Contig 002516:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006E23Sequence564017312emb|CBI28692.3|6e-13unnamed protein product [Vitis vinifera]781002516 (2)
JMSF043N24Sequence764002416 (2)683002516 (2)

Alignment

This contig is upended


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rJMFF006E23+                                                                     C
                      ____________________________________________________________
consensus                                                                        C
 
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rJMSF043N24+          TCCCGCACTTAACTTATCTTCTGTTGCACAGAAGCCTTCAATCCTCCATGCTCTCCCTGA
rJMFF006E23+          TCCCGCACTTAACTTATCTTCTGTTGCACAGAAGCCTTCAATCCTCCATGCTCTCCCTGA
                      ____________________________________________________________
consensus             TCCCGCACTTAACTTATCTTCTGTTGCACAGAAGCCTTCAATCCTCCATGCTCTCCCTGA
 
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rJMSF043N24+          TATGTCCCAGCTATCAGTTTTCATCTGCCATCCAAATGGCACTGCTTAACAAGTTTCAAA
rJMFF006E23+          TATGTCCCAGCTATCAGTTTTCATCTGCCATCCAAATGGCACTGCTTAACAAGTTTCAAA
                      ____________________________________________________________
consensus             TATGTCCCAGCTATCAGTTTTCATCTGCCATCCAAATGGCACTGCTTAACAAGTTTCAAA
 
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rJMSF043N24+          ATTCTGGAGGAAAGAATGTGGCCAGCCACTCTGACCAACATCAGCAATAGTAAAAAAGGA
rJMFF006E23+          ATTCTGGAGGAAAGAATGTGGCCAGCCACTCTGACCAACATCAGCAATAGTAAAAAAGGA
                      ____________________________________________________________
consensus             ATTCTGGAGGAAAGAATGTGGCCAGCCACTCTGACCAACATCAGCAATAGTAAAAAAGGA
 
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rJMSF043N24+          ACCCAATCTCCATCCTGTTATGCATGCTATGATGCCCAGAAAGTGGCACAGTTTAAGCTA
rJMFF006E23+          ACCCAATCTCCATCCTGTTATGCATGCTATGATGCCCAGAAAGTGGCACAGTTTAAGCTA
                      ____________________________________________________________
consensus             ACCCAATCTCCATCCTGTTATGCATGCTATGATGCCCAGAAAGTGGCACAGTTTAAGCTA
 
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rJMSF043N24+          CCTACCTACGAGGTGCAGCTCAAGTTAACGTTCCATTTCCCAACAAGAAACCTCATTTCC
rJMFF006E23+          CCTACCTACGAGGTGCAGCTCAAGTTAACGTTCCATTTCCCAACAAGAAACCTCATTTCC
                      ____________________________________________________________
consensus             CCTACCTACGAGGTGCAGCTCAAGTTAACGTTCCATTTCCCAACAAGAAACCTCATTTCC
 
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rJMSF043N24+          TCTCCAGTAGCCAGCCAACAAAGATGGAGACCCTTGTGGGAGTAATGCACTGAAAACTCT
rJMFF006E23+          TCTCCAGTAGCCAGCCAACAAAGATGGAGACCCTTGTGGGAGTAATGCACTGAAAACTCT
                      ____________________________________________________________
consensus             TCTCCAGTAGCCAGCCAACAAAGATGGAGACCCTTGTGGGAGTAATGCACTGAAAACTCT
 
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rJMSF043N24+          GTTGATAAAGCATGGAAATTCGATCTTCAAGCTTAGCTAGCTTCCCCCTCCATTGTTGTT
rJMFF006E23+          GTTGATAAAGCATGGAAATTCGATCTTCAAGCTTAGCTAGCTTCCCCCTCCATTGTTGTT
                      ____________________________________________________________
consensus             GTTGATAAAGCATGGAAATTCGATCTTCAAGCTTAGCTAGCTTCCCCCTCCATTGTTGTT
 
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rJMSF043N24+          CTTCTGGAAGTTTACCAGGGTGGGTTCAGGGTTCTACTGCAATGCAAGGAATGGTAAATG
rJMFF006E23+          CTTCTGGAAGTTTACCAGGGTGGGTTCAGGGTTCTACTGCAATGCAAGGAATGGTAAATG
                      ____________________________________________________________
consensus             CTTCTGGAAGTTTACCAGGGTGGGTTCAGGGTTCTACTGCAATGCAAGGAATGGTAAATG
 
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rJMSF043N24+          AAGCAGGCAGGCAGGCAGCTTCGATAGTGACAAAGGATGATAGGATGGTGGGGAGGTGAG
rJMFF006E23+          AAGCAGGCAGGCAGGCAGCTTCGATAGTGACAAAGGATGATAGGATGGTGGGGAGGTGAG
                      ____________________________________________________________
consensus             AAGCAGGCAGGCAGGCAGCTTCGATAGTGACAAAGGATGATAGGATGGTGGGGAGGTGAG
 
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rJMSF043N24+          AGGCCATTGGCGCAAGTAGTGTTAAAATGAAGGTTAGTCTATGGAGGAGGCAATGGGATG
rJMFF006E23+          AGGCCATTGGCGCAAGTAGTGTTAAAATGAAGGTTAGTCTATGGAGGAGGCAATGGGATG
                      ____________________________________________________________
consensus             AGGCCATTGGCGCAAGTAGTGTTAAAATGAAGGTTAGTCTATGGAGGAGGCAATGGGATG
 
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rJMSF043N24+          TGTGTATATCTATACATATTTGTTACTCCTCTGTTGTATATATCATAGTAGTAGTCTAGA
rJMFF006E23+          TGTGTATATCTATACATATTTGTTACTCCTCTGTTGTATATATCATAGTAGTAGTCTAGA
                      ____________________________________________________________
consensus             TGTGTATATCTATACATATTTGTTACTCCTCTGTTGTATATATCATAGTAGTAGTCTAGA
 
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rJMSF043N24+          AGTCCCTTCCTGTTTT                                            
rJMFF006E23+          AGTCCCTTCCTGTTTTTCCAAACCCTGGTTCTAATCAATGGAACAAAACCAGACAATCAG
                      ____________________________________________________________
consensus             AGTCCCTTCCTGTTTTTCCAAACCCTGGTTCTAATCAATGGAACAAAACCAGACAATCAG
 
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rJMFF006E23+          ACAGTTCCATATTGTCATCATCCACTCTAAAAAACAACTTAATAATGTAATTTACACATA
                      ____________________________________________________________
consensus             ACAGTTCCATATTGTCATCATCCACTCTAAAAAACAACTTAATAATGTAATTTACACATA