTCTCTGCAAGCTTGGGTTTTTTAAATATCCAGTTTTGCTTGCTGG
rJMFF031C23+ GGGTATGNTATGATCTCTNTGCAAGCNTGGGTTTTTTAAATATCCAGTTNNGCTTGNTGG
rJMFF027M22+ GGGTATGCTATGATCTCTNTGCAAGCTTGGGTTTTTTAAATATCCAGTTNNGCTTGCTGG
____________________________________________________________
consensus GGGTATGCTATGATCTCTCTGCAAGCTTGGGTTTTTTAAATATCCAGTTTTGCTTGCTGG
. : . : . : . : . : . :
rJMSF044G11+ ATCATTCCATACATTATCAGAAGAACGAGAGGAAGCACACAAAACGTACGACTACTTCCA
rJMSF040D14+ ATCATTCCATACATTATCAGAAGAACGAGAGGAAGCACACAAAACGTACGACTACTTCCA
rJMSF039I04+ ATCATTCCATACATTATCAGAAGAACGAGAGGAAGCACACAAAACGTACGACTACTTCCA
rJMSF012E19+ ATCATTCCATACATTATCAGAAGAACGAGAGGAAGCACACAAAACGTACGACTACTTCCA
rJMSF025A11+ ATCATTCCATACATTATCAGAAGAACGAGAGGAAGCACACAAAACGTACGACTACTTCCA
rJMFF031C23+ ATCATTCCATACATTATCAGAAGANCGAGAGGAAGCACACAAAACGTACGANTACTTCCA
rJMFF027M22+ ATCATTCCATACATTATCAGAAGAACGAGAGGAAGCACACAAAACGTACGANTACTTCCA
____________________________________________________________
consensus ATCATTCCATACATTATCAGAAGAACGAGAGGAAGCACACAAAACGTACGACTACTTCCA
. : . : . : . : . : . :
rJMSF044G11+ CATGTTCCCGGAGACTGAAGCCAGCCCGCATCAGATCTCATTTATTCGTAAGCTGCTGTA
rJMSF040D14+ CATGTTCCCGGAGACTGAAGCCAGCCCGCATCAGATCTCATTTATTCGTAAGCTGCTGTA
rJMSF039I04+ CATGTTCCCGGAGACTGAAGCCAGCCCGCATCAGATCTCATTTATTCGTAAGCTGCTGTA
rJMSF012E19+ CATGTTCCCGGAGACTGAAGCCAGCCCGCATCAGATCTCATTTATTCGTAAGCTGCTGTA
rJMSF025A11+ CATGTTCCCGGAGACTGAAGCCAGCCCGCATCAGATCTCATTTATTCGTAAGCTGCTGTA
rJMFF031C23+ CATGTTCCCGGAGANNGAAGCCAGCCCGCATCAGATCTCATTTATTCGTAAGCTGNTGTA
rJMFF027M22+ CATGTTCCCGGAGACTGAAGCCAGCCCGCATCAGATCTCATTTATTCGTAAGCTGCTGTA
____________________________________________________________
consensus CATGTTCCCGGAGACTGAAGCCAGCCCGCATCAGATCTCATTTATTCGTAAGCTGCTGTA
. : . : . : . : . : . :
rJMSF044G11+ ATTTGTTTTGTAGGAACTGCTTATTGTATTCAAATGTTCTTTGGCCTTTTAAATTTTGCA
rJMSF040D14+ ATTTGTTTTGTAGGAACTGCTTATTGTATTCAAATGTTCTTTGGCCTTTTAAATTTTGCA
rJMSF039I04+ ATTTGTTTTGTAGGAACTGCTTATTGTATTCAAATGTTCTTTGGCCTTTTAAATTTTGCA
rJMSF012E19+ ATTTGTTTTGTAGGAACTGCTTATTGTATTCAAATGTTCTTTGGCCTTTTAAATTTTGCA
rJMSF025A11+ ATTTGTTTTGTAGGAACTGCTTATTGTATTCAAATGTTCTTTGGCCTTTTAAATTTTGCA
rJMFF031C23+ ATTTGTTTTGTAGGAANTGCTTATTGTATTCAAATGTTCTTTGGCCTNTNAAATTTTGCA
rJMFF027M22+ ATTTGTTTTGTAGGAACTGCTTATTGTATTCAAATGTTCTTTGGCCTTTNAAATTTTGCA
____________________________________________________________
consensus ATTTGTTTTGTAGGAACTGCTTATTGTATTCAAATGTTCTTTGGCCTTTTAAATTTTGCA
. : . : . : . : . : . :
rJMSF044G11+ TCAAGGCCCATTCAAGATGTGGGAAAAGTTGATCATTTGCTTGGACTGTAAGTGTTGTGA
rJMSF040D14+ TCAAGGCCCATTCAAGATGTGGGAAAAGTTGATCATTTGCTTGGACTGTAAGTGTTGTGA
rJMSF039I04+ TCAAGGCCCATTCAAGATGTGGGAAAAGTTGATCATTTGCTTGGACTGTAAGTGTTGTGA
rJMSF012E19+ TCAAGGCCCATTCAAGATGTGGGAAAAGTTGATCATTTGCTTGGACTGTAAGTGTTGTGA
rJMSF025A11+ TCAAGGCCCATTCAAGATGTGGGAAAAGTTGATCATTTGCTTGGACTGTAAGTGTTGTGA
rJMFF031C23+ TCAAGGCCCATTCNAGANGTGGGAAAAGTTGATCATTTNCTTGGACTGTAAGTGTNGTGA
rJMFF027M22+ TCAAGGCCCATTCNAGATGTGGGAAAAGTTGATCATTTNCTTGGACTGTAAGTGTNGTGA
____________________________________________________________
consensus TCAAGGCCCATTCAAGATGTGGGAAAAGTTGATCATTTGCTTGGACTGTAAGTGTTGTGA
. : . : . : . : . : . :
rJMSF044G11+ ATGGGAGGAGTGATGGATATTGTACTGTGAACCATAT
rJMSF040D14+ ATGGGAGGAGTGATGGATATTGTA
rJMSF039I04+ ATGGGAGGAGTGATGGATATTGTACTGTGAACCATAT
rJMSF012E19+ ATGGGAGGAGTGATGGATATTGTACTGTGAACCATAT
rJMSF025A11+ ATGGGAGGAGTGATGGATATTGTACTGTGAACCATAT
rJMFF031C23+ ATGGNAGGAGTGANGGATATTGTACTGTGAACCATANCTAAGTCTTTACTAAGGAAAAG
rJMFF027M22+ ATGGGAGGAGTGATGGATATTGTACTGTGAACCATANCTAAGTCTTTANTAAGGAAAAGT
____________________________________________________________
consensus ATGGGAGGAGTGATGGATATTGTACTGTGAACCATATCTAAGTCTTTACTAAGGAAAAGT