Contig 002470:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047J12Sequence623002470 (2)gb|EYU41362.1|8e-90hypothetical protein MIMGU_mgv1a0060842mg, partial [Erythranthe guttata]555004410 (2)gb|EYU41363.1|8e-75hypothetical protein MIMGU_mgv1a0060841mg, partial [Erythranthe guttata]
JMSF050H19Sequence662002470 (2)gb|EYU41362.1|2e-96hypothetical protein MIMGU_mgv1a0060842mg, partial [Erythranthe guttata]747004410 (2)emb|CDP02648.1|7e-103unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF050H19+                                                                     TC
                      ____________________________________________________________
consensus                                                                       TC
 
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JMFF047J12+                                 CATATGATCCTCCAAATAAAACCACAGGGCATGCCTGG
JMSF050H19+           ATCCATGTTGCAAGCATTCCACCATATGATCCTCCAAATAAAACCACAGGGCATGCCTGG
                      ____________________________________________________________
consensus             ATCCATGTTGCAAGCATTCCACCATATGATCCTCCAAATAAAACCACAGGGCATGCCTGG
 
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JMFF047J12+           GCAGAAGTATTGCGTTGNAGCTCAGTGATTAACACTGCAAAATCTGCCAACGCTTGTTCA
JMSF050H19+           GCAGAAGTATTGCGTTTGAGCTCAGTGATTAACACTGCAAAATCTGCCAACGCTTGTTCA
                      ____________________________________________________________
consensus             GCAGAAGTATTGCGTTTGAGCTCAGTGATTAACACTGCAAAATCTGCCAACGCTTGTTCA
 
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JMFF047J12+           GTTGTTAGATATGCCAACGTGGTCGCATTCTTATATGCCTCTTCCTTACTTCCGTAGGGC
JMSF050H19+           GTTGTTAGATATGCCAACGTGGTCGCATTCTTATATGCCTCTTCCTTACTTCCGTAGGGC
                      ____________________________________________________________
consensus             GTTGTTAGATATGCCAACGTGGTCGCATTCTTATATGCCTCTTCCTTACTTCCGTAGGGC
 
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JMFF047J12+           ATTGATTCTCCATAGTATCTATGTTCGGGGAAGATAACCATGGCGCCGAAGCGAGGCGCG
JMSF050H19+           ATTGATTCTCCATAGTATCTATGTTCGGGGAAGATAACCATGGCGCCGAAGCGAGGCGCG
                      ____________________________________________________________
consensus             ATTGATTCTCCATAGTATCTATGTTCGGGGAAGATAACCATGGCGCCGAAGCGAGGCGCG
 
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JMFF047J12+           AGTTCCCAGACGAGACCGGAATTGGCGGCAAACCATTCGATGTCTCCTTCATTGCCGCAG
JMSF050H19+           AGTTCCCAGACGAGACCGGAATTGGCGGCAAACCATTCGATGTCTCCTTCATTGCCGCAG
                      ____________________________________________________________
consensus             AGTTCCCAGACGAGACCGGAATTGGCGGCAAACCATTCGATGTCTCCTTCATTGCCGCAG
 
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JMFF047J12+           TAGAAGAAGATGGGGCCAAGGCGAGACGGGCCTAGCCAGTGATCGGTGTTGATGAGGTAA
JMSF050H19+           TAGAAGAAGATGGGGCCAAGGCGAGACGGGCCTAGCCAGTGATCGGTGTTGATGAGGTAA
                      ____________________________________________________________
consensus             TAGAAGAAGATGGGGCCAAGGCGAGACGGGCCTAGCCAGTGATCGGTGTTGATGAGGTAA
 
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JMFF047J12+           CGGTGACGAAAGGGAGGGAGATCGGCGAAGCTGAAGTGGTCCAGCCGCTGCTGGAAGTAG
JMSF050H19+           CGGTGACGAAAGGGAGGGAGATCGGCGAAGCTGAAGTGGTCCAGCCGCTGCTGGAAGTAG
                      ____________________________________________________________
consensus             CGGTGACGAAAGGGAGGGAGATCGGCGAAGCTGAAGTGGTCCAGCCGCTGCTGGAAGTAG
 
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JMFF047J12+           CGAATCTCGTATTTGTAGTGCGGTGCTCCGATTGTCTTGGAGGGTAATCGCAGGAATTTG
JMSF050H19+           CGAATCTCGTATTTGTAGTGCGGTGCTCCGATTGTCTTGGAGGGTAATCGCAGGAATTTG
                      ____________________________________________________________
consensus             CGAATCTCGTATTTGTAGTGCGGTGCTCCGATTGTCTTGGAGGGTAATCGCAGGAATTTG
 
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JMFF047J12+           TTGCGAAAGCGAGCGGCGGACTTGGAAGATCGTGGAAGAGAGAAGGAGGTTTGCGACGAG
JMSF050H19+           TTGCGAAAGCGAGCGGCGGACTTGGAAGATCGTGGAAGAGAGAAGGAGGTTTGCGACGAG
                      ____________________________________________________________
consensus             TTGCGAAAGCGAGCGGCGGACTTGGAAGATCGTGGAAGAGAGAAGGAGGTTTGCGACGAG
 
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JMFF047J12+           ACGAAGAACAGGAAGAGTAGGCACAGTATGAACGGCGGCGAACTCGCCATTGTTCAGTAG
JMSF050H19+           ACGAAGAACAGGAAGAGTAGGCACAGTATGAACGGCGGCGAACTCGCCATTGTTCAGTAG
                      ____________________________________________________________
consensus             ACGAAGAACAGGAAGAGTAGGCACAGTATGAACGGCGGCGAACTCGCCATTGTTCAGTAG
 
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JMFF047J12+           TTTAGTTCAACGGAGTGTGACGGTGACTCAGTGGGAAGTGTTCC                
JMSF050H19+           TTTAGTTCAACGGAGTGTGACGGTGACTCAGTGGGAAGTGTTCCAAACTTCCAAGAGTTC
                      ____________________________________________________________
consensus             TTTAGTTCAACGGAGTGTGACGGTGACTCAGTGGGAAGTGTTCCAAACTTCCAAGAGTTC