| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007K12 | Sequence | 599 | 011488 (9) | ref|XP_009602562.1| | 5e-105 | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Nicotiana tomentosi | 738 | 002531 (10) | ref|XP_009602562.1| | 4e-79 | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Nicotiana tomentosi |
| JMFF009D18 | Sequence | 593 | 011488 (9) | ref|XP_009602562.1| | 4e-100 | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Nicotiana tomentosi | 737 | 002531 (10) | ref|XP_009602562.1| | 5e-67 | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Nicotiana tomentosi |
| JMFF009L08 | Sequence | 543 | 011488 (9) | dbj|BAL14273.1| | 6e-92 | FK506-binding protein [Nicotiana tabacum] | 660 | 002531 (10) | ref|XP_009602562.1| | 3e-68 | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Nicotiana tomentosi |
| JMFF013B04 | Sequence | 543 | 011488 (9) | ref|XP_009602562.1| | 2e-91 | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Nicotiana tomentosi | 686 | 002531 (10) | ref|XP_009602562.1| | 8e-65 | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Nicotiana tomentosi |
| JMFF022P17 | Sequence | 509 | 011488 (9) | ref|XP_009602562.1| | 5e-85 | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Nicotiana tomentosi | 694 | 002531 (10) | ref|XP_009803135.1| | 7e-73 | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Nicotiana sylvestri |
| JMFF051L20 | Sequence | 578 | 011488 (9) | ref|XP_009602562.1| | 4e-94 | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Nicotiana tomentosi | 513 | 002531 (10) | gb|EYU39186.1| | 1e-18 | hypothetical protein MIMGU_mgv1a003614mg [Erythranthe guttata] |
| JMSF044G15 | Sequence | 756 | 011488 (9) | ref|XP_009602562.1| | 5e-138 | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Nicotiana tomentosi | 758 | 002531 (10) | ref|XP_009803135.1| | 2e-82 | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Nicotiana sylvestri |
| JMSF049F12 | Sequence | 520 | 002531 (10) | gb|EYU39186.1| | 6e-33 | hypothetical protein MIMGU_mgv1a003614mg [Erythranthe guttata] | 481 | 002531 (10) | gb|EYU39186.1| | 4e-33 | hypothetical protein MIMGU_mgv1a003614mg [Erythranthe guttata] |
| JMSF050H20 | Sequence | 691 | 011488 (9) | ref|XP_009602562.1| | 5e-123 | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Nicotiana tomentosi | 749 | 002531 (10) | ref|XP_009803135.1| | 6e-78 | PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Nicotiana sylvestri |
This contig is upended
. : . : . : . : . : . :
rJMSF050H20+ GTCTTATGAAATTGAAC
rJMSF044G15+ ATGAAATTGAAC
____________________________________________________________
consensus GTCTTATGAAATTGAAC
. : . : . : . : . : . :
rJMFF022P17+ ATATGAACACCCAGGAGAAGATTGAGG
rJMSF050H20+ TTGTTTCTTTTGTC-AGGAAAGAGAATCATGGGATATGAACACCCAGGAGAAGATTGAGG
rJMSF044G15+ TTGTTTCTTTTGTCAAGGAAAGAGAATCATGGGATATGAACACCCAGGAGAAGATTGAGG
rJMFF007K12+ ATTGAGG
____________________________________________________________
consensus TTGTTTCTTTTGTCAAGGAAAGAGAATCATGGGATATGAACACCCAGGAGAAGATTGAGG
. : . : . : . : . : . :
rJMFF022P17+ CTGCAGGCAAAAAGAAGGAAGAAGGAAATGTACTTTTCAAGGCAGGCAAATACGCAAGAG
rJMSF050H20+ CTGCAGGCAAAAAGAAGGAAGAAGGAAATGTACTTTTCAAGGCAGGCAAATACGCAAGAG
rJMSF044G15+ CTGCAGGCAAAAAGAAGGAAGAAGGAAATGTACTTTTCAAGGCAGGCAAATACGCAAGAG
rJMFF009L08+ GCAGGCAAATACGCAAGAG
rJMFF007K12+ CTGCAGGCAAAAAGAAGGAAGAAGGAAATGTNCTTTTCAAGGCAGGCAAATACGCAAGAG
rJMFF013B04+ ACGCAAGAG
rJMFF009D18+ CAGGCAAATACGCAAGAG
____________________________________________________________
consensus CTGCAGGCAAAAAGAAGGAAGAAGGAAATGTACTTTTCAAGGCAGGCAAATACGCAAGAG
. : . : . : . : . : . :
rJMFF022P17+ CTTCGAAGAGATACGAGAAGGGAGCTAAGTTCATTGAATATGATACTTCCTTTAGTGAGG
rJMSF050H20+ CTTCGAAGAGATACGAGAAGGGAGCTAAGTTCATTGAATATGATACTTCCTTTAGTGAGG
rJMSF044G15+ CTTCGAAGAGATACGAGAAGGGAGCTAAGTTCATTGAATATGATACTTCCTTTAGTGAGG
rJMFF009L08+ CTTCGAAGAGATACGAGAAGGGAGCTAAGTTCATTGAATATGATACTTCCTTTAGTGAGG
rJMFF007K12+ CTTCGAAGAGATACGAGAAGGGAGCTAAGTTCATTGAATATGATACTTCCTTTAGTGAGG
rJMFF013B04+ CTTCGAAGAGATACGAGAAGGGAGCTAAGTTCATTGAATATGATACTTCCTTTAGTGAGG
rJMFF009D18+ CTTCGAAGAGATACGAGAAGGGAGCTAAGTTCATTGAATATGATACTTCCTTTAGTGAGG
____________________________________________________________
consensus CTTCGAAGAGATACGAGAAGGGAGCTAAGTTCATTGAATATGATACTTCCTTTAGTGAGG
. : . : . : . : . : . :
rJMFF022P17+ AGGAGAAGAAGCAATCTAAGGCCTTGAAGATCTCCTGCAACCTAAACAATGCAGCGTGCA
rJMSF050H20+ AGGAGAAGAAGCAATCTAAGGCCTTGAAGATCTCCTGCAACCTAAACAATGCAGCGTGCA
rJMSF044G15+ AGGAGAAGAAGCAATCTAAGGCCTTGAAGATCTCCTGCAACCTAAACAATGCAGCGTGCA
rJMFF009L08+ AGGAGAAGAAGCAATNTAAGGCCTTGAAGATCTCCTGCAACCTAAACAATGCAGCGTGCA
rJMFF007K12+ AGGAGAAGAAGCAATCTAAGGCCTTGAAGATCTCCTGCAACCTAAACAATGCAGCGTGCA
rJMFF013B04+ AGGAGAAGAAGCAATCTAAGGCCTTGAAGATCTCCTGCAACNTAAACAATGCAGCGTGCA
rJMFF009D18+ AGGAGAAGAAGCAATCTAAGGCCTTGAAGATCTCCTGCAACCTAAACAATGCAGCGTGCA
____________________________________________________________
consensus AGGAGAAGAAGCAATCTAAGGCCTTGAAGATCTCCTGCAACCTAAACAATGCAGCGTGCA
. : . : . : . : . : . :
rJMFF022P17+ AGTTGAAATTGAAAGATTACAAGGAGGCTGAGAAACTATGTACTAAGGTGCTTGAACTGG
rJMSF050H20+ AGTTGAAATTGAAAGATTACAAGGAGGCTGAGAAACTATGTACTAAGGTGCTTGAACTGG
rJMSF044G15+ AGTTGAAATTGAAAGATTACAAGGAGGCTGAGAAACTATGTACTAAGGTGCTTGAACTGG
rJMFF009L08+ AGTTGAAATTGAAAGATTACAAGGAGGCTGAGAAACTATGTACTAAGGTGCTTGAACTGG
JMSF049F12- GCTGAGAAACTATGTACTAAGGTGCTTGAACTGG
rJMSF049F12+ GCTGAGAAACTATGTACTAAGGTGCTTGAACTGG
rJMFF007K12+ AGTTGAAATTGAAAGATTACAAGGAGGCTGAGAAACTATGTACTAAGGTGCTTGAACTGG
rJMFF013B04+ AGTTGAAATTGAAAGATTACAAGGAGGCTGAGAAACTATGTACTAAGGTGCTTGAACTGG
rJMFF009D18+ AGTTGAAATTGAAAGATTACAAGGAGGCTGAGAAACTATGTACTAAGGTGCTTGAACTGG
____________________________________________________________
consensus AGTTGAAATTGAAAGATTACAAGGAGGCTGAGAAACTATGTACTAAGGTGCTTGAACTGG
. : . : . : . : . : . :
rJMFF022P17+ AGAGTACTAATGTTAAAGCACTCTACCGCAGAGCTCAAGCATATATACACTTTGCTGATT
rJMSF050H20+ AGAGTACTAATGTTAAAGCACTCTACCGCAGAGCTCAAGCATATATACACTTTGCTGATT
rJMSF044G15+ AGAGTACTAATGTTAAAGCACTCTACCGCAGAGCTCAAGCATATATACACTTTGCTGATT
rJMFF009L08+ AGAGTACTAATGTTAAAGCACTCTACCGCAGAGCTCAAGCATATATACACTTTGCTGATT
JMSF049F12- AGAGTACTAATGTTAAAGCACTCTACCGCAGAGCTCAAGCATATATACACTTTGCTGATT
rJMSF049F12+ AGAGTACTAATGTTAAAGCACTCTACCGCAGAGCTCAAGCATATATACACTTTGCTGATT
rJMFF007K12+ AGAGTACTAATGTTAAAGCACTCTACCGCAGAGCTCAAGCATATATACACTTTGCTGATT
rJMFF013B04+ AGAGTACTAATGTTAAAGCACTCTACCGCAGAGCTCAAGCATATATACACTTTGCTGATT
rJMFF051L20+ GCAGAGCTCAAGCATATATACACTTTGCTGATT
rJMFF009D18+ AGAGTACTAATGTTAAAGCACTCTACAGCAGAGCTCAAGCATATATACACTTTGCTGATT
____________________________________________________________
consensus AGAGTACTAATGTTAAAGCACTCTACCGCAGAGCTCAAGCATATATACACTTTGCTGATT
. : . : . : . : . : . :
rJMFF022P17+ TTGATCTGGCTGAGTTTGATATCAAGAAAGCTCTCGAAATTGATCCTGACAACAGGGAGG
rJMSF050H20+ TTGATCTGGCTGAGTTTGATATCAAGAAAGCTCTCGAAATTGATCCTGACAACAGGGAGG
rJMSF044G15+ TTGATCTGGCTGAGTTTGATATCAAGAAAGCTCTCGAAATTGATCCTGACAACAGGGAGG
rJMFF009L08+ TTGATCTGGCTGAGTTTGATATCAAGAAAGCTCTCGAAATTGATCCTGACAACAGGGAGG
JMSF049F12- TTGATCTGGCTGAGTTTGATATCAAGAAAGCTCTCGAAATTGATCCTGACAACAGGGAGG
rJMSF049F12+ TTGATCTGGCTGAGTTTGATATCAAGAAAGCTCTCGAAATTGATCCTGACAACAGGGAGG
rJMFF007K12+ TTGATCTGGCTGAGTTTGATATCAAGAAAGCTCTCGAAATTGATCCTGACAACAGGGAGG
rJMFF013B04+ TTGATCTGGCTGAGTTTGATATCAAGAAAGCTCTCGAAATTGATCCTGACAACAGGGAGG
rJMFF051L20+ TTGATCTGGCTGAGTTTGATATCAAGAAAGCTCTCGAAATTGATCCTGACAACAGGGAGG
rJMFF009D18+ TTGATCTGGCTGAGTTTGATATCAAGAAAGCTCTCGAAATTGATCCTGACAACAGGGAGG
____________________________________________________________
consensus TTGATCTGGCTGAGTTTGATATCAAGAAAGCTCTCGAAATTGATCCTGACAACAGGGAGG
. : . : . : . : . : . :
rJMFF022P17+ TGAAGCTTGAATATAAGGTTNTAAAGGAAAAGGTAAAAGAATACAATAAGAAGGATGCCA
rJMSF050H20+ TGAAGCTTGAATATAAGGTTCTAAAGGAAAAGGTAAAAGAATACAATAAGAAGGATGCCA
rJMSF044G15+ TGAAGCTTGAATATAAGGTTCTAAAGGAAAAGGTAAAAGAATACAATAAGAAGGATGCCA
rJMFF009L08+ TGAAGCTTGAATATAAGGTTCTAAAGGAAAAGGTAAAAGAATACAATAAGAAGGATGCCA
JMSF049F12- TGAAGCTTGAATATAAGGTTCTAAAGGAAAAGGTAAAAGAATACAATAAGAAGGATGCCA
rJMSF049F12+ TGAAGCTTGAATATAAGGTTCTAAAGGAAAAGGTAAAAGAATACAATAAGAAGGATGCCA
rJMFF007K12+ TGAAGCTTGAATATAAGGTTCTAAAGGAAAAGGTAAAAGAATACAATAAGAAGGATGCCA
rJMFF013B04+ TGAAGCTTGAATATAAGGTTCTAAAGGAAAAGGTAAAAGAATACAATAAGAAGGATGCCA
rJMFF051L20+ TGAAGCTTGAATATAAGGTTCTAAAGGAAAAGGTAAAAGAATACAATAAGAAGGATGCCA
rJMFF009D18+ TGAAGCTTGAATATAAGGTTCTAAAGGAAAAGGTAAAAGAATACAATAAGAAGGATGCCA
____________________________________________________________
consensus TGAAGCTTGAATATAAGGTTCTAAAGGAAAAGGTAAAAGAATACAATAAGAAGGATGCCA
. : . : . : . : . : . :
rJMFF022P17+ AATTCTATGGAAACATGTTTGCCAAGTTGAGCAAGCCGGAACCATTCAGTTCTAATAAAT
rJMSF050H20+ AATTCTATGGAAACATGTTTGCCAAGTTGAGCAAGCCGGAACCATTCAGTTCTAATAAAT
rJMSF044G15+ AATTCTATGGAAACATGTTTGTCAAGTTGAGCAAGCCGGAACCATTCAGTTCTAATAAAT
rJMFF009L08+ AATTCTATGGAAACATGTTTGCCAAGTTGAGCAAGCCGGAACCATTCAGTTCTAATAAAT
JMSF049F12- AATTCTATGGAAACATGTTTGCCAAGTTGAGCAAGCCGGAACCATTCAGTTCTAATAAAT
rJMSF049F12+ AATTCTATGGAAACATGTTTGCCAAGTTGAGCAAGCCGGAACCATTCAGTTCTAATAAAT
rJMFF007K12+ AATTCTATGGAAACATGTTTGCCAAGTTGAGCAAGCCGGAACCATTCAGTTCTAATAAAT
rJMFF013B04+ AATTCTATGGAAACATGTTTGCCAAGTTGAGCAAGCCGGAACCATTCAGTTCTAATAAAT
rJMFF051L20+ AATTCTATGGAAACATGTTTGCCAAGTTGAGCAAGCCGGAACCATTCAGTTCTAATAAAT
rJMFF009D18+ AATTCTATGGAAACATGTTTGCCAAGTTGAGCAAGCCGGAACCATTCAGTTCTAATAAAT
____________________________________________________________
consensus AATTCTATGGAAACATGTTTGCCAAGTTGAGCAAGCCGGAACCATTCAGTTCTAATAAAT
. : . : . : . : . : . :
rJMFF022P17+ CAGCTCCTCAGGAGGCAGAAGCCATTGACAGCAAGGCCTAAGCTTGCAGTGCAGAAAAGC
rJMSF050H20+ CAGCTCCTCAGGAGGCAGAAGCCATTGACAGCAAGGCCTAAGCTTGCAGTGCAGAAAAGC
rJMSF044G15+ CAGCTCCTCAGGAGGCAGAAGCCATTGACAGCAAGGCCTAAGCTTGCAGTGCAGAAAAGC
rJMFF009L08+ CAGCTCCTCAGGAGGCAGAAGCCATTGACAGCAAGGCCTAAGCTTGCAGTGCAGAAAAGC
JMSF049F12- CAGCTCCTCAGGAGGCAGAAGCCATTGACAGCAAGGCCTAAGCTTGCAGTGCAGAAAAGC
rJMSF049F12+ CAGCTCCTCAGGAGGCAGAAGCCATTGACAGCAAGGCCTAAGCTTGCAGTGCAGAAAAGC
rJMFF007K12+ CAGCTCCTCAGGAGGCAGAAGCCATTGACAGCAAGGCCTAAGCTTGCAGTGCAGAAAAGC
rJMFF013B04+ CAGCTCCTCAGGAGGCAGAAGCCATTGACAGCAAGGCCTAAGCTTGCAGTGCAGAAAAGC
rJMFF051L20+ CAGCTCCTCAGGAGGCAGAAGCCATTGACAGCAAGGCCTAAGCTTGCAGTGCAGAAAAGC
rJMFF009D18+ CAGCTCCTCAGGAGGCAGAAGCCATTGACAGCAAGGCCTAAGCTTGCAGTGCAGAAAAGC
____________________________________________________________
consensus CAGCTCCTCAGGAGGCAGAAGCCATTGACAGCAAGGCCTAAGCTTGCAGTGCAGAAAAGC
. : . : . : . : . : . :
rJMFF022P17+ AAGTCTGTTATTTGTTGAAGTTTCTTTGGGTTGCTTGGTCTGTGAAACTGGGGGATCTAT
rJMSF050H20+ AAGTCTGTTATTTGTTGAAGTTTCTTTGGGTTGCTTGGTCTGTGAAACTGGGGGATCTAT
rJMSF044G15+ AAGTCTGTTATTTGTTGAAGTTTCTTTGGGTTGCTTGGTCTGTGAAACTGGGGGATCTAT
rJMFF009L08+ AAGTCTGTTATTTGTTGAAGTTTCTTTGGGTTGCTTGGTCTGTGAAACTGGGGGATCTAT
JMSF049F12- AAGTCTGTTATTTGTTGAAGTTTCTTTGGGTTGCTTGGTCTGTGAAACTGGGGGATCTAT
rJMSF049F12+ AAGTCTGTTATTTGTTGAAGTTTCTTTGGGTTGCTTGGTCTGTGAAACTGGGGGATCTAT
rJMFF007K12+ AAGTCTGTTATTTGTTGAAGTTTCTTTGGGTTGCTTGGTCTGTGAAACTGGGGGATCTAT
rJMFF013B04+ AAGTCTGTTATTTGTTGAAGTTTCTTTGGGTTGCTTGGTCTGTGAAACTGGGGGATCTAT
rJMFF051L20+ AAGTCTGTTATTTGTTGAAGTTTCTTTGGGTTGCTTGGTCTGTGAAACTGGGGGATCTAT
rJMFF009D18+ AAGTCTGTTATTTGTTGAAGTTTCTTTGGGTTGCTTGGTCTGTGAAACTGGGGGATCTAT
____________________________________________________________
consensus AAGTCTGTTATTTGTTGAAGTTTCTTTGGGTTGCTTGGTCTGTGAAACTGGGGGATCTAT
. : . : . : . : . : . :
rJMFF022P17+ GTCTACAAATATGGTTACTAAATCTTGTTCCATGATTATTA-TTGAAACTAAATACTGAC
rJMSF050H20+ GTCTACAAATATGGTTACTAAATCTTGTTCCATGATTATTATTTGAAACTAAATACTGAC
rJMSF044G15+ GTCTACAAATATGGTTACTAAATCTTGTTCCATGATTATTATTTGAAACTAAATACTGAC
rJMFF009L08+ GTCTACAAATATGGTTACTAAATCTTGTTCCATGATTATTATTTGAAACTAAATACTGAC
JMSF049F12- GTCTACAAATATGGTTACTAAATCTTGTTCCATGATTATTATTTGAAACTAAATACTGAC
rJMSF049F12+ GTCTACAAATATGGTTACTAAATCTTGTTCCATGATTATTATTTGAAACTAAATACTGAC
rJMFF007K12+ GTCTACAAATATGGTTACTAAATCTTGTTCCATGATTATTATTTGAAACTAAATACTGAC
rJMFF013B04+ GTCTACAAATATGGTTACTAAATCTTGTTCCATGATTATTATTTGAAACTAAATACTGAC
rJMFF051L20+ GTCTACAAATATGGTTACTAAATCTTGTTCCATGATTATTATTTGAAACTAAATACTGAC
rJMFF009D18+ GTCTACAAATATGGTTACTAAATCTTGTTCCATGATTATTATTTGAAACTAAATACTGAC
____________________________________________________________
consensus GTCTACAAATATGGTTACTAAATCTTGTTCCATGATTATTATTTGAAACTAAATACTGAC
. : . : . : . : . : . :
rJMFF022P17+ CCAGAAAT
rJMSF050H20+ CCAGAAATTCCTA
rJMSF044G15+ CCAGAAATTCCTAGTATGCTTT
rJMFF009L08+ CCAGAAATTCCTAGTATGCTTTTCTTTATCTAATCCAAGGG
JMSF049F12- CCAGAAATTCCTAGTATGCTTTTCTTTATCTAATCCAAGGGTAGGAATATGTGTTCTCAA
rJMSF049F12+ CCAGAAATTCCTAGTATGCTTT
rJMFF007K12+ CCAGAAATTCCTAGTATGCTTTTCTTTATCTAATCCAAGGGTAGGAATATGTGTTCTCAA
rJMFF013B04+ CCAGAAATTCCTAGTATGCTTTTCTTTATCTAATCCAAGGGTAGGAATATGTGTTCTCAA
rJMFF051L20+ CCAGAAATTCCTAGTATGCTTTTCTTTATCTAATCCAAGGGTAGGAATATGTGTTCTCAA
rJMFF009D18+ CCA-AAATTCCTAGTATGCTTTTCTTTATCTAATCCAAGGGTAGGAATATGTGTTCTCAA
____________________________________________________________
consensus CCAGAAATTCCTAGTATGCTTTTCTTTATCTAATCCAAGGGTAGGAATATGTGTTCTCAA
. : . : . : . : . : . :
JMSF049F12- ATCTCA
rJMFF007K12+ ATCTCAATCCA
rJMFF013B04+ ATCTCAATCCA
rJMFF051L20+ ATCTCAATCCATAGACTTTTGCTCTTGCTCTTAAA
rJMFF009D18+ ATCTCAATCCATAGACTTTTGCTCTTGCTCTTAAATTACTTCAATCTCTTAGATAAATCT
____________________________________________________________
consensus ATCTCAATCCATAGACTTTTGCTCTTGCTCTTAAATTACTTCAATCTCTTAGATAAATCT