Contig 002546:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013G11Sequence527005261 (3)ref|XP_011098318.1|1e-06PREDICTED: probable ubiquitin-conjugating enzyme E2 26 [Sesamum indicum]748002546 (2)ref|XP_009626762.1|4e-75PREDICTED: probable ubiquitin-conjugating enzyme E2 25 [Nicotiana tomentosiform
JMSF043L11Sequence808005261 (3)ref|XP_009775370.1|112PREDICTED: uncharacterized protein LOC104225299 [Nicotiana sylvestris]762002546 (2)ref|XP_009626762.1|1e-91PREDICTED: probable ubiquitin-conjugating enzyme E2 25 [Nicotiana tomentosiform

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF043L11+ TGCGGAAAAGTATGCCTGAGCCTCCTCAACACTTGGAGTGGCCATGGGAAG
rJMFF013G11+ TCAACACTTGGAGTGGCCATGGGAAG
                      ____________________________________________________________
consensus TGCGGAAAAGTATGCCTGAGCCTCCTCAACACTTGGAGTGGCCATGGGAAG
 
. : . : . : . : . : . :
rJMSF043L11+ GAGAAGTGGATGCCTCGTGAATCAACCATGCTGCAGGTTTTGGTTTCTATACAAGGGCTG
rJMFF013G11+ GAGAAGTGGATGCCTCGTGAATCAACCATGCTGCAGGTTTTGGTTTCTATACAAGGGCTG
                      ____________________________________________________________
consensus GAGAAGTGGATGCCTCGTGAATCAACCATGCTGCAGGTTTTGGTTTCTATACAAGGGCTG
 
. : . : . : . : . : . :
rJMSF043L11+ ATTTTGAATGCAAAGCCCTATTTTAACGAGCCAGGATTTGCTGGATCCGAAGGGACAGTT
rJMFF013G11+ ATTTTGAATGCAAAGCCCTATTTTAACGAGCCAGGATTTGCTGGATCCGAAGGGACAGTT
                      ____________________________________________________________
consensus ATTTTGAATGCAAAGCCCTATTTTAACGAGCCAGGATTTGCTGGATCCGAAGGGACAGTT
 
. : . : . : . : . : . :
rJMSF043L11+ GCAGGGGAGAAGAGCTCGCTACAATACAATGAGAACACATATATCTCAAATCTCAGAACA
rJMFF013G11+ GCAGGGGAGAAGAGCTCGCTACAATACAATGAGAACACATATATCTCAAATCTCAGAACA
                      ____________________________________________________________
consensus GCAGGGGAGAAGAGCTCGCTACAATACAATGAGAACACATATATCTCAAATCTCAGAACA
 
. : . : . : . : . : . :
rJMSF043L11+ ATGCTTTACTCCATACGGAAGCCACCTAAGCATTTTGAGGATTTAGTCAAGGGACACTTT
rJMFF013G11+ ATGCTTTACTCCATACGGAAGCCACCTAAGCATTTTGAGGATTTAGTCAAGGGACACTTT
                      ____________________________________________________________
consensus ATGCTTTACTCCATACGGAAGCCACCTAAGCATTTTGAGGATTTAGTCAAGGGACACTTT
 
. : . : . : . : . : . :
rJMSF043L11+ GTTCTGCATGCTCAAGATGTTCTGGTGGCATGCAAAACATATATAGATGGTGCTCAAGTA
rJMFF013G11+ GTTCTGCATGCTCAAGATGTTCTGGTGGCATGCAAAACATATATAGATGGTGCTCAAGTA
                      ____________________________________________________________
consensus GTTCTGCATGCTCAAGATGTTCTGGTGGCATGCAAAACATATATAGATGGTGCTCAAGTA
 
. : . : . : . : . : . :
rJMSF043L11+ GGTAGCCTAGTTAGCGGAGGGGTGCAGGATGTTGATGAAGGTGACAAAAGCTGTTCAGAA
rJMFF013G11+ GGTAGCCTAGTTAGCGGAGGGGTGCAGGATGTTGATGAAGGTGACAAAAGCTGTTCAGAA
                      ____________________________________________________________
consensus GGTAGCCTAGTTAGCGGAGGGGTGCAGGATGTTGATGAAGGTGACAAAAGCTGTTCAGAA
 
. : . : . : . : . : . :
rJMSF043L11+ GTTTTCAAGAAATCTGTAGCAGGCCTCATCAAGACACTTGTAGAGTCATTTACTCAGGTT
rJMFF013G11+ GTTTTCAAGAAATCTGTAGCAGGCCTCATCAAGACACTTGTAGAGTCATTTACTCAGGTT
                      ____________________________________________________________
consensus GTTTTCAAGAAATCTGTAGCAGGCCTCATCAAGACACTTGTAGAGTCATTTACTCAGGTT
 
. : . : . : . : . : . :
rJMSF043L11+ GGCGCTAAGGATT-GCGATAAATTTCTATATCTAGCAGAAAAAGCGACCGTGCCTCTGCC
rJMFF013G11+ GGCGCTAAGGATTNGCGATAAATTTCTATATCTAGCAGAAAAAGCGACCGTGCCTCTGCC
                      ____________________________________________________________
consensus GGCGCTAAGGATTNGCGATAAATTTCTATATCTAGCAGAAAAAGCGACCGTGCCTCTGCC
 
. : . : . : . : . : . :
rJMSF043L11+ TGTTTCTGCATCTGTATCCTCCTATGCTTCTTATCATTATTACTGACCTGATGATTAAAG
rJMFF013G11+ TGTTTCTGCATCTGTATCCTCCTATGCTTCTTATCATTATTACTGACCTGATGATTAAAG
                      ____________________________________________________________
consensus TGTTTCTGCATCTGTATCCTCCTATGCTTCTTATCATTATTACTGACCTGATGATTAAAG
 
. : . : . : . : . : . :
rJMSF043L11+ GGAGTAGAGGGGCTGAGAATTTGGTCTTTAAACACAGAAAGGCATCTTGAAATTTAAGGT
rJMFF013G11+ GGAGTAGAGGGGCTGAGAATTTGGTCTTTAAACACAGAAAGGCATCTTGAAATTTAAGGT
                      ____________________________________________________________
consensus GGAGTAGAGGGGCTGAGAATTTGGTCTTTAAACACAGAAAGGCATCTTGAAATTTAAGGT
 
. : . : . : . : . : . :
rJMSF043L11+ TAACATAACAATCTAGCCTTGATGTTGATAATTACAAATCAGATTTGGTGGTTCTCTTTT
rJMFF013G11+ TAACATAACAATCTAGCCTTGATGTTGATAATTACAAATCAGATTTGGTGGTTCTCTTTT
                      ____________________________________________________________
consensus TAACATAACAATCTAGCCTTGATGTTGATAATTACAAATCAGATTTGGTGGTTCTCTTTT
 
. : . : . : . : . : . :
rJMSF043L11+ TAATTGGAGCTGTATATGATGTTTTGTTTATAAGTTAATCGATTTACTCATA
rJMFF013G11+ TAATTGGAGCTGTATATGATGTTTTGTTTATAAGTTAATCGATTTACTCATAGTGAATCG
                      ____________________________________________________________
consensus TAATTGGAGCTGTATATGATGTTTTGTTTATAAGTTAATCGATTTACTCATAGTGAATCG