| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP003H01 | Sequence | 224 | 010118 (3) | 620 | 002570 (7) | ref|XP_011081971.1| | 2e-69 | PREDICTED: patatin-like protein 1 [Sesamum indicum] | |||
| JMCP007A06 | Sequence | 467 | 002570 (7) | ref|XP_006374978.1| | 8e-52 | hypothetical protein POPTR_0014s03290g [Populus trichocarpa] gb|ERP52775.1| hypo | |||||
| JMFF002J02 | Sequence | 418 | 013314 (46) | ref|XP_007202991.1| | 8e-42 | hypothetical protein PRUPE_ppa019010mg [Prunus persica] gb|EMJ04190.1| hypotheti | 654 | 002570 (7) | ref|XP_009797490.1| | 2e-75 | PREDICTED: patatin-like protein 2 [Nicotiana sylvestris] |
| JMFF018I14 | Sequence | 459 | 013314 (46) | ref|XP_004288052.1| | 7e-44 | PREDICTED: patatin-like protein 1 [Fragaria vesca subsp. vesca] | 376 | 002570 (7) | ref|XP_009626816.1| | 5e-16 | PREDICTED: patatin-like protein 3 [Nicotiana tomentosiformis] |
| JMFF026B15 | Sequence | 432 | 013314 (46) | ref|XP_004288052.1| | 2e-43 | PREDICTED: patatin-like protein 1 [Fragaria vesca subsp. vesca] | 577 | 002570 (7) | ref|XP_010664934.1| | 7e-67 | PREDICTED: patatin-like protein 2 [Vitis vinifera] |
| JMFF031E18 | Sequence | 457 | 013314 (46) | ref|XP_004288052.1| | 7e-44 | PREDICTED: patatin-like protein 1 [Fragaria vesca subsp. vesca] | 624 | 002570 (7) | ref|XP_002282366.2| | 9e-76 | PREDICTED: patatin-like protein 2 [Vitis vinifera] |
| JMFS169G06 | Sequence | 548 | 002570 (7) | gb|EYU21992.1| | 5e-50 | hypothetical protein MIMGU_mgv1a024079mg, partial [Erythranthe guttata] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF002J02+ GTCCGACATATGCATCGGAAC
____________________________________________________________
consensus GTCCGACATATGCATCGGAAC
. : . : . : . : . : . :
rJMFF002J02+ CTCCGCCGCTNCCGACGTACTTACCCGGCCATTACTTCGAGACCACCGACGCTAACGGCG
rJMCP003H01- TTCGAGACCACCGACGCTAACGGCG
rJMFF026B15+ GGCG
rJMCP007A06- TTCGAGACCACCGACGCTAACGGCG
rJMFF031E18+ CTCCGACGTACTTACCCGGCCATTACTTCGAGACCACCGACGCTAACGGCG
____________________________________________________________
consensus CTCCGCCGCTTCCGACGTACTTACCCGGCCATTACTTCGAGACCACCGACGCTAACGGCG
. : . : . : . : . : . :
rJMFF002J02+ CAAAGGTCGAGTACAACCTCGTCGACGGCGGTGTAGCAGCAAACAATCCGACTCTTGTGG
rJMCP003H01- CAAAGGTCGAGTACAACCTTGTCGACGGCGGTGTAGCAGCAAACAATCCGACTCTTGTGG
rJMFF026B15+ CAAAGGTCGAGTACAACNTCGTCGACGGCGGTGTAGCAGCAAACAATCCGACTCTTGTGG
rJMCP007A06- CACAGGTCGAGTACAACCTCGTCGACGGCGGTGTAGCAGCAAACAATCCGACTCTTGTGG
rJMFF031E18+ CAAAGGTCGAGTACAACCTCGTCGACGGCGGTGTAGCAGCAAACAATCCGACTCTTGTGG
____________________________________________________________
consensus CAAAGGTCGAGTACAACCTCGTCGACGGCGGTGTAGCAGCAAACAATCCGACTCTTGTGG
. : . : . : . : . : . :
rJMFF002J02+ TGACGCAAAGGATGGTCACTAAGGATCCGAAGTTCTTGTTAGATAACCCGTCGAAGCAGC
rJMCP003H01- TGACGCAAtGGATGGTCACTAAGGATCCGAAGTTCTTGTTAGATAACCCGTCGAAGCAGC
rJMFF026B15+ TGACGCAAAGGATGGTCACTAAGGATCCGAAGTTCTTGTTAGATAACCCGTCGAAGCAGC
rJMCP007A06- TGACGCAAAGGATGGTCACTAAGGATCCGAAGTTCTTGTTAGATAACCCGTCGAAGCAGC
rJMFF031E18+ TGACGCAAAGGATGGTCACTAAGGATCCGAAGTTCTTGTTAGATAACCCGTCGAAGCAGC
____________________________________________________________
consensus TGACGCAAAGGATGGTCACTAAGGATCCGAAGTTCTTGTTAGATAACCCGTCGAAGCAGC
. : . : . : . : . : . :
rJMFF002J02+ CGATTGGGTGCCACCGGTTCTTGATATTGTCGATCGGCACCGGCACGGCGAAATACGATT
rJMCP003H01- CGATTGGGTGCCACCGGTTCTTGATATTGTCGATCGGCACCGGCACGGCGAAATACGATT
rJMFF026B15+ CGATTGGGTGCCACCGGTTCTTGATATTGTCGATCGGCACCGGCACGGCGAAATACGATT
rJMCP007A06- CGATTGGGTGCCACCGGTTCTTGATATTGTCGATCGGCACCGGCACGGCGAAATACGATT
JMFS169G06- CACGGCGAAATACGATT
rJMFF031E18+ CGATTGGGTGCCACCGGTTCTTGATATTGTCGATCGGCACCGGCACGGCGAAATACGATT
____________________________________________________________
consensus CGATTGGGTGCCACCGGTTCTTGATATTGTCGATCGGCACCGGCACGGCGAAATACGATT
. : . : . : . : . : . :
rJMFF002J02+ CCAAGTACACGGCGAAGCAGGCGGCGGCGTGGGGTGTTTTGGGGTGGCTGTCTCAAGGGG
rJMCP003H01- CCAAGTACACGGCGAAGCAGGCGGCGGCGTGGGGTGTTTTGGGGTGGCTGTCTCAAGGGG
rJMFF026B15+ CCAAGTACACGGCGAAGCAGGCGGCGGCGTGGGGTGTTTTGGGGTGGCTGTCTCAAGGGG
rJMCP007A06- CCAAGTACACGGCGAAGCAGGCGGCGGCGTGGGGTGTTTTGGGGTGGCTGTCTCAAGGGG
JMFS169G06- CCAAGTACACGGCGAAGCAGGCGGCGGCGTGGGGTGTTTTGGGGTGGCTGTCTCAAGGGG
rJMFF031E18+ CCAAGTACACGGCGAAGCAGGCGGCGGCGTGGGGTGTTTTGGGGTGGCTGTCTCAAGGGG
____________________________________________________________
consensus CCAAGTACACGGCGAAGCAGGCGGCGGCGTGGGGTGTTTTGGGGTGGCTGTCTCAAGGGG
. : . : . : . : . : . :
rJMFF002J02+ ACGGCAACCCTTTGATTGATGTGTTCTCCGATGCAAGTTCGGATATGGTGGATTATCATA
rJMCP003H01- ACGGCAACCCTTTGATTGATGTGTTCTCCGATGCAAGTTCGGATATGGTGGATTATCATA
rJMFF026B15+ ACGGCAACCCTTTGATTGATGTGTTCTCCGATGCAAGTTCGGATATGGTGGATTATCATA
rJMCP007A06- ACGGCAACCCTTTGATTGATGTGTTCTCCGATGCAAGTTCGGATATGGTGGATTATCATA
JMFS169G06- ACGGCAACCCTTTGATTGATGTGTTCTCCGATGCAAGTTCGGATATGGTGGATTATCATA
rJMFF031E18+ ACGGCAACCCTTTGATTGATGTGTTCTCCGATGCAAGTTCGGATATGGTGGATTATCATA
rJMFF018I14+ ATGGTGGANTATCATA
____________________________________________________________
consensus ACGGCAACCCTTTGATTGATGTGTTCTCCGATGCAAGTTCGGATATGGTGGATTATCATA
. : . : . : . : . : . :
rJMFF002J02+ TCGCCACCATTTTCCAAGCCCTTAATTCCGGAGATAATTATCTCCGTATTCAGGAGGAAA
rJMCP003H01- TCGCCACCATTTTCCAAGCCCTTAATTCCGGAGATAATTATCTCCGTATTCAGGAGGAAA
rJMFF026B15+ TCGCCACCATTTTCCAAGCCCTTAATTCCGGAGATAATTATCTCCGTATTCAGGAGGAAA
rJMCP007A06- TCGCCACCATTTTCCAAGCCCTTAATTCCGGAGATAATTATCTCCGTATTCAGGAGGAAA
JMFS169G06- TCGCCACCATTTTCCAAGCCCTTAATTCCGGAGATAATTATCTCCGTATTCAGGAGGAAA
rJMFF031E18+ TCGCCACCATTTTCCAAGCCCTTAATTCCGGAGATAATTATCTCCGTATTCAGGAGGAAA
rJMFF018I14+ TCGCCNCCATTTTCCAANCCCTTANTTCCNGAGATAATTATCTCNGTATTNAGGAGGAAA
____________________________________________________________
consensus TCGCCACCATTTTCCAAGCCCTTAATTCCGGAGATAATTATCTCCGTATTCAGGAGGAAA
. : . : . : . : . : . :
rJMFF002J02+ ATTTACAAGGGACAGCATCCTCGGTGGATGTTTCGACAAAGGAAAACTTGAATGCGCTTG
rJMCP003H01- ATTTACAAGGGACAGCATCCTCGGTGGATGTTTCGACAAAGGAAAACTTGAATGCGCTTG
rJMFF026B15+ ATTTACAAGGGACAGCATCCTCGGTGGATGTTTCGACAAAGGAAAACTTGAATGCGCTTG
rJMCP007A06- ATTTACAAGGGACAGCATCCTCGGTGGATGTTTCGACttAGGAAAACTTGAATGCGCTTG
JMFS169G06- ATTTACAAGGGACAGCATCCTCGGTGGATGTTTCGACAAAGGAAAACTTGAATGCGCTTG
rJMFF031E18+ ATTTACAAGGGACAGCATCCTCGGTGGATGTTTCGACAAAGGAAAACTTGAATGCGCTTG
rJMFF018I14+ ATNTACAAGGGNCAGCATCCTCGGNGGANGTTTCGACAAAGGAAAACTNGAANGCGCTTG
____________________________________________________________
consensus ATTTACAAGGGACAGCATCCTCGGTGGATGTTTCGACAAAGGAAAACTTGAATGCGCTTG
. : . : . : . : . : . :
rJMFF002J02+ AACAGATTGGGAAAAACTTGTTGAAGAAAGCAGTTTCCAAGTTGAATCTCTTTACAGGGC
rJMCP003H01- AACAGATTGGGAAAAACTTGTTGAAGAAAGCAGTTTCCAAGTTGAATCTCTTTACAGGGC
rJMFF026B15+ AACAGATTGGGAAAAACTTGTTGAAGAAAGCAGTTTCCAAGTTGAATCTCTTTACAGGGC
rJMCP007A06- AACAGAaacGGAAAAACTTGTT
JMFS169G06- AACAGATTGGGAAAAACTTGTTGAAGAAAGCAGTTTCCAAGTTGAATCTCTTTACAGGGC
rJMFF031E18+ AACAGATTGGGAAAAACTTGTTGAAGAAAGCAGTTTCCAAGTTGAATCTCTTTACAGGGC
rJMFF018I14+ AACAGATTGGGANAAACTNGGNGAAGAAAGCAGTTTCCAANNNGAATCTCTTTACANGNC
____________________________________________________________
consensus AACAGATTGGGAAAAACTTGTTGAAGAAAGCAGTTTCCAAGTTGAATCTCTTTACAGGGC
. : . : . : . : . : . :
rJMFF002J02+ AGTATGAACCCATCGAAGGAGCTGGAACAAACCAAGATGCTCTGAAAAGGTTTGCTAAAT
rJMCP003H01- AGTATGAACCCATCGAAGGAGCTGGAACAAACCAAGATGCTCTGAAAAGGTTTGCTAAAT
rJMFF026B15+ AGTATGAACCCATCGAAGGAGCTGGAACAAACCAAGATGCTCTGAAAAGGTTTGCTAAAT
JMFS169G06- AGTATGAACCCATCGAAGGAGCTGGAACAAACCAAGATGCTCTGAAAAGGTTTGCTAAAT
rJMFF031E18+ AGTATGAACCCATCGAAGGAGCTGGAACAAACCAAGATGCTCTGAAAAGGTTTGCTAAAT
rJMFF018I14+ AGTANGNNCCCATAGAAGGANNTGGAACNANCCAAGANGCTCCGAAAAGGTTTGATAAAT
____________________________________________________________
consensus AGTATGAACCCATCGAAGGAGCTGGAACAAACCAAGATGCTCTGAAAAGGTTTGCTAAAT
. : . : . : . : . : . :
rJMFF002J02+ TGCTCTCTGAAGAGAGAAAACGCCGAATCACCG
rJMCP003H01- TGCTCTCTGAAGAGAGAAAACGCCGAATC
rJMFF026B15+ TGCTCTCTGAAGAGAGAAAACGCCGAATCACCG
JMFS169G06- TGCTCTCTGAAGAGAGAAAACGCCGAATC
rJMFF031E18+ TGCTCTCTGAAGAGAGAAAACGCCGAATCACCG
rJMFF018I14+ TGCTCTCTGAAGAGANAAAACGCNGAATCACCGTGTANANCGACGGCCAGTAACCAACNN
____________________________________________________________
consensus TGCTCTCTGAAGAGAGAAAACGCCGAATCACCGTGTANANCGACGGCCAGTAACCAACNN
. : . : . : . : . : . :
rJMFF018I14+ GATGANGTGTGATCTCTAATGTAATACTTCTTTGAGATGGAGTGTTATNAATTTATGGTT
____________________________________________________________
consensus GATGANGTGTGATCTCTAATGTAATACTTCTTTGAGATGGAGTGTTATNAATTTATGGTT