Contig 002474:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005I04Sequence213002474 (3)261001500 (3)ref|XP_004251492.1|2e-05PREDICTED: vesicle-associated protein 4-1-like [Solanum lycopersicum]
JMSF050P23Sequence226002474 (3)692001500 (3)ref|XP_009616169.1|1e-104PREDICTED: vesicle-associated protein 4-1-like isoform X2 [Nicotiana tomentosif
JMSF052F21Sequence162002474 (3)846001500 (3)ref|XP_009616169.1|9e-114PREDICTED: vesicle-associated protein 4-1-like isoform X2 [Nicotiana tomentosif

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF005I04+ ACCAAACTCCCTCCGAACAACAATTTCT
                      ____________________________________________________________
consensus ACCAAACTCCCTCCGAACAACAATTTCT
 
. : . : . : . : . : . :
JMSF005I04+ TTACCTCTCTGTTTTTCTTCTTCTCCAGAGGATTTCAATTTTCAGCNGGCCNTGAAAATC
JMSF052F21+ GGATTTCAATTTTCAGCNGGCCNTGAAAATC
JMSF050P23+ GGATTTCAATTTTCAGCNGGCCCTGAAAATC
                      ____________________________________________________________
consensus TTACCTCTCTGTTTTTCTTCTTCTCCAGAGGATTTCAATTTTCAGCNGGCCCTGAAAATC
 
. : . : . : . : . : . :
JMSF005I04+ NCGGAATTCAGATTGGCTGAGAGCAGTGGTTGACTTGAAATCCAAATCCGATGTTTACTT
JMSF052F21+ NCGGAATTCAGATTGGCTGAGAGCNGTGGTTGACTTGAAATCCAAATCCGATGTTTACTT
JMSF050P23+ NCGGAATTCAGATTGGCTGAGAGCNGTGGTTGACTTGAAATCCAAATNCGATGTTTACTT
                      ____________________________________________________________
consensus NCGGAATTCAGATTGGCTGAGAGCAGTGGTTGACTTGAAATCCAAATCCGATGTTTACTT
 
. : . : . : . : . : . :
JMSF005I04+ ACGTAAGATATCAAAGTNTACGAGAAGT-AAAAAAAAAACAAAAGAAAAAATCGTCGTAT
JMSF052F21+ ACGTAAGATATCAAAGTTTTCGGGAAGTAAAAAAAAAAACAAAAGAAAAAATCGTCGTAT
JMSF050P23+ ACGTAAGATATCAAAGTTTNCGNGAAGTAAAAAAAAAAACAAAAGAAAAAATCGTCGTAT
                      ____________________________________________________________
consensus ACGTAAGATATCAAAGTTTTCGGGAAGTAAAAAAAAAAACAAAAGAAAAAATCGTCGTAT
 
. : . : . : . : . : . :
JMSF005I04+ TCACT
JMSF052F21+ TCACT
JMSF050P23+ TCACTGTCGGGGAGTATGGTGGTTTCAGTTGATTGAAGAGGAAAGTTGCATTGTCTCCCC
                      ____________________________________________________________
consensus TCACTGTCGGGGAGTATGGTGGTTTCAGTTGATTGAAGAGGAAAGTTGCATTGTCTCCCC