Contig 002523:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF025A23+                                                              TTCAAGCC
                      ____________________________________________________________
consensus                                                                 TTCAAGCC
 
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rJMSF025A23+          CGGTTAGAACACCATCGTTCCAGAGAGATCCCTCGAGTGCAGCTNTGAATGCAGCACGCT
rJMFF007G04+                           TTCCAGAGAGATCCCTCGAGTGCAGCTCTGAATGCAGCACGCT
                      ____________________________________________________________
consensus             CGGTTAGAACACCATCGTTCCAGAGAGATCCCTCGAGTGCAGCTCTGAATGCAGCACGCT
 
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rJMSF025A23+          NTGCAGCATTTGCAAAACGAAGCCAGAGCTTCATTGACCGCAGTGCCCCGTGCCACCACC
rJMFF007G04+          CTGCAGCATTTGCAAAACGAAGCCAGAGCTTCATTGACCGCAGTGCCCCGTGCCACCACC
                      ____________________________________________________________
consensus             CTGCAGCATTTGCAAAACGAAGCCAGAGCTTCATTGACCGCAGTGCCCCGTGCCACCACC
 
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rJMSF025A23+          ATGGTATGATCTCTTCGCCAATGTCTCCTGTAACCGCAATGCCTTCAACCCTTTCCGGGT
rJMFF007G04+          ATGGTATGATCTCTTCGCCAATGTCTCCTGTAACCGCAATGCCTTCAACCCTTTCCGGGT
                      ____________________________________________________________
consensus             ATGGTATGATCTCTTCGCCAATGTCTCCTGTAACCGCAATGCCTTCAACCCTTTCCGGGT
 
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rJMSF025A23+          GGGGCTCCCCCGATGGCAAATTGGATTGGGGTATGCAAAAGGACGAGCTCAGCAAGTTGA
rJMFF007G04+          GGGGCTCCCCCGATGGCAAATTGGATTGGGGTATGCAAAAGGACGAGCTCAGCAAGTTGA
                      ____________________________________________________________
consensus             GGGGCTCCCCCGATGGCAAATTGGATTGGGGTATGCAAAAGGACGAGCTCAGCAAGTTGA
 
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rJMSF025A23+          GAAAATCCGCTTCTTTTGGCATCCGAAGCAGCAGTGGCACCACTTACGCCACAACTGGAA
rJMFF007G04+          GAAAATCCGCTTCTTTTGGCATCCGAAGCAGCAGTGGCACCACTTACGCCACAACTGGAA
                      ____________________________________________________________
consensus             GAAAATCCGCTTCTTTTGGCATCCGAAGCAGCAGTGGCACCACTTACGCCACAACTGGAA
 
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rJMSF025A23+          CTCCATTCCCAACGACGCCTGCTGATGAGCCCGACGTTTCGTGGGTTCAGTCTCTAGTGA
rJMFF007G04+          CTCCATTCCCAACGACGCCTGCTGATGAGCCCGACGTTTCGTGGGTTCAGTCTCTAGTGA
                      ____________________________________________________________
consensus             CTCCATTCCCAACGACGCCTGCTGATGAGCCCGACGTTTCGTGGGTTCAGTCTCTAGTGA
 
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rJMSF025A23+          GGGACACCCCCGCTGTAAGTTCCCGCCAATTCATCGATTCAGAGGATCCTCAGTATTATC
rJMFF007G04+          GGGACACCCCCGCTGTAAGTTCCCGCCAATTCATCGATTCAGAGGATCCTCAGTATTATC
                      ____________________________________________________________
consensus             GGGACACCCCCGCTGTAAGTTCCCGCCAATTCATCGATTCAGAGGATCCTCAGTATTATC
 
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rJMSF025A23+          AAGGAAGTCCCGAGATGCATCCCACCTGGGGAGACCAGCAGATATACATGGAACAAGAAC
rJMFF007G04+          AAGGAAGTCCCGAGATGCATCCCACCTGNGGAGACCAGCAGATATACATGGAACAAGAAC
                      ____________________________________________________________
consensus             AAGGAAGTCCCGAGATGCATCCCACCTGGGGAGACCAGCAGATATACATGGAACAAGAAC
 
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rJMSF025A23+          AGATCATGGCATAAATGAGATACATTAACTCTGCATATTTTTTTTGGGGTGTAATCCTTA
rJMFF007G04+          AGATCATGGCATAAATGAGATACATTAACTCTGCATATTTTTTTTGGGGTGTAATCCTTA
                      ____________________________________________________________
consensus             AGATCATGGCATAAATGAGATACATTAACTCTGCATATTTTTTTTGGGGTGTAATCCTTA
 
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rJMSF025A23+          ACAATTTCTTTTACCATTTTTTGAATTTTTTCCTTTTTTTGCTTTAGATTCACAGCTTAG
rJMFF007G04+          ACAATTTCTTTTACCATTTTTTGAATTTTTTCCTTTTTTTGCTTTAGATTCACAGCTTAG
                      ____________________________________________________________
consensus             ACAATTTCTTTTACCATTTTTTGAATTTTTTCCTTTTTTTGCTTTAGATTCACAGCTTAG
 
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rJMSF025A23+          TTGGTGAATGAATACAATCAAAGAAAGGATCTGAATAATGAAGCTGGGCCTGGTGAAACC
rJMFF007G04+          TTGGTGAATGAATACAATCAAAGAAAGGATCTGAATAATGAAGCTGGGCCTGGTGAAACC
                      ____________________________________________________________
consensus             TTGGTGAATGAATACAATCAAAGAAAGGATCTGAATAATGAAGCTGGGCCTGGTGAAACC
 
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rJMSF025A23+          TTCCTGCTCATCTTTTCAAGGTTCTTACATATATTTCTTCAAAGCTGGCTTATGTTGTAA
rJMFF007G04+          TTCCTGCTCATCTTTTCAAGGTTCTTACATATATTTCTTCAAAGCTGGCTTATGTTGTAA
                      ____________________________________________________________
consensus             TTCCTGCTCATCTTTTCAAGGTTCTTACATATATTTCTTCAAAGCTGGCTTATGTTGTAA
 
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rJMSF025A23+          TACCATATATCATACTTTNGNAGACATCTT                              
rJMFF007G04+          TACCATATATCATACTTTTGTAGACATCTTTGAATAATAATTGTATGAGATGTTGGATTT
                      ____________________________________________________________
consensus             TACCATATATCATACTTTTGTAGACATCTTTGAATAATAATTGTATGAGATGTTGGATTT