Contig 002481:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF021H12Sequence620002481 (4)ref|XP_009625183.1|88.6PREDICTED: uncharacterized protein LOC104116092 [Nicotiana tomentosiformis]769005609 (5)ref|XP_009625183.1|335PREDICTED: uncharacterized protein LOC104116092 [Nicotiana tomentosiformis]
JMSF033E01Sequence643002481 (4)ref|XP_009625183.1|88.6PREDICTED: uncharacterized protein LOC104116092 [Nicotiana tomentosiformis]708005609 (5)ref|XP_009625183.1|327PREDICTED: uncharacterized protein LOC104116092 [Nicotiana tomentosiformis]
JMSF042H18Sequence747002481 (4)ref|XP_009625183.1|89.0PREDICTED: uncharacterized protein LOC104116092 [Nicotiana tomentosiformis]791005609 (5)ref|XP_009625183.1|326PREDICTED: uncharacterized protein LOC104116092 [Nicotiana tomentosiformis]
JMSF051G09Sequence663002481 (4)ref|XP_006347799.1|99.4PREDICTED: uncharacterized protein LOC102599811 [Solanum tuberosum]737005609 (5)ref|XP_009625183.1|325PREDICTED: uncharacterized protein LOC104116092 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF042H18+                                                                 TCGGAT
                      ____________________________________________________________
consensus                                                                   TCGGAT
 
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JMSF042H18+           AGGAAGCCAGAGACGAGAATGAAAGCAGCGAAGCTCATCAATATGAGAAAGAAACTGGAA
                      ____________________________________________________________
consensus             AGGAAGCCAGAGACGAGAATGAAAGCAGCGAAGCTCATCAATATGAGAAAGAAACTGGAA
 
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JMSF033E01+                                                      CAAATCCAAAAGGGGAG
JMSF021H12+                                                      CAAATCCAAAAGGGGAG
JMSF042H18+           CCAACCCCAACAGCAGGACNTACGTAAACCCCACCTCCTCCTCCAAATCCAAAAGGGGAG
JMSF051G09+                                                                    GAG
                      ____________________________________________________________
consensus             CCAACCCCAACAGCAGGACNTACGTAAACCCCACCTCCTCCTCCAAATCCAAAAGGGGAG
 
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JMSF033E01+           GGGGCATAGTAGGGCGCGGAATACGAAAAGCTGGGGCCCGCAATCCGGGTGGAGTAACTC
JMSF021H12+           GGGGCATAGTAGGGCGCGGAATACGAAAAGCTGGGGCCCGCAATCCGGGTGGAGTAACTC
JMSF042H18+           GGGGCATAGTAGGGCGCGGAATACGAAAAGCTGGGGCCCGCAATCCGGGTGGAGTAACTC
JMSF051G09+           GGGGCATAGTAGGGCGCGGAATACGAAAAGCTGGGGCCCGCAATCCGGGTGGAGTAACTC
                      ____________________________________________________________
consensus             GGGGCATAGTAGGGCGCGGAATACGAAAAGCTGGGGCCCGCAATCCGGGTGGAGTAACTC
 
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JMSF033E01+           CTGGATGAGGATGAGGAGGAGGAGGAGGAAAAAGAGCGTCCGCCGACTCTGCCGCCGGAT
JMSF021H12+           CTGGATGAGGATGAGGAGGAGGAGGAGGAAAAAGAGCGTCCGCCGACTCTGCCGCCGGAT
JMSF042H18+           CTGGATGAGGATGAGGAGGAGGAGGAGGAAAAAGAGCGTCCGCCGACTCTGCCGCCGGAT
JMSF051G09+           CTGGATGAGGATGAGGAGGAGGAGGAGGAAAAAGAGCGTCCGCCGACTCTGCCGCCGGAT
                      ____________________________________________________________
consensus             CTGGATGAGGATGAGGAGGAGGAGGAGGAAAAAGAGCGTCCGCCGACTCTGCCGCCGGAT
 
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JMSF033E01+           GCGGCCAACGCCGAGTTAGGATCGTACATTAAAAACAAACCGACAAGCAGGGCGGCCACC
JMSF021H12+           GCGGCCAACGCCGAGTTAGGATCGTACATTAAAAACAAACCGACAAGCAGGGCGGCCACC
JMSF042H18+           GCGGCCAACGCCGAGTTAGGATCGTACATTAAAAACAAACCGACAAGCAGGGCGGCCACC
JMSF051G09+           GCGGCCAACGCCGAGTTAGGATCGTACATTAAAAACAAACCGACAAGCAGGGCGGCCACC
                      ____________________________________________________________
consensus             GCGGCCAACGCCGAGTTAGGATCGTACATTAAAAACAAACCGACAAGCAGGGCGGCCACC
 
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JMSF033E01+           GCGGGCTTACGCAAAGCCTTGAGGGCATTCACAATACCTCTTGCCACAACCTCAAACGGG
JMSF021H12+           GCGGGCTTACGCAAAGCCTTGAGGGCATTCACAATACCTCTTGCCACAACCTCAAACGGG
JMSF042H18+           GCGGGCTTACGCAAAGCCTTGAGGGCATTCACAATACCTCTTGCCACAACCTCAAACGGG
JMSF051G09+           GCGGGCTTACGCAAAGCCTTGAGGGCATTCACAATACCTCTTGCCACAACCTCAAACGGG
                      ____________________________________________________________
consensus             GCGGGCTTACGCAAAGCCTTGAGGGCATTCACAATACCTCTTGCCACAACCTCAAACGGG
 
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JMSF033E01+           TGTCCATTATTATTATTATTATTATTGATTGGGCGCACCACTTTATTGAGAAGCTTAAGC
JMSF021H12+           TGTCCATTATTATTATTATTATTATTGATTGGGCGCACCACTTTATTGAGAAGCTTAAGC
JMSF042H18+           TGTCCATTATTATTATTATTATTATTGATTGGGCGCACCACTTTATTGAGAAGCTTAAGC
JMSF051G09+           TGTCCATTATTATTATTATTATTATTGATTGGGCGCACCACTTTATTGAGAAGCTTAAGC
                      ____________________________________________________________
consensus             TGTCCATTATTATTATTATTATTATTGATTGGGCGCACCACTTTATTGAGAAGCTTAAGC
 
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JMSF033E01+           TTAGCAGAATTGTGATCCTCCTGGGTGGAAGATTTAGAGTTGGCGAAGAGGCATTTGAGA
JMSF021H12+           TTAGCAGAATTGTGATCCTCCTGGGTGGAAGATTTAGAGTTGGCGAAGAGGCATTTGAGA
JMSF042H18+           TTAGCAGAATTGTGATCCTCCTGGGTGGAAGATTTAGAGTTGGCGAAGAGGCATTTGAGA
JMSF051G09+           TTAGCAGAATTGTGATCCTCCTGGGTGGAAGATTTAGAGTTGGCGAAGAGGCATTTGAGA
                      ____________________________________________________________
consensus             TTAGCAGAATTGTGATCCTCCTGGGTGGAAGATTTAGAGTTGGCGAAGAGGCATTTGAGA
 
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JMSF033E01+           TTGAATTTCGAATAGGGTCTATGAAGCCTCCTAATGGTAGAGGGGGAATGTGACAAGGAG
JMSF021H12+           TTGAATTTCGAATAGGGTCTATGAAGCCTCCTAATGGTAGAGGGGGAATGTGACAAGGAG
JMSF042H18+           TTGAATTTCGAATAGGGTCTATGAAGCCTCCTAATGGTAGAGGGGGAATGTGACAAGGAG
JMSF051G09+           TTGAATTTCGAATAGGGTCTATGAAGCCTCCTAATGGTAGAGGGGGAATGTGACAAGGAG
                      ____________________________________________________________
consensus             TTGAATTTCGAATAGGGTCTATGAAGCCTCCTAATGGTAGAGGGGGAATGTGACAAGGAG
 
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JMSF033E01+           GGGCCCCCGTAAAGAAATCGAATTGGACTTGGGGGCTGCACTAAATGGTGGTTCCATTTG
JMSF021H12+           GGGCCCCCGTAAAGAAATCGAATTGGACTTGGGGGCTGCACTAAATGGTGGTTCCATTTG
JMSF042H18+           GGGCCCCCGTAAAGAAATCGAATTGGACTTGGGGGCTGCACTAAATGGTGGTTCCATTTG
JMSF051G09+           GGGCCCCCGTAAAGAAATCGAATTGGACTTGGGGGCTGCACTAAATGGTGGTTCCATTTG
                      ____________________________________________________________
consensus             GGGCCCCCGTAAAGAAATCGAATTGGACTTGGGGGCTGCACTAAATGGTGGTTCCATTTG
 
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JMSF033E01+           AGGTTTGATTCTAGCAAAAATGGAGCAATCGCCATCGCCATAAGCACCGAAGCAGAGGAG
JMSF021H12+           AGGTTTGATTCTAGCAAAAATGGAGCAATCGCCATCGCCATAAGCACCGAAGCAGAGGAG
JMSF042H18+           AGGTTTGATTCTAGCAAAAATGGAGCAATCGCCATCGCCATAAGCACCGAAGCAGAGGAG
JMSF051G09+           AGGTTTGATTCTAGCAAAAATGGAGCAATCGCCATCGCCATAAGCACCGAAGCAGAGGAG
                      ____________________________________________________________
consensus             AGGTTTGATTCTAGCAAAAATGGAGCAATCGCCATCGCCATAAGCACCGAAGCAGAGGAG
 
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JMSF033E01+           ATACTGAAAATGGGTTGAAGAACAGAACAGATATTTTTGGAGGAGAGAGAGAGAGAAGAG
JMSF021H12+           ATACTGAAAATGGGTTGAAGAACAGAACAGATATTTTTGGAGGAGAGAGAGAGAGAAGAG
JMSF042H18+           ATACTGAAAATGGGTTGAAGAACAGAACAGATATTTTTGGAGGAGAGAGAGAGAGAAGAG
JMSF051G09+           ATACTGAAAATGGGTTGAAGAACAGAACAGATATTTTTGGAGGAGAGAGAGAGAGAAGAG
                      ____________________________________________________________
consensus             ATACTGAAAATGGGTTGAAGAACAGAACAGATATTTTTGGAGGAGAGAGAGAGAGAAGAG
 
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JMSF033E01+           TAGTAGAAAGAAAGAAGA                                          
JMSF042H18+           TAGTAGAAAGAAAGAAGA                                          
JMSF051G09+           TAGTAGAAAGAAAGAAGACCACTCTTCTCCAGAACCAGAAGGAGGGAAACCAAAGCTGTC
                      ____________________________________________________________
consensus             TAGTAGAAAGAAAGAAGACCACTCTTCTCCAGAACCAGAAGGAGGGAAACCAAAGCTGTC