clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF031E05 | Sequence | 540 | 002429 (5) | ref|XP_006343519.1| | 3e-37 | PREDICTED: uncharacterized protein LOC102599775 isoform X1 [Solanum tuberosum] | 737 | 006886 (4) | ref|XP_009609945.1| | 96.7 | PREDICTED: uncharacterized protein LOC104103724 [Nicotiana tomentosiformis] ref| |
JMFS111B08 | Sequence | 627 | 002429 (5) | ref|XP_006343519.1| | 6e-57 | PREDICTED: uncharacterized protein LOC102599775 isoform X1 [Solanum tuberosum] | |||||
JMSF013J05 | Sequence | 577 | 002429 (5) | ref|XP_006343519.1| | 5e-45 | PREDICTED: uncharacterized protein LOC102599775 isoform X1 [Solanum tuberosum] | 689 | 006886 (4) | ref|XP_009609945.1| | 93.6 | PREDICTED: uncharacterized protein LOC104103724 [Nicotiana tomentosiformis] ref| |
JMSF045A11 | Sequence | 638 | 002429 (5) | ref|XP_009781696.1| | 212 | PREDICTED: uncharacterized protein LOC104230558 [Nicotiana sylvestris] ref|XP_00 | 587 | 006886 (4) | |||
JMSF046K20 | Sequence | 736 | 002429 (5) | ref|XP_009781696.1| | 207 | PREDICTED: uncharacterized protein LOC104230558 [Nicotiana sylvestris] ref|XP_00 | 647 | 006886 (4) | ref|XP_009609945.1| | 87.4 | PREDICTED: uncharacterized protein LOC104103724 [Nicotiana tomentosiformis] ref| |
This contig is upended
. : . : . : . : . : . :
JMSF046K20+ GAAGTGTAACCATTTG
____________________________________________________________
consensus GAAGTGTAACCATTTG
. : . : . : . : . : . :
JMSF046K20+ TAAAAAAAGCTGGCCTTGCAGGGGGGTTGAACTGATAAGGTGGTGGTTTCATCGAAGTAC
JMFS111B08+ CATCGAAGTAC
JMSF045A11+ GGGGGTTGACCTGATGAGGTGGTGGTCTCATCGAAGTAC
____________________________________________________________
consensus TAAAAAAAGCTGGCCTTGCAGGGGGGTTGACCTGATGAGGTGGTGGTTTCATCGAAGTAC
. : . : . : . : . : . :
JMSF046K20+ TTCTAATTGAAACTCTACATTTACTGTCATATATAGACCTTTTTGTTTGGTCTGAAAGCA
JMFS111B08+ TTCTAATTGAAACTCTACATTTACTGTCATATATAGACCTTTTTGTTTGGTCTGAAAGCA
JMSF045A11+ TTCTAATTGAAACTCTACATTTACTGTCATATATAGACCTTTTTGTTTGGTCTGAAAGCA
____________________________________________________________
consensus TTCTAATTGAAACTCTACATTTACTGTCATATATAGACCTTTTTGTTTGGTCTGAAAGCA
. : . : . : . : . : . :
JMSF046K20+ CAACATTTGCCTCCCCAATAAGCTTAAAAGCAGCTTCTGCACCAGGGAACTTGTTCTTGT
JMFS111B08+ GAACATTTGCCTCCCCAATAAGCTTAAAAGCAGCTTCTGCACCAGGGAACTTGTTCTTGT
JMFF031E05+ GT
JMSF013J05+ CTTAAAAGCAGCTTCTGCACCAGGGAACTTGTTCTTGT
JMSF045A11+ GAACATTTGCCTCCCCAATAAGCTTAAAAGCAGCTTCTGCACCAGGGAACTTGTTCTTGT
____________________________________________________________
consensus GAACATTTGCCTCCCCAATAAGCTTAAAAGCAGCTTCTGCACCAGGGAACTTGTTCTTGT
. : . : . : . : . : . :
JMSF046K20+ CGGGGTGAAGGACAAGTGCGAGTTTTCGGTACTGTTTCTTAATGGTTACTTCATCTGCTG
JMFS111B08+ CGGGGTGAAGGACAAGTGCGAGCTTCCGGTACTGTTTCTTAATGGTTACTTCATCTGCTG
JMFF031E05+ CGGGGTGAAGGACAAGTGCGAGCTTCCGGTACTGTTTCTTAATGGTTACTTCATCTGCTG
JMSF013J05+ CGGGGTGAAGGACAAGTGCGAGCTTCCGGTACTGTTTCTTAATGGTTACTTCATCTGCTG
JMSF045A11+ CGGGGTGAAGGACAAGTGCGAGCTTCCGGTACTGTTTCTTAATGGTTACTTCATCTGCTG
____________________________________________________________
consensus CGGGGTGAAGGACAAGTGCGAGCTTCCGGTACTGTTTCTTAATGGTTACTTCATCTGCTG
. : . : . : . : . : . :
JMSF046K20+ ATCTATCAACTTGAAGGATTCCATACCAATCCTTGTCCAATCCCACCATGTTTTTAGCTG
JMFS111B08+ ATCTATCAACTTGAAGGATTCCATACCAATCCTTGTCCAATCCCAACATGTTTTTAGCTG
JMFF031E05+ ATCTATCAACTTGAAGGATACCATACCAATCCTTGTCCAATCCCAACATGTTTTTAGCTG
JMSF013J05+ ATCTATCAACTTGAAGGATTCCATACCAATCCTTGTCCAATCCCAACATGTTTTTAGCTG
JMSF045A11+ ATCTATCAACTTGAAGGATTCCATACCAATCCTTGTCCAATCCCAACATGTTTTTAGCTG
____________________________________________________________
consensus ATCTATCAACTTGAAGGATTCCATACCAATCCTTGTCCAATCCCAACATGTTTTTAGCTG
. : . : . : . : . : . :
JMSF046K20+ AACAATGAACATTGCAGACAGCTAGCAACTGATTAATGTTCTCTAGATCAGGGTAAAGTC
JMFS111B08+ AACAATGAACATTGCAGACAGCTAGCAACTGATTAATGTTCTCTAGATCAGGGTAAAGTC
JMFF031E05+ AACAATGAACATTGCAGACAGCTAGCAACTGATTAATGTTCTCTAGATCAGGGTAAAGTC
JMSF013J05+ AACAATGAACATTGCAGACAGCTAGCAACTGATTAATGTTCTCTAGATCAGGGTAAAGTC
JMSF045A11+ AACAATGAACATTGCAGACAGCTAGCAACTGATTAATGTTCTCTAGATCAGGGTAAAGTC
____________________________________________________________
consensus AACAATGAACATTGCAGACAGCTAGCAACTGATTAATGTTCTCTAGATCAGGGTAAAGTC
. : . : . : . : . : . :
JMSF046K20+ GTTGAGCTTTAGCTGCAATCTTCTGGGCCACTTCAAAATCATTATTTTGCATTTTCTTCT
JMFS111B08+ GTTGAGCTTTAGCTGCAACCTTCTGGGCCCCTTCAAAATCATTATTTTGCATTTTCTTCT
JMFF031E05+ GTTGAGCTTTAGCTGCAACCTTCTGGGCCCCTTCAAAATCATTATTTTGCATTTTCTTCT
JMSF013J05+ GTTGAGCTTTAGCTGCAACCTTCTGGGCCCCTTCAAAATCATTATTTTGCATTTTCTTCT
JMSF045A11+ GTTGAGCTTTAGCTGCAACCTTCTGGGCCCCTTCAAAATCATTATTTTGCATTTTCTTCT
____________________________________________________________
consensus GTTGAGCTTTAGCTGCAACCTTCTGGGCCCCTTCAAAATCATTATTTTGCATTTTCTTCT
. : . : . : . : . : . :
JMSF046K20+ CTGCAAGCTCCTTAGCCTTGAGGGCTTCATCTTTATTGCACTCCATCAATAGTACCAAAA
JMFS111B08+ CTGCAAGCTCCTTAGCCTTGAGGGCTTCATCTTTGTTGCACTCCATCAAAAGTACCAAAA
JMFF031E05+ CTGCAAGCTCCTTAGCCTTGAGGGCTTCATCTTTGTTGCACTCCATCAAAAGTACCAAAA
JMSF013J05+ CTGCAAGCTCCTTAGCCTTGAGGGCTTCATCTTTGTTGCACTCCATCAAAAGTACCAAAA
JMSF045A11+ CTGCAAGCTCCTTAGCCTTGAGGGCTTCATCTTTGTTGCACTCCATCAAAAGTACCAAAA
____________________________________________________________
consensus CTGCAAGCTCCTTAGCCTTGAGGGCTTCATCTTTGTTGCACTCCATCAAAAGTACCAAAA
. : . : . : . : . : . :
JMSF046K20+ TATACATCAACCATTCAAATCACCAATGTGCAGCACATAAAATGAATCTGCAACCAGTCC
JMFS111B08+ AATACGTCAACCATTCAAATCACCAATGTGCAGTACAT-AAATGAACCTGCAACCAGTCC
JMFF031E05+ AATACGTCAACCATTCAAATCACCAATGTGCAGTACAT-AAATGAACCTGCAACCAGTCC
JMSF013J05+ AATACGTCAACCATTCAAATCACCAATGTGCAGTACAT-AAATGAACCTGCAACCAGTCC
JMSF045A11+ AATACGTCAACCATTCAAATCACCAATGTGCAGTACAT-AAATGAACCTGCAACCAGTCC
____________________________________________________________
consensus AATACGTCAACCATTCAAATCACCAATGTGCAGTACAT-AAATGAACCTGCAACCAGTCC
. : . : . : . : . : . :
JMSF046K20+ TTTTCATGCCCAACA
JMFS111B08+ TTTTCATGCCCAACA
JMFF031E05+ TTTTCATGCCCAACA
JMSF013J05+ TTTTCATGCCCAACA
JMSF045A11+ TTTTCATGCCCAACAAGGAGTCAAGGAGTTGCCCTCTGCTCAGCCGTCCAGTCCACCGCC
____________________________________________________________
consensus TTTTCATGCCCAACAAGGAGTCAAGGAGTTGCCCTCTGCTCAGCCGTCCAGTCCACCGCC
. : . : . : . : . : . :
JMSF045A11+ GGTCTGGTTCACGTCGTCACTCCACCGCTCCACCGCTGTCAGTTCCGCACGATGTCCCAC
____________________________________________________________
consensus GGTCTGGTTCACGTCGTCACTCCACCGCTCCACCGCTGTCAGTTCCGCACGATGTCCCAC