Contig 002514:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006C18Sequence491012108 (4)ref|XP_009615358.1|2e-09PREDICTED: nephrocystin-3 [Nicotiana tomentosiformis]779002514 (4)ref|XP_011070356.1|5e-94PREDICTED: nephrocystin-3 [Sesamum indicum]
JMFF029K18Sequence247012108 (4)743002514 (4)ref|XP_011070356.1|1e-112PREDICTED: nephrocystin-3 [Sesamum indicum]
JMSF013M23Sequence254012108 (4)752002514 (4)ref|XP_011070356.1|2e-122PREDICTED: nephrocystin-3 [Sesamum indicum]
JMSF038G01Sequence611012108 (4)ref|XP_009615358.1|4e-33PREDICTED: nephrocystin-3 [Nicotiana tomentosiformis]874002514 (4)ref|XP_011070356.1|7e-138PREDICTED: nephrocystin-3 [Sesamum indicum]

Alignment

This contig is upended


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rJMSF038G01+           CTGTGCCTGGAACAACTTCAGAAGAGATTGCAAGTGGAATGACAGAAATTTCTGCCATA
                      ____________________________________________________________
consensus              CTGTGCCTGGAACAACTTCAGAAGAGATTGCAAGTGGAATGACAGAAATTTCTGCCATA
 
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rJMSF038G01+          TATGAATTGTTTAATGAACCCGAGGAAGCACTAAAGCTCTTGGTGAAGGCTCTGAAGTTG
                      ____________________________________________________________
consensus             TATGAATTGTTTAATGAACCCGAGGAAGCACTAAAGCTCTTGGTGAAGGCTCTGAAGTTG
 
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rJMSF038G01+          TTGGAGGATAAACCAGGGCAGCAAAGCACAATTGCTGGGATAGAGGCACGGATGGGTGTC
rJMSF013M23+             GAGGATAAACCAGGGCAGCAAAGCACAATTGCTGGGATAGAGGCACGGATGGGTGTC
rJMFF029K18+                                               GGATAGAGGCACGGATGGGTGTC
rJMFF006C18+             GAGGATAAACCAGGGCAGCAAAGCACAATTGCTGGGATAGAGGCACGGATGGGTGTC
                      ____________________________________________________________
consensus             TTGGAGGATAAACCAGGGCAGCAAAGCACAATTGCTGGGATAGAGGCACGGATGGGTGTC
 
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rJMSF038G01+          ATGTTTTATATGGTTGGAAGGTATGATGAAGCACGAAGCTCCTTTGAGAGTGCCGTGGCA
rJMSF013M23+          ATGTTTTATATGGTTGGAAGGTATGATGAAGCACGAAGCTCCTTTGAGAGTGCCGTGGCA
rJMFF029K18+          ATGTTTTATATGGTTGGAAGGTATGATGAAGCACGAAGCTCCTTTGAGAGTGCCGTGGCA
rJMFF006C18+          ATGTTTTATATGGTTGGAAGGTATGATGAAGCACGAAGCTCCTTTGAGAGTGCCGTGGCA
                      ____________________________________________________________
consensus             ATGTTTTATATGGTTGGAAGGTATGATGAAGCACGAAGCTCCTTTGAGAGTGCCGTGGCA
 
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rJMSF038G01+          AAACTTAGAGCCAGTGGAGAGAGGAAATCAGCTTTCTTTGGAGTGGTGTTGAACCAAATG
rJMSF013M23+          AAACTTAGAGCCAGTGGAGAGAGGAAATCAGCTTTCTTTGGAGTGGTGTTGAACCAAATG
rJMFF029K18+          AAACTTAGAGCCAGTGGAGAGAGGAAATCAGCTTTCTTTGGAGTGGTGTTGAACCAAATG
rJMFF006C18+          AAACTTAGAGCCAGTGGAGAGAGGAAATCAGCTTTCTTTGGAGTGGTGTTGAACCAAATG
                      ____________________________________________________________
consensus             AAACTTAGAGCCAGTGGAGAGAGGAAATCAGCTTTCTTTGGAGTGGTGTTGAACCAAATG
 
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rJMSF038G01+          GGGTTGTCATGCGTACAGTTGTTCAAAATAGACGAGGCTGCTGAATTGTTTGAAGAAGCA
rJMSF013M23+          GGGTTGTCATGCGTACAGTTGTTCAAAATAGACGAGGCTGCTGAATTGTTTGAAGAAGCA
rJMFF029K18+          GGGTTGTCATGCGTACAGTTGTTCAAAATAGACGAGGCTGCTGAATTGTTTGAAGAAGCA
rJMFF006C18+          GGGTTGTCATGCGTACAGTTGTTCAAAATAGACGAGGCTGCTGAATTGTTTGAAGAAGCA
                      ____________________________________________________________
consensus             GGGTTGTCATGCGTACAGTTGTTCAAAATAGACGAGGCTGCTGAATTGTTTGAAGAAGCA
 
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rJMSF038G01+          AGAGAAATCTTAGAACATGAGTGTGGCCCTTGCCATCAAGATACACTTGGTGTATACAGT
rJMSF013M23+          AGAGAAATCTTAGAACATGAGTGTGGCCCTTGCCATCAAGATACACTTGGTGTATACAGT
rJMFF029K18+          AGAGAAATCTTAGAACATGAGTGTGGCCCTTGCCATCAAGATACACTTGGTGTATACAGT
rJMFF006C18+          AGAGAAATCTTAGAACATGAGTGTGGCCCTTGCCATCAAGATACACTTGGTGTATACAGT
                      ____________________________________________________________
consensus             AGAGAAATCTTAGAACATGAGTGTGGCCCTTGCCATCAAGATACACTTGGTGTATACAGT
 
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rJMSF038G01+          AATCTCGCTGCAACTTATGATGCAATGGGAAGAGTTGAAGATGCAATTGAGATTTTGGAG
rJMSF013M23+          AATCTCGCTGCAACTTATGATGCAATGGGAAGAGTTGAAGATGCAATTGAGATTTTGGAG
rJMFF029K18+          AATCTCGCTGCAACTTATGATGCAATGGGAAGAGTTGAAGATGCAATTGAGATTTTGGAG
rJMFF006C18+          AATCTCGCTGCAACTTATGATGCAATGGGAAGAGTTGAAGATGCAATTGAGATTTTGGAG
                      ____________________________________________________________
consensus             AATCTCGCTGCAACTTATGATGCAATGGGAAGAGTTGAAGATGCAATTGAGATTTTGGAG
 
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rJMSF038G01+          TACGTTCTTAAATTGCGAGAGGAGAAGCTTGGAACAGCAAATCCGGACTTTGATGATGAG
rJMSF013M23+          TACGTTCTTAAATTGCGAGAGGAGAAGCTTGGAACAGCAAATCCGGACTTTGATGATGAG
rJMFF029K18+          TACGTTCTTAAATTGCGAGAGGAGAAGCTTGGAACAGCAAATCCGGACTTTGATGATGAG
rJMFF006C18+          TACGTTCTTAAATTGCGAGAGGAGAAGCTTGGAACA-CAAATCCGGACTTTGATGATGAG
                      ____________________________________________________________
consensus             TACGTTCTTAAATTGCGAGAGGAGAAGCTTGGAACAGCAAATCCGGACTTTGATGATGAG
 
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rJMSF038G01+          AAGAAAAGGCTGGCTGAGCTCCTAAAAGAAGCAGGCAAGTCAAGAAACAAAAAGGCAAAA
rJMSF013M23+          AAGAAAAGGCTGGCTGAGCTCCTAAAAGAAGCAGGCAAGTCAAGAAACAAAAAGGCAAAA
rJMFF029K18+          AAGAAAAGGCTGGCTGAGCTCCTAAAAGAAGCAGGCAAGTCAAGAAACAAAAAGGCAAAA
rJMFF006C18+          AAGAAAAGGCTGGCTGAGCTCCTAAAAGAAGCAGGCAAGTCAAGAAACAAAAAGGCAAAA
                      ____________________________________________________________
consensus             AAGAAAAGGCTGGCTGAGCTCCTAAAAGAAGCAGGCAAGTCAAGAAACAAAAAGGCAAAA
 
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rJMSF038G01+          TCACTGGAAAACCTCATCGACCCAAATTCGAAGAGGACAAAGAAAGAGTCATCAAAGAAG
rJMSF013M23+          TCACTGGAAAACCTCATCGACCCAAATTCGAAGAGGACAAAGAAAGAGTCATCAAAGAAG
rJMFF029K18+          TCACTGGAAAACCTCATCGACCCAAATTCGAAGAGGACAAAGAAAGAGTCATCAAAGAAG
rJMFF006C18+          TCACTGGAAAACCTCATCGACCCAAATTCGAAGAGGACAAAGAAAGAGTCATCAAAGAAG
                      ____________________________________________________________
consensus             TCACTGGAAAACCTCATCGACCCAAATTCGAAGAGGACAAAGAAAGAGTCATCAAAGAAG
 
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rJMSF038G01+          TGGTCAGCCTTCGGCTTTAGAAGTTAAGCCAATTTGTCATGGGTTATCCACTACCATTAG
rJMSF013M23+          TGGTCAGCCTTCGGCTTTAGAAGTTAAGCCAATTTGTCATGGGTTATCCACTACCATTAG
rJMFF029K18+          TGGTCAGCCTTCGGCTTTAGAAGTTAAGCCAATTTGTCATGGGTTATCCACTACCATTAG
rJMFF006C18+          TGGTCAGCCTTCGGCTTTAGAAGTTAAGCCAATTTGTCATGGGTTATCCACTACCATTAG
                      ____________________________________________________________
consensus             TGGTCAGCCTTCGGCTTTAGAAGTTAAGCCAATTTGTCATGGGTTATCCACTACCATTAG
 
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rJMSF038G01+          CTTCAACAGAAGCATATTCTGTAGCCTAGAAGATGGTGTATAGTTAATCCGTAATCTGGT
rJMSF013M23+          CTTCAACAGAAGCATATTCTGTAGCCTAGAAGATGGTGTATAGTTAATCCGTAATCTGGT
rJMFF029K18+          CTTCAACAGAAGCATATTCTGTAGCCTAGAAGATGGTGTATAGTTAATCCGTAATCTGGT
rJMFF006C18+          CTTCAACAGAAGCATATTCTGTAGCCTAGAAGATGGTGTATAGTTAATCCGTAATCTGGT
                      ____________________________________________________________
consensus             CTTCAACAGAAGCATATTCTGTAGCCTAGAAGATGGTGTATAGTTAATCCGTAATCTGGT
 
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rJMSF038G01+          GGTGAGTCTTCTGCCTGTTTCTTGGCTGGTTTGGGTTGGCATTGAATTTGATTTTGATTT
rJMSF013M23+          GGTGAGTCTTCTGCCTGTTTCTTGGCTGGTTTGGGTTGGCATTGAATTTGATTTTGATTT
rJMFF029K18+          GGTGAGTCTTCTGCCTGTTTCTTGGCTGGTTTGGGTTGGCATTGAATTTGATTNTGATTT
rJMFF006C18+          GGTGAGTCTTCTGCCTGTTTCTTGGCTGGTTTGGGTTGGCATTGAATTTGATTTTGATTT
                      ____________________________________________________________
consensus             GGTGAGTCTTCTGCCTGTTTCTTGGCTGGTTTGGGTTGGCATTGAATTTGATTTTGATTT
 
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rJMSF038G01+          TGATTAATTGTTTAATTGTTATTTGTTTGAGATCT                         
rJMSF013M23+          TGATTAATTGTTTAATTGTTATTTGTTTGAGATCT                         
rJMFF029K18+          TGATTAATTGTTTAATTGTTATTTGTTNGAGATCTGAAAGATGCTCAGAGAAAAGACCGC
rJMFF006C18+          TGATTAATTGTTTAATTGTTATTTGTTTGAGATCTGAAAGATGCTCAGAGAAAAGACCGC
                      ____________________________________________________________
consensus             TGATTAATTGTTTAATTGTTATTTGTTTGAGATCTGAAAGATGCTCAGAGAAAAGACCGC