Contig 002500:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002D07Sequence175002500 (4)545002500 (4)gb|EYU37259.1|5e-08hypothetical protein MIMGU_mgv1a017236mg [Erythranthe guttata]
JMFF006E15Sequence547002500 (4)gb|EYU37259.1|4e-08hypothetical protein MIMGU_mgv1a017236mg [Erythranthe guttata]
JMFS016F07Sequence461002500 (4)gb|EYU37259.1|1e-09hypothetical protein MIMGU_mgv1a017236mg [Erythranthe guttata]

Alignment

This contig is upended


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JMFS016F07+                                                    GGGXXXXXXXXXXXXXXXX
                      ____________________________________________________________
consensus                                                      GGGNNNNNNNNNNNNNNNN
 
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JMFS016F07+           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
                      ____________________________________________________________
consensus             NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
 
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JMFS016F07+           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAAATATATATATATATATATAATTTCTT
                      ____________________________________________________________
consensus             NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAATATATATATATATATATAATTTCTT
 
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JMFS016F07+           TGTTTTTTTATTCAATAAAAAACCAAAGGAAAAATTGTAAAAATTTTGAGAAATACATAC
JMFF006E15+                         ATAAAAAACCAAAGGAAAAATTGTAAAAATTTTGAGAAATACATAC
rJMFF002D07-                        ATAAAAAACCAAAGGAAAAATTGTAAAAATTTTGAGAAATACATAC
                      ____________________________________________________________
consensus             TGTTTTTTTATTCAATAAAAAACCAAAGGAAAAATTGTAAAAATTTTGAGAAATACATAC
 
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JMFS016F07+           ATACATTAAAGATGATAAATTCATCATAATTTAGATTGAATCGATCGCGCATATATGCAT
JMFF006E15+           ATACATTAAAGATGATAAATTCATCATAATTTAGATTGAATCGATCGCGCATATATGCAT
rJMFF002D07-          ATACATTAAAGATGATAAATTCATCATAATTTAGATTGAATCGATCGCGCATATATGCAT
                      ____________________________________________________________
consensus             ATACATTAAAGATGATAAATTCATCATAATTTAGATTGAATCGATCGCGCATATATGCAT
 
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JMFS016F07+           CCAAGACAAATATTTGATGAGTAATATAATCGATCAGAAGCAATTTAGGCTTGAACACGA
JMFF006E15+           CCAAGACAAATATTTGATGAGTAATATAATCGATCAGAAGCAATTTAGGCTTGAACACGA
rJMFF002D07-          CCAAGACAAATATTTGATGAGTAATATAATCGATCAGAAGCAATTTAGGCTTGAACACGA
                      ____________________________________________________________
consensus             CCAAGACAAATATTTGATGAGTAATATAATCGATCAGAAGCAATTTAGGCTTGAACACGA
 
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JMFS016F07+           ACGCTTGAAGCTTCGAACCCCCTTGTTGAAGGAAACCTTCATTTTGGCTTCAATCGAATA
JMFF006E15+           ACGCTTGAAGCTTCGAACCCCCTTGTTGAAGGAAACCTTCATTTTGGCTTCAATCGAATA
rJMFF002D07-          ACGCTTGAAGCTTCGAACCCCCTTGTTGAAGGAAACCTTCATTTTGGCTTCAATCGAATA
                      ____________________________________________________________
consensus             ACGCTTGAAGCTTCGAACCCCCTTGTTGAAGGAAACCTTCATTTTGGCTTCAATCGAATA
 
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JMFS016F07+           CAATTTATATTTCGCGATTCTCTTCTTCCTCTTCAGCTCCGGTGTGGAGTACCACGCCCT
JMFF006E15+           CAATTTATATTTCGCGATTCTCTTCTTCCTCTTCAGCTCCGGTGTGGAGTACCACGCCCT
rJMFF002D07-          CAATTTATATTTCGCGATTCTCTTCTTCCTCTTCAGCTCCGGTGTGGAGTACCACGCCCT
                      ____________________________________________________________
consensus             CAATTTATATTTCGCGATTCTCTTCTTCCTCTTCAGCTCCGGTGTGGAGTACCACGCCCT
 
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JMFS016F07+           AGACGACGCCGCCGGCCTCGGT                                      
JMFF006E15+           AGACGACGCCGCCGGCCTCGGTGGTTCTGGACCCGATTTCTCTTCGTGGTAATCCACTCG
rJMFF002D07-          AGACGACGCCGCCGGCCTCGGTGGTTCTGGACCCGATTTCTCTTCGTGGTAATCCACTCG
                      ____________________________________________________________
consensus             AGACGACGCCGCCGGCCTCGGTGGTTCTGGACCCGATTTCTCTTCGTGGTAATCCACTCG
 
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JMFF006E15+           ACGACTGCGCAACGGCGGCTTGTTGTTAGGACAGCGCCGGCGATCAAATTTGCTCCAATC
JMFF002D07+                TGCGCAACGGCGGCTTGTTGTTAGGACAGCGCCGGCGATCAAATTTGCTCCAATC
rJMFF002D07-          ACGACTGCGCAACGGCGGCTTGTTGTTAGGACAGCGCCGGCGATCAAATTTGCTCCAATC
                      ____________________________________________________________
consensus             ACGACTGCGCAACGGCGGCTTGTTGTTAGGACAGCGCCGGCGATCAAATTTGCTCCAATC
 
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JMFF006E15+           CATGTATCCGTACTCCATAATTATTTTCTCTCTCTCTCTCTCTTTCTCTGGAGGAGGAGA
JMFF002D07+           CATGTATCCGTACTCCATAATTATTTTCTCTCTCTCTCTCTCTTTCTCTGGAGGAGGAGA
rJMFF002D07-          CATGTATCCGTACTCCATAATTATTTTCTCTCTCTCTCTCTCTTTCTCTGGAGGAGGAGA
                      ____________________________________________________________
consensus             CATGTATCCGTACTCCATAATTATTTTCTCTCTCTCTCTCTCTTTCTCTGGAGGAGGAGA
 
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JMFF006E15+           GAGATAAGAGGAGAGGAGAGGAGAGGAGAAGAGGATTGGAGTTAGAGCTAGAGCGAG   
JMFF002D07+           GAGATAAGAGGAGAGGAGAGGAGAGGAGAAGAGGATTGGAGTTAGAGCTAGAGCGAG   
rJMFF002D07-          GAGATAAGAGGAGAGGAGAGGAGAGGAGAAGAGGATTGGAGTTAGAGCTAGAGCGAGGAA
                      ____________________________________________________________
consensus             GAGATAAGAGGAGAGGAGAGGAGAGGAGAAGAGGATTGGAGTTAGAGCTAGAGCGAGGAA