Contig 002542:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012A08Sequence252004500 (3)806002542 (4)ref|XP_011090068.1|56.6PREDICTED: uncharacterized protein LOC105170843 [Sesamum indicum]
JMSF001K17Sequence211004500 (3)734002542 (4)ref|XP_011090068.1|55.1PREDICTED: uncharacterized protein LOC105170843 [Sesamum indicum]
JMSF008A19Sequence582002542 (4)
JMSF030D08Sequence245004500 (3)729002542 (4)ref|XP_011090068.1|55.1PREDICTED: uncharacterized protein LOC105170843 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF012A08+ AGTTTTGCCAAGGCTATACTTTGAGT
                      ____________________________________________________________
consensus AGTTTTGCCAAGGCTATACTTTGAGT
 
. : . : . : . : . : . :
rJMSF030D08+ CAAAACAATGAATTATTGCTCAGTGACCAACAA
rJMSF001K17+ CAAAACAATGAATTATTGCTCAGTGACCAACAA
rJMFF012A08+ GTAGCAGGGATATCCCCATTTTGGTTCCAAAACAATGAATTATTGCTCAGTGACCAACAA
                      ____________________________________________________________
consensus GTAGCAGGGATATCCCCATTTTGGTTCCAAAACAATGAATTATTGCTCAGTGACCAACAA
 
. : . : . : . : . : . :
rJMSF030D08+ AGCATGCCACCTGTGTTTGTAGGATCTATGCTTTACTCTGCTGAGAATGCTATGCCATCC
rJMSF001K17+ AGCATGCCACCTGTGTTTGTAGGATCTATGCTTTACTCTGCTGAGAATGCTATGCCATCC
rJMFF012A08+ AGCATGTCACCTGTGTTTGTAGGATCTATGCTTTACTCTGCTGAGAATGCTATGCCATCC
                      ____________________________________________________________
consensus AGCATGCCACCTGTGTTTGTAGGATCTATGCTTTACTCTGCTGAGAATGCTATGCCATCC
 
. : . : . : . : . : . :
rJMSF008A19+ ACTTTCATTCCA
rJMSF030D08+ ACTGCTACGTACAATTTTGAAGAGAGATCGAAAGTGCGTGGGACTGGAACTTTCATTCCA
rJMSF001K17+ ACTGCTACGTACAATTTTGAAGAGAGATCGAAAGTGCGTGGGACTGGAACTTTCATTCCA
rJMFF012A08+ ACTGCTACGTACAATTTTGAAGAGAGATCGAAAGTGCGTGGGACTGGAACTTTCATTCCA
                      ____________________________________________________________
consensus ACTGCTACGTACAATTTTGAAGAGAGATCGAAAGTGCGTGGGACTGGAACTTTCATTCCA
 
. : . : . : . : . : . :
rJMSF008A19+ ACCATGGTTAACACTTACAGGGATGACAGAGCATTGAGAGGAAAGGGGAAAAACAGGGCT
rJMSF030D08+ ACCATGGTTAACACTTACAGGGATGACAGAGCATTGAGAGGAAAGGGGAAAAACAGGGCT
rJMSF001K17+ ACCATGGTTAACACTTACAGGGATGACAGAGCATTGAGAGGAAAGGGGAAAAACAGGGCT
rJMFF012A08+ ACCATGGTTAACACTTACAGGGATGACAGAGCATTGAGAGGAAAGGGGAAAAACAGGGCT
                      ____________________________________________________________
consensus ACCATGGTTAACACTTACAGGGATGACAGAGCATTGAGAGGAAAGGGGAAAAACAGGGCT
 
. : . : . : . : . : . :
rJMSF008A19+ TTTGGGGGCCATGGNGTGCACCACCGAAGCACTTCTAGCAGAGGATGGGCTCCTGCATTG
rJMSF030D08+ TTTGGGGGCCATGGTGTGCACCACCGAAGCACTTCTAGCAGAGGATGGGCTCCTGCATTG
rJMSF001K17+ TTTGGGGGCCATGGTGTGCACCACCGAAGCACTTCTAGCAGAGGATGGGCTCCTGCATTG
rJMFF012A08+ TTTGGGGGCCATGGTGTGCACCACCGAAGCACTTCTAGCAGAGGATGGGCTCCTGCATTG
                      ____________________________________________________________
consensus TTTGGGGGCCATGGTGTGCACCACCGAAGCACTTCTAGCAGAGGATGGGCTCCTGCATTG
 
. : . : . : . : . : . :
rJMSF008A19+ CCCCCCAAGGATAGTGCTTCTGAAAACAGTAGCAGAGAGAGTTCACATGCATGGCCTGCA
rJMSF030D08+ CCCCCCAAGGATAGTGCTTCTGAAAACAGTAGCAGAGAGGGTTCACATGCATGGCCTGCA
rJMSF001K17+ CCCCCCAAGGATAGTGCTTCTGAAAACAGTAGCAGAGAGGGTTCACATGCATGGCCTGCA
rJMFF012A08+ CCCCCCAAGGATAGTGCTTCTGAAAACAGTAGCAGAGAGGGTTCACATGCATGGCCTGCA
                      ____________________________________________________________
consensus CCCCCCAAGGATAGTGCTTCTGAAAACAGTAGCAGAGAGGGTTCACATGCATGGCCTGCA
 
. : . : . : . : . : . :
rJMSF008A19+ GCAGCTCAAGAGCGCGGGAAATCTTCTGGATTCAGGCCATCTCATCATTCAGCTGGAGAT
rJMSF030D08+ GCAGCTCAAGAGCGCGGGAAATCTTCTGGATTCAGGCCATCTCATCATTCAGCTGGAGAT
rJMSF001K17+ GCAGCTCAAGAGCGCGGGAAATCTTCTGGATTCAGGCCATCTCATCATTCAGCTGGAGAT
rJMFF012A08+ GCAGCTCAAGAGCGCGGGAAATCTTCTGGATTCAGGCCATCTCATCATTCAGCTGGAGAT
                      ____________________________________________________________
consensus GCAGCTCAAGAGCGCGGGAAATCTTCTGGATTCAGGCCATCTCATCATTCAGCTGGAGAT
 
. : . : . : . : . : . :
rJMSF008A19+ TCTCGNGTCGGTGAATTTGGATATGCGAGGCAATATCCCGAGGGTGGCTCATATCAGGAA
rJMSF030D08+ TCTCGTGTCGGTGAATTTGGATATGCGAGGCAATATCCCGAGGGTGGTTCATATCAGGAA
rJMSF001K17+ TCTCGTGTCGGTGAATTTGGATATGCGAGGCAATATCCCGAGGGTGGCTCATATCAGGAA
rJMFF012A08+ TCTCGTGTCGGTGAATTTGGATATGCGAGGCAATATCCCGAGGGTGGCTCATATCAGGAA
                      ____________________________________________________________
consensus TCTCGTGTCGGTGAATTTGGATATGCGAGGCAATATCCCGAGGGTGGCTCATATCAGGAA
 
. : . : . : . : . : . :
rJMSF008A19+ AGGGCCACAACGAGATTCTCCCAGAGAGTGCCCTGTGCAAAACCTGTTTGGGGCAGAAAA
rJMSF030D08+ AGGGCCACAACGAGATTCTCCCAGAGAGTGCCCTGTGCAAAACCTGTTTGGGGCAGAAAA
rJMSF001K17+ AGGGCCACAACGAGATTCTCCCAGAGAGTGCCCTGTGCAAAACCTGTTTGGGGCAGAAAA
rJMFF012A08+ AGGGCCACAACGAGATTCTCCCATAGAGTGCCCTGTGCAAAACCTGTTTGGGGCAGAAAA
                      ____________________________________________________________
consensus AGGGCCACAACGAGATTCTCCCAGAGAGTGCCCTGTGCAAAACCTGTTTGGGGCAGAAAA
 
. : . : . : . : . : . :
rJMSF008A19+ GATAGGCTTGCAGATCAATCGTTGGCCCCCGAAGAATGATGAGTGTTTCTTCCCCCCCTT
rJMSF030D08+ GATAGGCTTGCAGATCAATCGTTGGCCCCCGAAGAATGATGAGTGTTTCTTCCCCCCCTT
rJMSF001K17+ GATAGGCTTGCAGATCAATCGTTGGCCCCCGAAGAATGATGAGTGTTTCTTCCCCCCCTT
rJMFF012A08+ GATAGGCTTGCAGATCAATCGTTGGCCCCCGAAGAATGATGAGTGTTTCTTCCCCCCCTT
                      ____________________________________________________________
consensus GATAGGCTTGCAGATCAATCGTTGGCCCCCGAAGAATGATGAGTGTTTCTTCCCCCCCTT
 
. : . : . : . : . : . :
rJMSF008A19+ GGCCTCTTTTGCATGTGAAGGGAAACTGTAGGTGCTAACTGAAGTGTAGAGATGGTATAG
rJMSF030D08+ GGCCTCTTTTGCATGTGAAGGGAAACTGTAGGTGCTAACTGAAGTGTAGAGATGGTATAG
rJMSF001K17+ GGCCTCTTTTGCATGTGAAGGGAAACTGTAGGTGCTAACTGAAGTGTAGAGATGGTATAG
rJMFF012A08+ GGCCTCTTTTGCATGTGAAGGGAAACTGTAGGTGCTAACTGAAGTGTAGAGATGGTATAG
                      ____________________________________________________________
consensus GGCCTCTTTTGCATGTGAAGGGAAACTGTAGGTGCTAACTGAAGTGTAGAGATGGTATAG
 
. : . : . : . : . : . :
rJMSF008A19+ GTGACTGACTTTTTCCCTTTTCCCTTTGTTAGTTGTTTTTGGCTGGTGAGGAATGTTTGT
rJMSF030D08+ GTGACTGACTTTTTCCCTTTTCCCTTTGTTAGTTGTTTTTGGCTGGTGAGGAATGTTTGT
rJMSF001K17+ GTGACTGACTTTTTCCCTTTTCCCTTTGTTAGTTGTTTTTGGCTGGTGAGGAATGTTTGT
rJMFF012A08+ GTGACTGACTTTTTCCCTTTTCCCTTTGTTAGTTGTTTTTGGCTGGTGAGGAATGTTTGT
                      ____________________________________________________________
consensus GTGACTGACTTTTTCCCTTTTCCCTTTGTTAGTTGTTTTTGGCTGGTGAGGAATGTTTGT
 
. : . : . : . : . : . :
rJMSF008A19+ AA
rJMSF030D08+ AA
rJMSF001K17+ AACAATGTTGGATGTTT
rJMFF012A08+ AACAATGTTGGATGTTTTCTCCCCCCTTGGCCCTTGCCTTGTATCAAANGAAAAAGAAAA
                      ____________________________________________________________
consensus AACAATGTTGGATGTTTTCTCCCCCCTTGGCCCTTGCCTTGTATCAAANGAAAAAGAAAA