Contig 002517:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006F20Sequence520005897 (2)ref|XP_004287088.1|2e-44PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Fragaria vesca subsp693002517 (2)gb|AIL29215.1|3e-94aldehyde dehydrogenase [Camellia oleifera]
JMFF026E14Sequence590005897 (2)ref|XP_010688154.1|1e-76PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Beta vulgaris subsp.809002517 (2)ref|XP_008242609.1|2e-146PREDICTED: aldehyde dehydrogenase family 2 member C4 [Prunus mume]

Alignment

This contig is upended


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rJMFF026E14+                                                AGTTAGTTTTACAGGATCACCA
                      ____________________________________________________________
consensus                                                   AGTTAGTTTTACAGGATCACCA
 
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rJMFF026E14+          GAAGTTGGGAAGTTAGTAATGAAGGCTGCAGCAGACAGCAATNTAAAACAAGTGACACTA
                      ____________________________________________________________
consensus             GAAGTTGGGAAGTTAGTAATGAAGGCTGCAGCAGACAGCAATNTAAAACAAGTGACACTA
 
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rJMFF026E14+          GAGCTNGGAGGAAAGAACCCTCTCATAATATTTGATGATGCCGACATTGAAATGGCCACA
                      ____________________________________________________________
consensus             GAGCTNGGAGGAAAGAACCCTCTCATAATATTTGATGATGCCGACATTGAAATGGCCACA
 
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rJMFF026E14+          GGACTTGCTGTATTGGGCAGCCTTTATAACAAGGGTGAGGTTTGTGTTGCAAGCTCTCGT
                      ____________________________________________________________
consensus             GGACTTGCTGTATTGGGCAGCCTTTATAACAAGGGTGAGGTTTGTGTTGCAAGCTCTCGT
 
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rJMFF026E14+          ATTTTCGTGCAAGAAGGAATCTATGATGAATTTGCAAAGAAACTAGTAGAGAAGGTGAAA
                      ____________________________________________________________
consensus             ATTTTCGTGCAAGAAGGAATCTATGATGAATTTGCAAAGAAACTAGTAGAGAAGGTGAAA
 
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rJMFF026E14+          ATGACGGTCGTTGGTGATCCTTTTCATCCTTCAACCCATCAAGGACCCCAGGTGGACAAA
rJMFF006F20+                                     CCTTCAACCCATCAAGGACCCCAGGTGGACAAA
                      ____________________________________________________________
consensus             ATGACGGTCGTTGGTGATCCTTTTCATCCTTCAACCCATCAAGGACCCCAGGTGGACAAA
 
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rJMFF026E14+          AATCCATATGAGAAAATATTGTCATATATCGAGCATGGCAAGAGAGAAGGAGCCACATTG
rJMFF006F20+          AATCAATATGAGAAAATATTGTCATATATCGAGCATGGCAAGAGAGAAGGAGCCACATTG
                      ____________________________________________________________
consensus             AATCCATATGAGAAAATATTGTCATATATCGAGCATGGCAAGAGAGAAGGAGCCACATTG
 
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rJMFF026E14+          TTAACAGGAGGCAAGCCTTGTGGTGAGAAGGGATATTACATTGAGCCCACCATCTTTTCA
rJMFF006F20+          TTAACAGGAGGCAAGCCTTGTGGTGAGAAGGGATATTACATTGAGCCCACCATCTTTTCA
                      ____________________________________________________________
consensus             TTAACAGGAGGCAAGCCTTGTGGTGAGAAGGGATATTACATTGAGCCCACCATCTTTTCA
 
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rJMFF026E14+          GATGTAAAGGATTCTATGCTGATTGCCAAGGACGAAATATTTGGTCCCGTCATCTCATTG
rJMFF006F20+          GATGTAAAGGATTCTATGCTGATTGCCAAGGACGAAATATTTGGTCCCGTCATCTCATTG
                      ____________________________________________________________
consensus             GATGTAAAGGATTCTATGCTGATTGCCAAGGACGAAATATTTGGTCCCGTCATCTCATTG
 
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rJMFF026E14+          CTCAAATTCAAGAGTGTTGAGGAGGCCATAGGGAGAGCCAATGCTACAAAATATGGACTG
rJMFF006F20+          CTCAAATTCAAGAGTGTTGAGGAGGCCATAGGGAGAGCCAATGCTACAAAATATGGACTG
                      ____________________________________________________________
consensus             CTCAAATTCAAGAGTGTTGAGGAGGCCATAGGGAGAGCCAATGCTACAAAATATGGACTG
 
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rJMFF026E14+          GCGGCCGGCATTGTGACCAAGGATTTCAACATTGCCAACACGGTTTCGAGGTCGATTCGA
rJMFF006F20+          GCGGCCGGCATTGTGACCAAGGATTTCAACATTGCCAACACGGTTTCGAGGTCGATTCGA
                      ____________________________________________________________
consensus             GCGGCCGGCATTGTGACCAAGGATTTCAACATTGCCAACACGGTTTCGAGGTCGATTCGA
 
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rJMFF026E14+          GCAGGCGTTGTTTGGATAAACTGTTATCTGGAGTTTGATTACGATATTCCTTATGGGGGT
rJMFF006F20+          GCAGGCGTTGTTTGGATAAACTGTTATCTGGAGTTTGATTACGATATTCCTTATGGGGGT
                      ____________________________________________________________
consensus             GCAGGCGTTGTTTGGATAAACTGTTATCTGGAGTTTGATTACGATATTCCTTATGGGGGT
 
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rJMFF026E14+          TACAAGATGAGTGGGTTTGGGAGAGATTCAGGAATGGAGGCACTTGATCAGTATCTTCAA
rJMFF006F20+          TACAAGATGAGTGGGTTTGGGAGAGATTCAGGAATGGAGGCACTTGATCAGTATCTTCAA
                      ____________________________________________________________
consensus             TACAAGATGAGTGGGTTTGGGAGAGATTCAGGAATGGAGGCACTTGATCAGTATCTTCAA
 
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rJMFF026E14+          ACCAAATCTGTTGTAACTCCCTTGTACAATTCCCCTTGGCTATGAGTCCTCACCTCCCAA
rJMFF006F20+          ACCAAATCTGTTGTAACTCCCTTGTACAATTCCCCTTGGCTATGAGTCCTCACCTCCCAA
                      ____________________________________________________________
consensus             ACCAAATCTGTTGTAACTCCCTTGTACAATTCCCCTTGGCTATGAGTCCTCACCTCCCAA
 
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rJMFF026E14+          ACATATA                                                     
rJMFF006F20+          ACATATATCAATCCTTGAATAAAATCTCGTAGTATTACTAATTGAATATCGCGTATTGTG
                      ____________________________________________________________
consensus             ACATATATCAATCCTTGAATAAAATCTCGTAGTATTACTAATTGAATATCGCGTATTGTG
 
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rJMFF006F20+          CTATTAAATAAATGTGTAACAGAAAATATAGTCAAGGGAGAATGATGAAAATGGAAAGAG
                      ____________________________________________________________
consensus             CTATTAAATAAATGTGTAACAGAAAATATAGTCAAGGGAGAATGATGAAAATGGAAAGAG
 
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rJMFF006F20+          TTTGTTTAAAATTAAGTGCGATGTATAAGTTATCATTATTACAATTGATAATGCCAAACT
                      ____________________________________________________________
consensus             TTTGTTTAAAATTAAGTGCGATGTATAAGTTATCATTATTACAATTGATAATGCCAAACT