Contig 002491:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026J24Sequence622002491 (2)gb|KJB35773.1|8e-52hypothetical protein B456_006G127600 [Gossypium raimondii]719000417 (3)emb|CDP09265.1|2e-80unnamed protein product [Coffea canephora]
JMSF052J23Sequence651002491 (2)ref|XP_011080360.1|6e-57PREDICTED: phospholipase A1-Igamma3, chloroplastic [Sesamum indicum]907000417 (3)emb|CDP09265.1|3e-125unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF026J24+ TCTGTTCACGCTGGAGTGCTGGAAGAA
JMSF052J23+ CCAGTNGGCGTGTTGGCTCCAGATTCTGTTCACGCTGGAGTGCTGGAAGAA
                      ____________________________________________________________
consensus CCAGTNGGCGTGTTGGCTCCAGATTCTGTTCACGCTGGAGTGCTGGAAGAA
 
. : . : . : . : . : . :
JMSF026J24+ GTTGGGGAGGTTGATGTTGGAGGTGGCGTAGAGGTAGCGGCTGATGCGGTAGCCACGGTC
JMSF052J23+ GTTGGGGAGGTTGATGTTGGAGGTGGCGTAGAGGTAGCGGCTGATGCGGTAGCCACGGTC
                      ____________________________________________________________
consensus GTTGGGGAGGTTGATGTTGGAGGTGGCGTAGAGGTAGCGGCTGATGCGGTAGCCACGGTC
 
. : . : . : . : . : . :
JMSF026J24+ CGCCATGCCCAGCTTCTCGAAGAACTGGGCGCCGTCGTACTTGCAGGTGCCGCAGTACTT
JMSF052J23+ CGCCATGCCCAGCTTCTCGAAGAACTGGGCGCCGTCGTACTTGCAGGTGCCGCAGTACTT
                      ____________________________________________________________
consensus CGCCATGCCCAGCTTCTCGAAGAACTGGGCGCCGTCGTACTTGCAGGTGCCGCAGTACTT
 
. : . : . : . : . : . :
JMSF026J24+ GGAGTGCGGGTCGAAGTCGAAGGAGTCGTAGCAGGCCTGGGCGAACTCGCCGTACCGGAT
JMSF052J23+ GGAGTGCGGGTCGAAGTCGAAGGAGTCGTAGCAGGCCTGGGCGAACTCGCCGTACCGGAT
                      ____________________________________________________________
consensus GGAGTGCGGGTCGAAGTCGAAGGAGTCGTAGCAGGCCTGGGCGAACTCGCCGTACCGGAT
 
. : . : . : . : . : . :
JMSF026J24+ GATTTCGCGGCGGAGATGGGAGTTCATGGGGTTCAGCAGCCCTTCCCAATCTTTGGATCC
JMSF052J23+ GATTTCGCGGCGGAGATGGGAGTTCATGGGGTTCAGCAGCCCTTCCCAATCTTTGGATCC
                      ____________________________________________________________
consensus GATTTCGCGGCGGAGATGGGAGTTCATGGGGTTCAGCAGCCCTTCCCAATCTTTGGATCC
 
. : . : . : . : . : . :
JMSF026J24+ TTGAATCTCCGCCCATATTTCATGCAGATTTCTTCCATCTTCTTCCACACACAATTCTTC
JMSF052J23+ TTGAATCTCCGCCCATATTTCATGCAGATTTCTTCCATCTTCTTCCACACACAATTCTTC
                      ____________________________________________________________
consensus TTGAATCTCCGCCCATATTTCATGCAGATTTCTTCCATCTTCTTCCACACACAATTCTTC
 
. : . : . : . : . : . :
JMSF026J24+ ATCCTCTTCTTGTTNTTCGTCATTCTTATTGGATGATTGACCAGTTTCACGCTGTGGTGG
JMSF052J23+ ATCCTCTTCTTGTTCTTCGTCATTCTTATTGGATGATTGACCAGTTTCACGCTGTGGTGG
                      ____________________________________________________________
consensus ATCCTCTTCTTGTTCTTCGTCATTCTTATTGGATGATTGACCAGTTTCACGCTGTGGTGG
 
. : . : . : . : . : . :
JMSF026J24+ AGCATTAATGGCAGCAGCAGGGAGAGAAACTCTGCATTTCAGGGATGAATAATGTGGGTT
JMSF052J23+ AGCATTAATGGCAGCAGCAGGGAGAGAAACTCTGCATTTCAGGGATGAATAATGTGGGTT
                      ____________________________________________________________
consensus AGCATTAATGGCAGCAGCAGGGAGAGAAACTCTGCATTTCAGGGATGAATAATGTGGGTT
 
. : . : . : . : . : . :
JMSF026J24+ TAGGGGAAAGAAGGAATTATTGGAAGGTTTTGCAGTAGTAGGTTTGGTTATGTTCATCAA
JMSF052J23+ TAGGGGAAAGAAGGAATTATTGGAAGGTTTTGCAGTAGTAGGTTTGGTTATGTTCATCAA
                      ____________________________________________________________
consensus TAGGGGAAAGAAGGAATTATTGGAAGGTTTTGCAGTAGTAGGTTTGGTTATGTTCATCAA
 
. : . : . : . : . : . :
JMSF026J24+ TGGCGGTGGCAAGCTTTCAGCAAAGATTGTGTGGTAGTTGTGTTTGAGAGAGATTTGGAG
JMSF052J23+ TGGCGGTGGCAAGCTTTCAGCAAAGATTGTGTGGTAGTTGTGTTTGAGAGAGATTTGGAG
                      ____________________________________________________________
consensus TGGCGGTGGCAAGCTTTCAGCAAAGATTGTGTGGTAGTTGTGTTTGAGAGAGATTTGGAG
 
. : . : . : . : . : . :
JMSF026J24+ AGACCCCATGGCCATTGGAGCTAGCTTCTGAGGTGGGTAAGTGCAGTGCAGTCT
JMSF052J23+ AGACCCCATGGCCATTGGAGCTAGCTTCTGAGGTGGGTAAGTGCAGTGCAGTCTTCTTTC
                      ____________________________________________________________
consensus AGACCCCATGGCCATTGGAGCTAGCTTCTGAGGTGGGTAAGTGCAGTGCAGTCTTCTTTC