| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF016F18 | Sequence | 604 | 014174 | ref|XP_006354655.1| | 2e-39 | PREDICTED: putative casein kinase II subunit beta-4-like [Solanum tuberosum] | 467 | 002560 (8) | |||
| JMFF022C15 | Sequence | 513 | 002560 (8) | ref|XP_009794195.1| | 3e-17 | PREDICTED: putative casein kinase II subunit beta-4 [Nicotiana sylvestris] | 719 | 002560 (8) | ref|XP_009794195.1| | 2e-118 | PREDICTED: putative casein kinase II subunit beta-4 [Nicotiana sylvestris] |
| JMFF036E05 | Sequence | 547 | 002560 (8) | ref|XP_004300307.1| | 1e-19 | PREDICTED: casein kinase II subunit beta isoform X2 [Fragaria vesca subsp. vesc | 679 | 002560 (8) | ref|XP_004300307.1| | 3e-19 | PREDICTED: casein kinase II subunit beta isoform X2 [Fragaria vesca subsp. vesc |
| JMSF026B01 | Sequence | 575 | 023200 | ref|XP_006354655.1| | 5e-17 | PREDICTED: putative casein kinase II subunit beta-4-like [Solanum tuberosum] | 729 | 002560 (8) | ref|XP_011465202.1| | 1e-68 | PREDICTED: casein kinase II subunit beta isoform X1 [Fragaria vesca subsp. vesc |
| JMSF046N11 | Sequence | 796 | 002560 (8) | ref|XP_006354655.1| | 2e-64 | PREDICTED: putative casein kinase II subunit beta-4-like [Solanum tuberosum] | 705 | 002560 (8) | ref|XP_011085679.1| | 6e-138 | PREDICTED: casein kinase II subunit beta-like [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMFF022C15- GAGAAAGAGAACCTCACAAGTTACAGGGCTGTCCTCTCTGTAGACAAAGA
JMSF046N11- GAAAGAGAACCTCACAAGTTACAGGGCTGTCCTCTCTGTAGACAAAGA
____________________________________________________________
consensus GAGAAAGAGAACCTCACAAGTTACAGGGCTGTCCTCTCTGTAGACAAAGA
. : . : . : . : . : . :
JMFF022C15- AACCCTAATTATCTCCGTCTCTTTCTAACACATTATGCACAGAGAGTTTATGACTTTATT
JMSF046N11- AACCCTAATTATCTCCGTCTCTTTCTAACACATTATGCACAGAGAGTTTATGACTTTATT
____________________________________________________________
consensus AACCCTAATTATCTCCGTCTCTTTCTAACACATTATGCACAGAGAGTTTATGACTTTATT
. : . : . : . : . : . :
JMFF022C15- CGCATCTCAACTTCTCAAAATCTTTTTGATTTTCTCAGCCTCAATCCCCCTTCGATTTTA
JMSF046N11- CGCATCTCAACTTCTCAAAATCTTTTTGATTTTCTCAGCCTCAATCCCCCTTCGATTTTA
____________________________________________________________
consensus CGCATCTCAACTTCTCAAAATCTTTTTGATTTTCTCAGCCTCAATCCCCCTTCGATTTTA
. : . : . : . : . : . :
JMFF022C15- CTGCCATATCTAGGGTTTTTCCCTCTCCCATGGAATCCCACCTGTAAATACCGCATATCT
JMSF046N11- CTGCCATATCTAGGGTTTTTCCCTCTCCCATGGAATCCCACCTGTAAATACCGCATATCT
____________________________________________________________
consensus CTGCCATATCTAGGGTTTTTCCCTCTCCCATGGAATCCCACCTGTAAATACCGCATATCT
. : . : . : . : . : . :
JMFF022C15- ACGTAGCTTCGCAAATATATTGTTGGATACGAAGCACTGTAATAGTTTGAGGCAGAAGCA
JMSF046N11- ACGTAGCTTCGCAAATATATTGTTGGATACGAAGCACTGTAATAGTTTGAGGCAGAAGCA
____________________________________________________________
consensus ACGTAGCTTCGCAAATATATTGTTGGATACGAAGCACTGTAATAGTTTGAGGCAGAAGCA
. : . : . : . : . : . :
JMFF022C15- AGACATGTACAGGGATCGCGGAGGCGGAGGCGGAGGAGGGTCGTCGAAGTCGGAGATCGT
JMSF046N11- AGACATGTACAGGGATCGCGGAGGCGGAGGCGGAGGAGGGTCGTCGAAGTCGGAGATCGT
____________________________________________________________
consensus AGACATGTACAGGGATCGCGGAGGCGGAGGCGGAGGAGGGTCGTCGAAGTCGGAGATCGT
. : . : . : . : . : . :
JMFF022C15- GGGCGGGGCGTTGGATCGGAAGCGAATCAACGATGCGTTGGATAAGCACTTGGAGAAGTT
JMSF046N11- GGGCGGGGCGTTGGATCGGAAGCGAATCAACGATGCGTTGGATAAGCACTTGGAGAAGTT
____________________________________________________________
consensus GGGCGGGGCGTTGGATCGGAAGCGAATCAACGATGCGTTGGATAAGCACTTGGAGAAGTT
. : . : . : . : . : . :
JMFF022C15- GTCGCCTTCCACCTCC
JMSF046N11- GTCGCCTTCCACCTCCAAGTCCTCCAAGGAGAAGGCAGTGTCCTCCATCGCCGCCGGCGC
____________________________________________________________
consensus GTCGCCTTCCACCTCCAAGTCCTCCAAGGAGAAGGCAGTGTCCTCCATCGCCGCCGGCGC
. : . : . : . : . : . :
JMSF046N11- CGGTGGAAAATTGCATCAGCATCATCAGCAGCAAATCGACCACCGCGACAATCGATCATC
____________________________________________________________
consensus CGGTGGAAAATTGCATCAGCATCATCAGCAGCAAATCGACCACCGCGACAATCGATCATC
. : . : . : . : . : . :
JMSF046N11- CTCTGCTTTTGCTGCCAAAAACAAGTGCTCTGAGGAATCTGAAACAGACAGTGAAGATTC
____________________________________________________________
consensus CTCTGCTTTTGCTGCCAAAAACAAGTGCTCTGAGGAATCTGAAACAGACAGTGAAGATTC
. : . : . : . : . : . :
JMSF046N11- CGATGTTAGTGGTTCTGATGGGGATGATACATCATGGATTTCATGGTTCTGCAACCTCCG
rJMSF046N11+ GGGGATGATACATCATGGATTTCATGGTTCTGCAACCTCCG
____________________________________________________________
consensus CGATGTTAGTGGTTCTGATGGGGATGATACATCATGGATTTCATGGTTCTGCAACCTCCG
. : . : . : . : . : . :
JMSF046N11- AGGAAACGAATTCTTCTGTGAGGTTGACGATGAATATATTCAAGATGATTTCAATCTTTG
rJMSF046N11+ AGGAAACGAATTCTTCTGTGAGGTTGACGATGAATATATTCAAGATGATTTCAATCTTTG
rJMFF022C15+ TTGACGATGAATATATTCAAGATGATTTCAATCTTNG
____________________________________________________________
consensus AGGAAACGAATTCTTCTGTGAGGTTGACGATGAATATATTCAAGATGATTTCAATCTTTG
. : . : . : . : . : . :
JMSF046N11- TGGGTTGAGCAGTCAAGTTCCATACTACGATTATGCACTTGACCTTATTCTTGATGTTGA
rJMSF046N11+ TGGGTTGAGCAGTCAAGTTCCATACTACGATTATGCACTTGACCTTATTCTTGATGTTGA
rJMFF022C15+ TGGGTTGAGCAGTCAAGTTCCATACTACGATTATGCACTTGACCTTATTCTTGATGTTGA
____________________________________________________________
consensus TGGGTTGAGCAGTCAAGTTCCATACTACGATTATGCACTTGACCTTATTCTTGATGTTGA
. : . : . : . : . : . :
JMSF046N11- ATCCTCACATGGTGATATGTTTACTGAA
rJMSF046N11+ ATCCTCACATGGTGATATGTTTACTGAAGAGCAGAATGAACTTGTTGAATCGGCAGCAGA
rJMFF022C15+ ATCCTCACATGGTGATATGTTTACTGAAGAGCAGAATGAACTTGTTGAATCGGCAGCAGA
____________________________________________________________
consensus ATCCTCACATGGTGATATGTTTACTGAAGAGCAGAATGAACTTGTTGAATCGGCAGCAGA
. : . : . : . : . : . :
rJMSF046N11+ GATGTTATATGGTCTTATTCATGTGCGATACATATTGACTAGCAAGGGAATGGCTGCGAT
rJMFF022C15+ GATGTTATATGGTCTTATTCATGTGCGATACATATTGACTAGCAAGGGAATGGCTGCGAT
____________________________________________________________
consensus GATGTTATATGGTCTTATTCATGTGCGATACATATTGACTAGCAAGGGAATGGCTGCGAT
. : . : . : . : . : . :
rJMSF046N11+ GCTAGAGAAGTACAAAAACTATGACTTTGGGAGATGCCCACGAGTTTTNTGCTGTGGCCA
rJMFF022C15+ GCTAGAGAAGTACAAAAACTATGACTTTGGGAGATGCCCACGAGTTTTCTGCTGTGGCCA
rJMSF026B01+ TAGACAAGTACAAAAACTATGATTTTGGGAGGTGCCCACGAGTTTATTGCTGTGGACA
____________________________________________________________
consensus GCTAGAGAAGTACAAAAACTATGACTTTGGGAGATGCCCACGAGTTTTTTGCTGTGGCCA
. : . : . : . : . : . :
rJMSF046N11+ GCCTTGCCTCCCTGTTGGGCAGTCGGACATTCCGCGATCAAGCACTGTCAAAATATATTG
rJMFF022C15+ GCCTTGCCTCCCTGTTGGGCAGTCGGACATTCCGCGATCAAGCACTGTCAAAATATATTG
rJMSF026B01+ GCCTTGCCTTCCTGTTGGGCAGTCTGACATTCCACGCTCAAGTACTGTTAAAATATATTG
____________________________________________________________
consensus GCCTTGCCTCCCTGTTGGGCAGTCGGACATTCCGCGATCAAGCACTGTCAAAATATATTG
. : . : . : . : . : . :
rJMSF046N11+ CCCGAAGTGTGAAGACATNTACTATCCACGATCAAAGTACCAAGGCAATATCGATGGAGC
rJMFF022C15+ CCCGAAGTGTGAAGACATCTACTATCCACGATCAAAGTACCAAGGCAATATCGATGGAGC
JMFF036E05- GGAGC
rJMSF026B01+ CCCAAGATGCGAAGATATCTACTATCCACGATCCAAGTACCAAGGAAATATTGACGGAGC
rJMFF036E05+ GGAGC
____________________________________________________________
consensus CCCGAAGTGTGAAGACATCTACTATCCACGATCAAAGTACCAAGGCAATATCGATGGAGC
. : . : . : . : . : . :
rJMSF046N11+ TTATTTTGGAACAACATTTCCTCATCTCTTTTTGATGACGTATGGACACCTTAAGCCTCA
rJMFF022C15+ TTATTTTGGAACAACATTTCCTCATCTCTTTTTGATGACGTATGGACACCTTAAGCCTCA
JMFF036E05- TTATTTTGGGACTACATTTCCTCACCTCTTTTTGATGACTTATGGACACCTCAAGCCACA
rJMSF026B01+ TTATTTNGGGACTACATTTCCTCACCTNTTTTTGATGACTTATGGACACCTCAAGCCACA
rJMFF036E05+ TTATTTTGGGACTACATTTCCTCACCTCTTTTTGATGACTTATGGACACCTCAAGCCACA
____________________________________________________________
consensus TTATTTTGGGACTACATTTCCTCACCTCTTTTTGATGACTTATGGACACCTCAAGCCACA
. : . : . : . : . : . :
rJMSF046N11+ GAAACCATCTCAGAGCTATGTTCCGAAGGTATTCGGCTTCAAGCTTCACAAG
rJMFF022C15+ GAAACCATCTCAGAGCTATGTTCCGAAGGTATTCGGCTTCAAGCTTCACAAG
JMFF036E05- AAAACCAAGTCAGAGCTATATCCCAAAAGTATTCGGCTTCAAACTCCACAAGCCATGAAA
rJMSF026B01+ AAAACCAAGTCAGAGCTATATCCCAAAAGTATTCGGCTTCAAACTCCACAAGCCATGAAA
rJMFF036E05+ AAAACCAAGTCAGAGCTATATCCCAAAAGTATTCGGCTTCAAACTCCACAAGCCATGAAA
____________________________________________________________
consensus AAAACCAAGTCAGAGCTATATCCCAAAAGTATTCGGCTTCAAACTCCACAAGCCATGAAA
. : . : . : . : . : . :
JMFF036E05- ATAAGTGGTGGCATTGTGTTGGGATAATCATTTTTCTTCCAAGAGAACTCCGATCTGGCT
rJMSF026B01+ ATAAGTGGTGGCATTGTGTTGGGATAATCATTTTTNNTCCAAGAGAACTCCGATCTGGCT
rJMFF036E05+ ATAAGTGGTGGCATTGTGTTGGGATAATCATTTTTCTTCCAAGAGAACTCCGATCTGGCT
____________________________________________________________
consensus ATAAGTGGTGGCATTGTGTTGGGATAATCATTTTTCTTCCAAGAGAACTCCGATCTGGCT
. : . : . : . : . : . :
JMFF036E05- CCCTTGATGTGCAAGTCGTTAGCAGCCAGGTAAAGCAAAGCGGTCTTTGATATGCAGGAA
rJMSF026B01+ CCCTTGATGTGCAAGTCGTTAGCAGCCAGGTAAAGCAAAGCGGTCTTTGATATGCAGGAA
rJMFF036E05+ CCCTTGATGTGCAAGTCGTTAGCAGCCAGGTAAAGCAAAGCGGTCTTTGATATGCAGGAA
____________________________________________________________
consensus CCCTTGATGTGCAAGTCGTTAGCAGCCAGGTAAAGCAAAGCGGTCTTTGATATGCAGGAA
. : . : . : . : . : . :
JMFF036E05- CTACTTTGTTGATAAAACAGAAAGCACCTATACCCAGTCTGTCAAGCTAAACTCGTGCCT
rJMSF026B01+ CTACTTTGTTGATAAAACAGAAAGCACCTATACCCAGTCTGTCAAGCTAAACTCGTGCCT
rJMFF036E05+ CTACTTTGTTGATAAAACAGAAAGCACCTATACCCAGTCTGTCAAGCTAAACTCGTGCCT
____________________________________________________________
consensus CTACTTTGTTGATAAAACAGAAAGCACCTATACCCAGTCTGTCAAGCTAAACTCGTGCCT
. : . : . : . : . : . :
JMFF036E05- TAGTCTGCACTGTGAATTTANGCGTGCATTTTTCTATCCTGGNTGATAATTGTCATC
rJMSF026B01+ TAGTCTGCACTGTGAATTTAGGCGTGCATTTTTCTATCCTGGTTGATAATTGTCATCAGT
rJMFF036E05+ TAGTCTGCACTGTGAATTTAGGCGTGCATTTTTCTATCCTGGTTGATAATTGTCATCAGT
rJMFF016F18+ GAATTTAGGCGTGCATTTTTCTANCCTGGTTGATAATTGTCATCAGT
____________________________________________________________
consensus TAGTCTGCACTGTGAATTTAGGCGTGCATTTTTCTATCCTGGTTGATAATTGTCATCAGT
. : . : . : . : . : . :
rJMSF026B01+ AACCAACTTTGTACTTATATGTTTATACTTTAATTTCTTCCCCCACCCCCAACCCCACTC
rJMFF036E05+ AACCAACTTTGTACTTATATGTTTATACTTTAATTTCTTCCCCCACCCCCAACCCCACTC
rJMFF016F18+ AACCAACTTTGTACNTATATGTTTATACTTTAATTTCTTCCCCCACCCCCAACCCCACTC
____________________________________________________________
consensus AACCAACTTTGTACTTATATGTTTATACTTTAATTTCTTCCCCCACCCCCAACCCCACTC
. : . : . : . : . : . :
rJMSF026B01+ CACCCCTCTCAAGTCTCAAGTGTTACAAGTTTCATTTAATGGTGAAGGTAATGTACCAAT
rJMFF036E05+ CACCCCTCTCAAGTCTCAAGTGTTACAAGTTTCATTTAATGGTGAAGGTAATGTACCAAT
rJMFF016F18+ CACCCCTCTCAAGTCTCAAGTGNTACAAGTTTCATTTAATGGTGAAGGTAATGTACCAAT
____________________________________________________________
consensus CACCCCTCTCAAGTCTCAAGTGTTACAAGTTTCATTTAATGGTGAAGGTAATGTACCAAT
. : . : . : . : . : . :
rJMSF026B01+ TCCAGTCTTTTTTATAGCATTTTAACCCAAT
rJMFF036E05+ TCCAGTCTTTTTTATAGCATTTTAACCCAATTGTACATGGTCAGACCTGTTGGTATTTTC
rJMFF016F18+ TCCAGTCTTTTTTATAGCATTTTAACCCAATTGTACATGGTCAGACCTGTTGGTATTTTC
____________________________________________________________
consensus TCCAGTCTTTTTTATAGCATTTTAACCCAATTGTACATGGTCAGACCTGTTGGTATTTTC
. : . : . : . : . : . :
rJMFF036E05+ CTAGTTGAATGTTGGGTGACCAAACATCTGATATGG
rJMFF016F18+ CTAGTTGAATGTTGGGNGACCAAACATNTGATATGGNCCCTTTTAAATTTTTTTAATTTT
____________________________________________________________
consensus CTAGTTGAATGTTGGGTGACCAAACATCTGATATGGNCCCTTTTAAATTTTTTTAATTTT
. : . : . : . : . : . :
rJMFF016F18+ ATTATTACTATAAACAAACTNTNTAGATTNTGTACAGTTGTTATACCATGGACCAGGTCC
____________________________________________________________
consensus ATTATTACTATAAACAAACTNTNTAGATTNTGTACAGTTGTTATACCATGGACCAGGTCC
. : . : . : . : . : . :
rJMFF016F18+ ACCTTGCAAGGTGGACCNTGGTCCTAAATTGTGTATTTTTAGTCTTGGAATTGTGAACTT
____________________________________________________________
consensus ACCTTGCAAGGTGGACCNTGGTCCTAAATTGTGTATTTTTAGTCTTGGAATTGTGAACTT
. : . : . : . : . : . :
rJMFF016F18+ CTAGAATATAAATGGTGTTTCTAAGTTTTGAGAATTTGCGAATACAATACAAGGTCATAA
____________________________________________________________
consensus CTAGAATATAAATGGTGTTTCTAAGTTTTGAGAATTTGCGAATACAATACAAGGTCATAA