Contig 002466:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008P13Sequence606002466 (4)emb|CDP11719.1|7e-40unnamed protein product [Coffea canephora]683001200 (4)ref|XP_011074767.1|3e-88PREDICTED: DEAD-box ATP-dependent RNA helicase 5 [Sesamum indicum]
JMFF012H10Sequence579002466 (4)emb|CDP11719.1|1e-33unnamed protein product [Coffea canephora]733001200 (4)ref|XP_011074767.1|3e-87PREDICTED: DEAD-box ATP-dependent RNA helicase 5 [Sesamum indicum]
JMFF044N19Sequence638002466 (4)gb|EYU29070.1|9e-45hypothetical protein MIMGU_mgv1a006477mg [Erythranthe guttata]412001200 (4)
JMSF050D20Sequence655002466 (4)gb|EYU29070.1|3e-46hypothetical protein MIMGU_mgv1a006477mg [Erythranthe guttata]798001200 (4)ref|XP_011074767.1|1e-119PREDICTED: DEAD-box ATP-dependent RNA helicase 5 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF044N19+ AAGGCAAAGAGGATTCCTTGGCTTTTTCCCGTTTCTTTTGCTCATAA
JMFF008P13+ TGCTCATAA
JMSF050D20+ TGAAAGCACAAGGCAAAGAGGATTCCTTGGCTTTTTCCCGTTTCTTTTGCTCATAA
                      ____________________________________________________________
consensus TGAAAGCACAAGGCAAAGAGGATTCCTTGGCTTTTTCCCGTTTCTTTTGCTCATAA
 
. : . : . : . : . : . :
JMFF044N19+ CGTGCATTATGGCTGGGATGCCAAATGCCAATGTCTTACCTGACCCGGTTGCTGCTATCC
JMFF008P13+ CGTGCATTATGGCTGGGATGCCAAATGCCAATGTCTTACCTGACCCGGTTGCTGCTATCC
JMFF012H10+ TGCCAAATGCCAATGTCTTACCTGACCCGGTTGCTGCTATCC
JMSF050D20+ CGTGCATTATGGCTGGGATGCCAAATGCCAATGTCTTACCTGACCCGGTTGCTGCTATCC
                      ____________________________________________________________
consensus CGTGCATTATGGCTGGGATGCCAAATGCCAATGTCTTACCTGACCCGGTTGCTGCTATCC
 
. : . : . : . : . : . :
JMFF044N19+ CAATAAAATCTCGGCCGTTCAACAGAAACGGCCAGGAATGGGACTGAATTGGAGATGGCT
JMFF008P13+ CAATAAAATCTCGGCCGTTCAACAGAAACGGCCAGGAATGGGACTGAATTGGAGATGGCT
JMFF012H10+ CAATAAAATCTCGGCCGTTCAACAGAAACGGCCAGGAATGGGACTGAATTGGAGATGGCT
JMSF050D20+ CAATAAAATCTCGGCCGTTCAACAGAAACGGCCAGGAATGGGACTGAATTGGAGATGGCT
                      ____________________________________________________________
consensus CAATAAAATCTCGGCCGTTCAACAGAAACGGCCAGGAATGGGACTGAATTGGAGATGGCT
 
. : . : . : . : . : . :
JMFF044N19+ TTTCAAAATCTTTGCAGCATTCCAACACCTTATCAGGAAGCCCCGAGTCCGAGAATTTCT
JMFF008P13+ TTTCAAAATCTTTGCAGCATTCCAACACCTTATCAGGAAGCCCCGAGTCCGAGAATTTCT
JMFF012H10+ TTTCAAAATCTTTGCAGCATTCCAACACCTTATCAGGAAGCCCCGAGTCCGAGAATTTCT
JMSF050D20+ TTTCAAAATCTTTGCAGCATTCCAACACCTTATCAGGAAGCCCCGAGTCCGAGAATTTCT
                      ____________________________________________________________
consensus TTTCAAAATCTTTGCAGCATTCCAACACCTTATCAGGAAGCCCCGAGTCCGAGAATTTCT
 
. : . : . : . : . : . :
JMFF044N19+ CCAAAGCTTTAAACTTTAAATTGTTCACATCTTTCCCAGAAACGACGACTCCCTCACTGC
JMFF008P13+ CCAAAGCTTTAAACTTTAAATTGTTCACATCTTTCCCAGAAACGACGACTCCCTCACTGC
JMFF012H10+ CCAAAGCTTTAAACTTTAAATTGTTCACATCTTTCCCAGAAACGACGACTCCCTCACTGC
JMSF050D20+ CCAAAGCTTTAAACTTTAAATTGTTCACATCTTTCCCAGAAACGACGACTCCCTCACTGC
                      ____________________________________________________________
consensus CCAAAGCTTTAAACTTTAAATTGTTCACATCTTTCCCAGAAACGACGACTCCCTCACTGC
 
. : . : . : . : . : . :
JMFF044N19+ TTTCCATAATCTCAACTGACCCATTGTTCGAAACCTCTACTCCTTCCTTATTATTCGCCT
JMFF008P13+ TTTCCATAATCTCAACTGACCCATTGTTCGAAACCTCTACTCCTTCCTTATTATTCGCCT
JMFF012H10+ TTTCCATAATCTCAACTGACCCATTGTTCGAAACCTCTACTCCTTCCTTATTATTCGCCT
JMSF050D20+ TTTCCATAATCTCAACTGACCCATTGTTCGAAACCTCTACTCCTTCCTTATTATTCGCCT
                      ____________________________________________________________
consensus TTTCCATAATCTCAACTGACCCATTGTTCGAAACCTCTACTCCTTCCTTATTATTCGCCT
 
. : . : . : . : . : . :
JMFF044N19+ TTCCCGATATATCCACCGACCCATTAAGTCCTTCGATCTCCCCAACATGATCTTTGGCCT
JMFF008P13+ TTCCCGATATATCCACCGACCCATTAAGTCCTTCGATCTCCCCAACATGATCTTTGGCCT
JMFF012H10+ TTCCCGATATATCCACCGACCCATTAAGTCCTTCGATCTCCCCAACATGATCTTTGGCCT
JMSF050D20+ TTCCCGATATATCCACCGACCCATTAAGTCCTTCGATCTCCCCAACATGATCTTTGGCCT
                      ____________________________________________________________
consensus TTCCCGATATATCCACCGACCCATTAAGTCCTTCGATCTCCCCAACATGATCTTTGGCCT
 
. : . : . : . : . : . :
JMFF044N19+ CCTCGTCATCCTTGTGTTTCTGTTTCTTCTTCTTCTTCTTCTCTTTATTAGACTCTCTTA
JMFF008P13+ CCTCGTCATCCTTGTGTTTCTGTTTCTTCTTCTTCTTCTTCTCTTTATTAGACTCTCTTA
JMFF012H10+ CCTCGTCATCCTTGTGTTTCTGTTTCTTCTTCTTCTTCTTCTCTTTATTAGACTCTCTTA
JMSF050D20+ CCTCGTCATCCTTGTGTTTCTGTTTCTTCTTCTTCTTCTTCTCTTTATTAGACTCTCTTA
                      ____________________________________________________________
consensus CCTCGTCATCCTTGTGTTTCTGTTTCTTCTTCTTCTTCTTCTCTTTATTAGACTCTCTTA
 
. : . : . : . : . : . :
JMFF044N19+ CGATTTCGGGCTCTGGCTCGGCCTCTGGGTGTTCAAGCTTTCGCTTGTGCTTCTTCTTAG
JMFF008P13+ CGATTTCGGGCTCTGGCTCGGCCTCTGGGTGTTCAAGCTTTCGCTTGTGCTTCTTCTTAG
JMFF012H10+ CGATTTCGGGCTCTGGCTCGGCCTCTGGGTGTTCAAGCTTTCGCTTGTGCTTCTTCTTAG
JMSF050D20+ CGATTTCGGGCTCTGGCTCGGCCTCTGGGTGTTCAAGCTTTCGCTTGTGCTTCTTCTTAG
                      ____________________________________________________________
consensus CGATTTCGGGCTCTGGCTCGGCCTCTGGGTGTTCAAGCTTTCGCTTGTGCTTCTTCTTAG
 
. : . : . : . : . : . :
JMFF044N19+ ATTTGATCTCGTGATTTTCAATGGTGCCGGAGGTTAGGGGCTCTGAGAGGATTGCAGTGT
JMFF008P13+ ATTTGATCTCGTGATTTTCAATGGTGCCGGAGGTTAGGGGCTCTGAGAGGATTGCAGTGT
JMFF012H10+ ATTTGATCTCGTGATTTTCAATGGTGCCGGAGGTTAGGGGCTCTGAGAGGATTGCAGTGT
JMSF050D20+ ATTTGATCTCGTGATTTTCAATGGTGCCGGAGGTTAGGGGCTCTGAGAGGATTGCAGTGT
                      ____________________________________________________________
consensus ATTTGATCTCGTGATTTTCAATGGTGCCGGAGGTTAGGGGCTCTGAGAGGATTGCAGTGT
 
. : . : . : . : . : . :
JMFF044N19+ CATGGTGCTTTCTACCCATGGCTGCTGAAACCGGTAGAGAAGTGAAAACCC
JMFF008P13+ CATGGTGCTTTCTACCCATGGCTGCTGAAACCGGTAGAGAAGTGAAAACCC
JMFF012H10+ CATGGTGCTTTCTACCCATGGCTGCTGAAACCGGTAGAGAAGTGAAAACCC
JMSF050D20+ CATGGTGCTTT-TACCCATGGCTGCTGAAACCGGTAGAGAAGTGAAAACCCTAAACCCCC
                      ____________________________________________________________
consensus CATGGTGCTTTCTACCCATGGCTGCTGAAACCGGTAGAGAAGTGAAAACCCTAAACCCCC