Contig 002489:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN004O14Sequence616002489 (7)gb|AET07429.1|3e-113Or protein [Ipomoea batatas]
JMSF004N23Sequence314002489 (7)gb|AET07429.1|1e-30Or protein [Ipomoea batatas]180002489 (7)ref|XP_007131325.1|2e-18hypothetical protein PHAVU_011G004200g [Phaseolus vulgaris] gb|ESW03319.1| hypot
JMSF041O17Sequence794002489 (7)gb|AET07429.1|6e-140Or protein [Ipomoea batatas]817002489 (7)gb|AET07429.1|7e-145Or protein [Ipomoea batatas]
JMSF052D20Sequence644002489 (7)gb|AET07429.1|2e-75Or protein [Ipomoea batatas]872002489 (7)gb|AET07429.1|1e-145Or protein [Ipomoea batatas]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF041O17- CTTCACTTTAATATATGAGTTGTTTTATCACACCACTGTATTGCCAGCCAGCATTT
                      ____________________________________________________________
consensus CTTCACTTTAATATATGAGTTGTTTTATCACACCACTGTATTGCCAGCCAGCATTT
 
. : . : . : . : . : . :
rJMSF041O17- GATTTGGTCCGCAAACAGTTTATTAATTGCAAAATGCTCAAAATAACGTTGAAAAACTTT
rJMSF052D20- CGTTGAAAAACTTT
                      ____________________________________________________________
consensus GATTTGGTCCGCAAACAGTTTATTAATTGCAAAATGCTCAAAATAACGTTGAAAAACTTT
 
. : . : . : . : . : . :
rJMSF004N23- ACCAAAACATTTGTCCAGAATCTTTACATCTAGGAGCACTAN
rJMSF041O17- CTATAGACATACATTTTGACCAAAACATTTGTCCAGAATCTTTACATCTAGGAGCACTAG
rJMSF052D20- CTATAGACATACATTTTGACCAAAACATTTGTCCAGAATCTTTACATCTAGGAGCACTAG
                      ____________________________________________________________
consensus CTATAGACATACATTTTGACCAAAACATTTGTCCAGAATCTTTACATCTAGGAGCACTAG
 
. : . : . : . : . : . :
rJMSF004N23- AGCTACATGAGATTCCCATTTAATCAAATGGGTCAATTCGTGGGTCATGCTCGCTTGCCA
rJMSF041O17- AGCTACATGAGATTCCCATTTAATCAAATGGGTCAATTCGTGGGTCATGCTCGCTTGCCA
rJMSF052D20- AGCTACATGAGATTCCCATTTAATCAAATGGGTCAATTCGTGGGTCATGCTCGCTTGCCA
                      ____________________________________________________________
consensus AGCTACATGAGATTCCCATTTAATCAAATGGGTCAATTCGTGGGTCATGCTCGCTTGCCA
 
. : . : . : . : . : . :
rJMSF004N23- TAGCCATCCCAGTACAAAGACATGTAGGGCACATGACCTTCCCAGAACCCGAGCAGTTTG
rJMSF041O17- TAGCCATCCCAGTACAAAGACATGTAGGGCACATGACCTTCCCAGAACCCGAGCAGTTTG
rJMSF052D20- TAGCCATCCCAGTACAAAGACATGTAGGGCACATGACCTTCCCAGAACCCGAGCAGTTTG
                      ____________________________________________________________
consensus TAGCCATCCCAGTACAAAGACATGTAGGGCACATGACCTTCCCAGAACCCGAGCAGTTTG
 
. : . : . : . : . : . :
rJMSF004N23- TGCATCTTTCTGTTTTAG
rJMSF041O17- TGCATCTTTCTGTTTTAGGTGGAGATAGTGGCTGATCTCTACGATTAACTGTGGAGACAG
rJMSF052D20- TGCATCTTTCTGTTTTAGGTGGAGATAGTGGCTGATCTCTACGATTAACTGTGGAGACAG
                      ____________________________________________________________
consensus TGCATCTTTCTGTTTTAGGTGGAGATAGTGGCTGATCTCTACGATTAACTGTGGAGACAG
 
. : . : . : . : . : . :
rJMSF041O17- GTTCGATAAGGACTAGTGATCCAGTGCTTGAACAGCGAGCACATGCAAGATACCCTGTTC
rJMSF052D20- GTTCGATAAGGACTAGTGATCCAGTGCTTGAACAGCGAGCACATGCAAGATACCCTGTTC
                      ____________________________________________________________
consensus GTTCGATAAGGACTAGTGATCCAGTGCTTGAACAGCGAGCACATGCAAGATACCCTGTTC
 
. : . : . : . : . : . :
rJMSF041O17- CTAAACAGTACTTGCACCTCTTATGCTCCTGCTGTTTCACATTGTTTATTTCAACTACCA
rJMSF052D20- CTAAACAGTACTTGCACCTCTTATGCTCCTGCTGTTTCACATTGTTTATTTCAACTACCA
JMSF041O17+ TATTTCAACTACCA
                      ____________________________________________________________
consensus CTAAACAGTACTTGCACCTCTTATGCTCCTGCTGTTTCACATTGTTTATTTCAACTACCA
 
. : . : . : . : . : . :
rJMSF041O17- TCAAGGCAGAGATTACCCCAACTGCTCCACCGGAGAAGGATGCCACAATGGGGTCCACAT
rJMSF052D20- TCAAGGCAGAGATTACCCCAACTGCTCCACCGGAGAAGGATGCCACAATGGGGTCCACAT
JMSF041O17+ TCAAGGCAGAGATTACCCCAACTGCTCCACCGGAGAAGGATGCCACAATGGGGTCCACAT
                      ____________________________________________________________
consensus TCAAGGCAGAGATTACCCCAACTGCTCCACCGGAGAAGGATGCCACAATGGGGTCCACAT
 
. : . : . : . : . : . :
rJMSF041O17- CACTTAATTGCATCGGAAGGTGCATGCTGCGAATGAAATCAGCGTACGATGTACCTCCTA
rJMSF052D20- CACTTAATTGCATCGGAAGGTGCATGCTGCGAATGAAATCAGCGTACGATGTACCTCCTA
JMFN004O14+ GAATGAAATCAGCGTACGATGTACCTCCTA
JMSF041O17+ CACTTAATTGCATCGGAAGGTGCATGCTGCGAATGAAATCAGCGTACGATGTACCTCCTA
                      ____________________________________________________________
consensus CACTTAATTGCATCGGAAGGTGCATGCTGCGAATGAAATCAGCGTACGATGTACCTCCTA
 
. : . : . : . : . : . :
rJMSF041O17- AGCCCAATTTTAGTTCCAAAGTAGGTGCTAGCAGTCCGCCAAAAAGCATAACTCCGGCTA
rJMSF052D20- AGCCCAATTTTAGTTCCAAAGTAGGTGCTAGCAGTCCGCCAAAAAGCATAACTCCGGCTA
JMFN004O14+ AGCCCAATTTTAGTTCCAAAGTAGGTGCTAGCAGTCCGCCAAAAAGCATAACTCCGGCTA
JMSF041O17+ AGCCCAATTTTAGTTCCAAAGTAGGTGCTAGCAGTCCGCCAAAAAGCATAACTCCGGCTA
JMSF052D20+ TCCAAAGTAGGTGCTAGCAGTCCGCCAAAAAGCATAACTCCGGCTA
                      ____________________________________________________________
consensus AGCCCAATTTTAGTTCCAAAGTAGGTGCTAGCAGTCCGCCAAAAAGCATAACTCCGGCTA
 
. : . : . : . : . : . :
rJMSF041O17- TGAGAGAGAAACAAGTGGCATAATATTGTTTAAGATTTGCGGATGTGAGAGGAGGCAAAA
rJMSF052D20- TGAGAGAGAAACAAGTGGCATAATATTGTTTAAGATTTGCGGATGTGAGAGGAGGCAAAA
JMFN004O14+ TGAGAGAGAAACAAGTGGCATAATATTGTTTAAGATTTGCGGATGTGAGAGGAGGCAAAA
JMSF041O17+ TGAGAGAGAAACAAGTGGCATAATATTGTTTAAGATTTGCGGATGTGAGAGGAGGCAAAA
JMSF052D20+ TGAGAGAGAAACAAGTGGCATAATATTGTTTAAGATTTGCGGATGTGAGAGGAGGCAAAA
                      ____________________________________________________________
consensus TGAGAGAGAAACAAGTGGCATAATATTGTTTAAGATTTGCGGATGTGAGAGGAGGCAAAA
 
. : . : . : . : . : . :
rJMSF041O17- AAGGAATGAACGAAGGAAAATTCGGAAGTTCATTTTCTTGCTTTTCATTAAGAATCCCAA
rJMSF052D20- AAGGAATGAACGAAGGAAAATTCGGAAGTTCATTTTCTTGCTTTTCATTAAGAATCCCAA
JMFN004O14+ AAGGAATGAACGAAGGAAAATTCGGAAGTTCATTTTCTTGCTTTTCATTAAGAATCCCAA
JMSF041O17+ AAGGAATGAACGAAGGAAAATTCGGAAGTTCATTTTCTTGCTTTTCATTAAGAATCCCAA
JMSF052D20+ AAGGAATGAACGAAGGAAAATTCGGAAGTTCATTTTCTTGCTTTTCATTAAGAATCCCAA
                      ____________________________________________________________
consensus AAGGAATGAACGAAGGAAAATTCGGAAGTTCATTTTCTTGCTTTTCATTAAGAATCCCAA
 
. : . : . : . : . : . :
rJMSF041O17- GCTCAGCATTCTTAATTCGTTGCTGTATTCTCAGCCTGCGG
rJMSF052D20- GCTCAGCATTCTTAATTCGTTGCTGTATTCTCAGCCTGCGGAC--CTTCCATATGCAAAA
JMFN004O14+ GTTCAGCATTCTTAATTCGTTGCTGTATTCTCAGCCTGCGGACCTCTTCCATATGCAAAA
JMSF041O17+ GCTCAGCATTCTTAATTCGTTGCTGTATTCTCAGCCTGCGGACCTCTTCCATATGCAAAA
JMSF052D20+ GCTCAGCATTCTTAATTCGTTGCTGTATTCTCAGCCTGCGGAC--CTTCCATATGCAAAA
                      ____________________________________________________________
consensus GCTCAGCATTCTTAATTCGTTGCTGTATTCTCAGCCTGCGGAC--CTTCCATATGCAAAA
 
. : . : . : . : . : . :
rJMSF052D20- ATATTTTATTCCGGCGACTCCGAATATTGTCTTGAATTTCTTTCAATTCCATTTGAGCAA
JMFN004O14+ ATATTTTATTCCGGCGACTCCGAATATTGTCTTGAATTTCTTTCAATTCCATTTGAGCAA
JMSF041O17+ ATATTTTATTCCGGCGACTCCGAATATTGTCTTGAATTTCTTTCAATTCCATTTGAGCAA
JMSF004N23+ AGCAA
JMSF052D20+ ATATTTTATTCCGGCGACTCCGAATATTGTCTTGAATTTCTTTCAATTCCATTTGAGCAA
                      ____________________________________________________________
consensus ATATTTTATTCCGGCGACTCCGAATATTGTCTTGAATTTCTTTCAATTCCATTTGAGCAA
 
. : . : . : . : . : . :
rJMSF052D20- AGTCCTGCACTGTCTCAGGCCCTTCTATAATGCAAAACGCGGAAGCGTTTTTATCGGGTG
JMFN004O14+ AGTCCTGCACTGTCTCAGGCCCTTCTATAATGCAAAACGCGGAAGCGTTTTTATCGGGTG
JMSF041O17+ AGTCCTGCACTGTCTCAGGCCCTTCTATAATGCAAAACGCGGAAGCGTTTTTATCGGGTG
JMSF004N23+ AGTCCTGCACTGTCTCAGNCCCTTCTATAATGCAAAACGCGGAAGCGTTTTTATCGGGTG
JMSF052D20+ AGTCCTGCACTGTCTCAGGCCCTTCTATAATGCAAAACGCGGAAGCGTTTTTATCGGGTG
                      ____________________________________________________________
consensus AGTCCTGCACTGTCTCAGGCCCTTCTATAATGCAAAACGCGGAAGCGTTTTTATCGGGTG
 
. : . : . : . : . : . :
rJMSF052D20- ATTCGGTGTCGACGGATGAA
JMFN004O14+ ATTCGGTGTCGACGGATGAAGAAAAGGAGGAGGAATCGGCATCAGCGGCCATGGAACGCA
JMSF041O17+ ATTCGGTGTCGACGGATGAAGAAAAGGAGGAGGAATCGGCATCAGCGGCCATGGAACGCA
JMSF004N23+ ATTCGGTGTCGACGGATGAAGAAAAGGAGGAGGAATCGGCATCAGCGGCCATGGAACGCA
JMSF052D20+ ATTCGGTGTCGACGGATGAAGAAAAGGAGGAGGAATCGGCATCAGCGGCCATGGAACGCA
                      ____________________________________________________________
consensus ATTCGGTGTCGACGGATGAAGAAAAGGAGGAGGAATCGGCATCAGCGGCCATGGAACGCA
 
. : . : . : . : . : . :
JMFN004O14+ ACCTGACTCTGGATTTGAGCCTTCCATGAAGATGATACCGGGAACTGTGGAACGGCGAAG
JMSF041O17+ ACCTGACTCTGGATTTGAGCCTTCCATGAAGATGATACCGGGAACTGTGGAACGGCGAAG
JMSF004N23+ ACCTGACTCTGGATTTGAGCCTTCCATGAAGATGATACCGGGAACTGTGGAACGGCGAAG
JMSF052D20+ ACCTGACTCTGGATTTGAGCCTTCCATGAAGATGATACCGGGAACTGTGGAACGGCGAAG
                      ____________________________________________________________
consensus ACCTGACTCTGGATTTGAGCCTTCCATGAAGATGATACCGGGAACTGTGGAACGGCGAAG
 
. : . : . : . : . : . :
JMFN004O14+ TGGAGAGATGAAACGGCGTCGTGGAGGACGAGAGCGACAAGATTCTACCTGAATATACCA
JMSF041O17+ TGGAGAGATGAAACGGCGTCGTGGAGGACGAGAGCGACAAGATTCTACCTGAATATACCA
JMSF004N23+ TGGAGAGATGAAACGGCGTCGTGGAGGACGAGAGCGACAAGATTCTACCTGAATATACCA
JMSF052D20+ TGGAGAGATGAAACGGCGTCGTGGAGGACGAGAGCGACAAGATTCTACCTGAATATACCA
                      ____________________________________________________________
consensus TGGAGAGATGAAACGGCGTCGTGGAGGACGAGAGCGACAAGATTCTACCTGAATATACCA
 
. : . : . : . : . : . :
JMFN004O14+ TTTCAGGGAAAAGGAGAAGAGCTCTGAGATTAACGTCGAGCTCAAG
JMSF041O17+ TTTCAGGGAAAAGGAGAAGAGCTCTGAGATTAACGTCGAGCTCAAGCTGTATATTCTGTT
JMSF004N23+ TTTCAGGGAAAAGGAGAAGAGCTCTGAGATTAACGTCGAGCTCAAGCTGTATATTCTGTT
JMSF052D20+ TTTCAGGGAAAAGGAGAAGAGCTCTGAGATTAACGTCGAGCTCAAGCTGTATATTCTGTT
                      ____________________________________________________________
consensus TTTCAGGGAAAAGGAGAAGAGCTCTGAGATTAACGTCGAGCTCAAGCTGTATATTCTGTT
 
. : . : . : . : . : . :
JMSF041O17+ CTGTTGGTAAAATAAGAGAGAGAAAGAGACGAGACAAAGGAAGTATCAAACTTGAGTG
JMSF004N23+ CTGT
JMSF052D20+ CTGTTGGTAAAATAAGAGAGAGAAAGAGACGAGACAAAGGAAGTATCAAACTTGAGTGTC
                      ____________________________________________________________
consensus CTGTTGGTAAAATAAGAGAGAGAAAGAGACGAGACAAAGGAAGTATCAAACTTGAGTGTC