| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010P05 | Sequence | 555 | 000998 (8) | 705 | 002579 (7) | ref|XP_009598097.1| | 6e-12 | PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Nicotiana tomentosiform | |||
| JMFF012B22 | Sequence | 631 | 002579 (7) | ref|XP_009598097.1| | 6e-12 | PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Nicotiana tomentosiform | |||||
| JMFF015P02 | Sequence | 590 | 000998 (8) | 758 | 002579 (7) | ref|XP_009588928.1| | 5e-17 | PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Nicotiana tomentosiform | |||
| JMFF017I02 | Sequence | 554 | 000998 (8) | 641 | 002579 (7) | ref|XP_009598097.1| | 6e-12 | PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Nicotiana tomentosiform | |||
| JMFF021F10 | Sequence | 551 | 000998 (8) | 634 | 002579 (7) | ref|XP_009598097.1| | 7e-12 | PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Nicotiana tomentosiform | |||
| JMFF021N10 | Sequence | 460 | 000998 (8) | 349 | 002579 (7) | ref|XP_009588928.1| | 1e-08 | PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Nicotiana tomentosiform | |||
| JMSF050G04 | Sequence | 631 | 000998 (8) | 729 | 002579 (7) | ref|XP_009588928.1| | 2e-28 | PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Nicotiana tomentosiform | |||
This contig is upended
. : . : . : . : . : . :
rJMSF050G04+ AGACCAAGCAGCTGGAGAGAGA-TTACGGCGTC
rJMFF015P02+ GGTGGAAGACCAAGCAGCTGGAGAGAGATTTACGGCGTC
____________________________________________________________
consensus GGTGGAAGACCAAGCAGCTGGAGAGAGATTTACGGCGTC
. : . : . : . : . : . :
rJMSF050G04+ CTGAAAGCCAACTATGATTCCC-TCAAACGCAGCTATGAAACTCTCCAACATGACAACCA
rJMFF015P02+ CTGAAAGCCAACTATGATTCCCNTCAAACGCAGCTATGAAACTCTCCAACATGACAACCA
rJMFF010P05+ CCA
____________________________________________________________
consensus CTGAAAGCCAACTATGATTCCCNTCAAACGCAGCTATGAAACTCTCCAACATGACAACCA
. : . : . : . : . : . :
rJMSF050G04+ AGATCTCCTCGAACAGATTCGGGAGCTGAAAGGGAAGATGAATGGCGAGGACGACGGAGA
rJMFF015P02+ AGATCTCCTCGAACAGATTCGGGAGCTGAAAGGGAAGATGAATGGCGAGGACGACGGAGA
rJMFF017I02+ CGGAGA
rJMFF010P05+ AGATNTCCTNGANCAGATTNGGGAGNTGAAAGGGAAGANGAATGGNGAGGNCGNCGGAGA
____________________________________________________________
consensus AGATCTCCTCGAACAGATTCGGGAGCTGAAAGGGAAGATGAATGGCGAGGACGACGGAGA
. : . : . : . : . : . :
rJMSF050G04+ GAGAAAAGTGACGGTGACGGTGAAGGAAGAGGCGGTGGAATCCTTTAGCGGCGGCGGCGA
rJMFF015P02+ GAGAAAAGTGACGGTGACGGTGAAGGAAGAGGCGGTGGAATCCTTTAGCGGCGGCGGCGA
rJMFF017I02+ GAGAAAAGTGNCGGTGACGGTGAAAGAAGAGGCGGTGGAATCCTTTAGCGGCGGCGGCGA
rJMFF010P05+ GAGAAAAGTGNCGGTGNCGGTGAAAGAAGAGGCGGTGGAATCCTTTAGCGGCGGCGGCGA
____________________________________________________________
consensus GAGAAAAGTGACGGTGACGGTGAAGGAAGAGGCGGTGGAATCCTTTAGCGGCGGCGGCGA
. : . : . : . : . : . :
rJMSF050G04+ CAAGTCGAAATCGACGGCCGCCGTCTCGCTTGACATTGAAACAGAGCTAAACTTCGGCGA
rJMFF015P02+ CAAGTCGAAATCGACGGCCGCCGTCTCGCTTGACATTGAAACAGAGCTAAACTTCGGCGA
rJMFF017I02+ CAAGTNGAAATNGACGGCCGCCGTCTCGCTTGACATTGAAACAGAGCTAAACTTCGGCGA
rJMFF010P05+ CAAGTNGAAATCGACGGCCGCCGTCTCGCTTGACATTGAAACAGAGCTAAACTTCGGCGA
rJMFF012B22+ GCCGTCTCGCTTGACATTGAAACAGAGNTAAACTTCGGCGA
rJMFF021F10+ CGCTTGACATTGAAACAGAGCTAAACTTCGGCGA
____________________________________________________________
consensus CAAGTCGAAATCGACGGCCGCCGTCTCGCTTGACATTGAAACAGAGCTAAACTTCGGCGA
. : . : . : . : . : . :
rJMSF050G04+ CAACCATTTCCACGGCGGCGGCGGCGGCGGCAACGCCTCGATTTTTGCGGAATTCAAAGA
rJMFF015P02+ CAACCATTTCCACGGCGGCGGCGGCGGCGGCAACGCCTCGATTTTTGCGGAATTCAAAGA
rJMFF017I02+ CAACCATTTCCACGGCGGCGGCGGCGGCGGCAACGCCTCGATTTTTGCGGAATTCAAAGA
rJMFF010P05+ CAACCATTTCCACGGCGGCGGCGGCGGCGGCAACGCCTCGATTTTTGCGGAATTCAAAGA
rJMFF012B22+ CAACCATTTCCACGGCGGCGGCGGCGGCGGCAACGCCTCGATTTTTGCGGAATTCAAAGA
rJMFF021F10+ CAACCATTTCCACGGCGGCGGCGGCGGCGGCAACGCCTCGATTTTTGCGGAATTCAAAGA
____________________________________________________________
consensus CAACCATTTCCACGGCGGCGGCGGCGGCGGCAACGCCTCGATTTTTGCGGAATTCAAAGA
. : . : . : . : . : . :
rJMSF050G04+ CTGGTCATCGGACAGCGACTCCGCCAGCGCCATACTGAACGATGACAACAGCCCCAACGC
rJMFF015P02+ CTGGTCATCGGACAGCGACTCCGCCAGCGCCATACTGAACGATGACAACAGCCCCAACGC
rJMFF017I02+ CTGGTCATCGGACAGCGACTCCGCCAGCGCCATACTGAACGATGACAACAGCCCCAACGC
rJMFF010P05+ CTGGTCATCGGACAGCGACTCCGCCAGCGCCATACTGAACGATGACAACAGCCCCAACGC
rJMFF012B22+ CTGGTCATCGGACAGCGACTCCGCCAGCGCCATACTGAACGATGACAACAGCCCCAACGC
rJMFF021N10+ CCAGCGCCATNCTGANNGANGACAACAGCCCCANCGC
rJMFF021F10+ CTGGTCATCGGACAGCGACTCCGCCAGCGCCATACTGAACGATGACAACAGCCCCAACGC
____________________________________________________________
consensus CTGGTCATCGGACAGCGACTCCGCCAGCGCCATACTGAACGATGACAACAGCCCCAACGC
. : . : . : . : . : . :
rJMSF050G04+ CGCCGCCATGTCTTCGTCGGGGGCGGCGTTCTTGACGGCGTCCGACAACCCCGCTCAATT
rJMFF015P02+ CGCCGCCATGTCTTCGTCGGGGGCGGCGTTCTTGACGGCGTCCGACAACCCCGCTCAATT
rJMFF017I02+ CGCCGCCATGTCTTCGTCGGGGGCGGCGTTCTTGACGGCGTCCGACAACCCCGCTCAATT
rJMFF010P05+ CGCCGCCATGTCTTCGTCGGGGGCGGCGTTCTTGACGGCGTCCGACAACCCCGCTCAATT
rJMFF012B22+ CGCCGCCATGTCTTCGTCGGGGGCGGCGTTCTTGACGGCGTCCGACAACCCCGCTCAATT
rJMFF021N10+ CGCCGCCATGTCTTCGTCGGGGGCGGCGTTCTTGACGGCGTCCGACAACCCCGCTCAATT
rJMFF021F10+ CGCCGCCATGTCTTCGTCGGGGGCGGCGTTCTTGACGGCGTCCGACAACCCCGCTCAATT
____________________________________________________________
consensus CGCCGCCATGTCTTCGTCGGGGGCGGCGTTCTTGACGGCGTCCGACAACCCCGCTCAATT
. : . : . : . : . : . :
rJMSF050G04+ CTCGGAGATCCCGAAAAACATCCTCGGAGATTCCTACGACGACTCCCAGTTCGTGAAAAT
rJMFF015P02+ CTCGGAGATCCCGAAAAACATCCTCGGAGATTCCTACGACGACTCCCAGTTCGTGAAAAT
rJMFF017I02+ CTCGGAGATCCCGAAAAACATCCTCGGAGATTCCTACGACGACTCCCAGTTCGTGAAAAT
rJMFF010P05+ CTCGGAGATCCCGAAAAACATCCTCGGAGATTCCTACGACGACTCCCAGTTCGTGAAAAT
rJMFF012B22+ CTCGGAGATCCCGAAAAACATCCTCGGAGATTCCTACGACGACTCCCAGTTCGTGAAAAT
rJMFF021N10+ CTCGGAGATCCCGAAAAACATCCTCGGAGATTCCTACGACGACTCCCAGTTCGTGAAAAT
rJMFF021F10+ CTCGGAGATCCCGAAAAACATCCTCGGAGATTCCTACGACGACTCCCAGTTCGTGAAAAT
____________________________________________________________
consensus CTCGGAGATCCCGAAAAACATCCTCGGAGATTCCTACGACGACTCCCAGTTCGTGAAAAT
. : . : . : . : . : . :
rJMSF050G04+ TGAGGAGCACAATTTCTTCGCCGCCGGCGAAGAGCCCTGCACCATTCTGCTATCGGAAGA
rJMFF015P02+ TGAGGAGCACAATTTCTTCGCCGCCGGCGAAGAGCCCTGCACCATTCTGCTATCGGAAGA
rJMFF017I02+ TGAGGAGCACAATTTCTTCGCCGCCGGCGAAGAGCCCTGCACCATTCTGCTATCGGAAGA
rJMFF010P05+ TGAGGAGCACAATTTCTTCGCCGCCGGCGAAGAGCCCTGCACCATTCTGCTATCGGAAGA
rJMFF012B22+ TGAGGAGCACAATTTCTTCGCCGCCGGCGAAGAGCCCTGCACCATTCTGCTATCGGAAGA
rJMFF021N10+ TGAGGAGCACAATTTCTTCGCCGCCGGCGAAGAGCCCTGCACCATTNTGCTATCGGAAGA
rJMFF021F10+ TGAGGAGCACAATTTCTTCGCCGCCGGCGAAGAGCCCTGCACCATTCTGCTATCGGAAGA
____________________________________________________________
consensus TGAGGAGCACAATTTCTTCGCCGCCGGCGAAGAGCCCTGCACCATTCTGCTATCGGAAGA
. : . : . : . : . : . :
rJMSF050G04+ ACAGGCTCCAACGTTCCCTTGGTGCTCCCCTGACGATTGGAATTGGGAAGATGAATCCTA
rJMFF015P02+ ACAGGCTCCAACGTTCCCTTGGTGCTCCCCTGACGATTGGAATTGGGAAGATGAATCCTA
rJMFF017I02+ ACAGGCTCCAACGTTCCCTTGGTGCTCCCCTGACGATTGGAATTGGGAAGATGAATCCTA
rJMFF010P05+ ACAGGCTCCAACGTTCCCTTGGTGCTCCCCTGACGATTGGAATTGGGAAGATGAATCCTA
rJMFF012B22+ ACAGGCTCCAACGTTCCCTTGGTGCTCCCCTGACGATTGGAATTGGGAAGATGAATCCTA
rJMFF021N10+ ACAGGCTCCAACGTTCCCTTGGTGCTCCCCTGACGATTGGAATTGGGAAGATGAATCCTA
rJMFF021F10+ ACAGGCTCCAACGTTCCCTTGGTGCTCCCCTGACGATTGGAATTGGGAAGATGAATCCTA
____________________________________________________________
consensus ACAGGCTCCAACGTTCCCTTGGTGCTCCCCTGACGATTGGAATTGGGAAGATGAATCCTA
. : . : . : . : . : . :
rJMSF050G04+ AGATCAAGAGTTCAAATAACTTTCTGGTAAATTTAAAAAATTTCAGAAACATTATTGGAG
rJMFF015P02+ AGATCAAGAATTCAAATAACTTTCTGGTAAATTTAAAAAATTTCAGAAACATTATTGGAG
rJMFF017I02+ AGATCAAGAATTCAAATAACTTTCTGGTAAATTTAAAAAATTTCAGAAACATTATTGGAG
rJMFF010P05+ AGATCAAGAATTCAAATAACTTTCTGGTAAATTTAAAAAATTTCAGAAACATTATTGGAG
rJMFF012B22+ AGATCAAGAATTCAAATAACTTTCTGGTAAATTTAAAAAATTTCAGAAACATTATTGGAG
rJMFF021N10+ AGATCAAGAATTCAAATAACTTTCTGGTAAATTTAAAAAATTTCAGAAACATTATTGGAG
rJMFF021F10+ AGATCAAGAATTCAAATAACTTTCTGGTAAATTTAAAAAATTTCAGAAACATTATTGGAG
____________________________________________________________
consensus AGATCAAGAATTCAAATAACTTTCTGGTAAATTTAAAAAATTTCAGAAACATTATTGGAG
. : . : . : . : . : . :
rJMSF050G04+ CATGAAAATTAAGAAAAAACATTAGCTCTGTAATCACT
rJMFF015P02+ CATGAAAATTAAGAAAAAACATTAGCTCTGTAATCACTGTGTTAAATCAAAT
rJMFF017I02+ CATGAAAATTAAGAAAAAACATTAGCTCTGTAATCACTGTGTTAAATCAAATTGCACAAA
rJMFF010P05+ CATGAAAATTAAGAAAAAACATTAGCTCTGTAATCACTGTGTTAAATCAAATTGCACAAA
rJMFF012B22+ CATGAAAATTAAGAAAAAACATTAGCTCTGTAATCACTGTGTTAAATCAAATTGCACAAA
rJMFF021N10+ CATGAAAAT
rJMFF021F10+ CATGAAAATTAAGAAAAAACATTAGCTCTGTAATCACTGTGTTAAATCAAATTGCACAAA
____________________________________________________________
consensus CATGAAAATTAAGAAAAAACATTAGCTCTGTAATCACTGTGTTAAATCAAATTGCACAAA
. : . : . : . : . : . :
rJMFF017I02+ A
rJMFF010P05+ A
rJMFF012B22+ ATGAAATTTCATTTGCTTCCTAGGTAGCAGCTATCAAAGAATCACTGTGTCTCAAGAACA
rJMFF021F10+ ATGAAATTTCATTTGCTTCCTAGGTAGCAGCTATCAAAGAATCACTGTGTCTCAAGAACA
____________________________________________________________
consensus ATGAAATTTCATTTGCTTCCTAGGTAGCAGCTATCAAAGAATCACTGTGTCTCAAGAACA
. : . : . : . : . : . :
rJMFF012B22+ CAAGACACCGGCAAATCATTTCTATGTTCATCGGCATTATGTTACGTCTT
rJMFF021F10+ CAAGACACCGGCAAATCATTTCTATGTTCATCGGCATTATGTTACGTCTTTCATATCAGT
____________________________________________________________
consensus CAAGACACCGGCAAATCATTTCTATGTTCATCGGCATTATGTTACGTCTTTCATATCAGT