Contig 002429:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031E05Sequence540002429 (5)ref|XP_006343519.1|3e-37PREDICTED: uncharacterized protein LOC102599775 isoform X1 [Solanum tuberosum] 737006886 (4)ref|XP_009609945.1|96.7PREDICTED: uncharacterized protein LOC104103724 [Nicotiana tomentosiformis] ref|
JMFS111B08Sequence627002429 (5)ref|XP_006343519.1|6e-57PREDICTED: uncharacterized protein LOC102599775 isoform X1 [Solanum tuberosum]
JMSF013J05Sequence577002429 (5)ref|XP_006343519.1|5e-45PREDICTED: uncharacterized protein LOC102599775 isoform X1 [Solanum tuberosum] 689006886 (4)ref|XP_009609945.1|93.6PREDICTED: uncharacterized protein LOC104103724 [Nicotiana tomentosiformis] ref|
JMSF045A11Sequence638002429 (5)ref|XP_009781696.1|212PREDICTED: uncharacterized protein LOC104230558 [Nicotiana sylvestris] ref|XP_00587006886 (4)
JMSF046K20Sequence736002429 (5)ref|XP_009781696.1|207PREDICTED: uncharacterized protein LOC104230558 [Nicotiana sylvestris] ref|XP_00647006886 (4)ref|XP_009609945.1|87.4PREDICTED: uncharacterized protein LOC104103724 [Nicotiana tomentosiformis] ref|

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF046K20+ GAAGTGTAACCATTTG
                      ____________________________________________________________
consensus GAAGTGTAACCATTTG
 
. : . : . : . : . : . :
JMSF046K20+ TAAAAAAAGCTGGCCTTGCAGGGGGGTTGAACTGATAAGGTGGTGGTTTCATCGAAGTAC
JMFS111B08+ CATCGAAGTAC
JMSF045A11+ GGGGGTTGACCTGATGAGGTGGTGGTCTCATCGAAGTAC
                      ____________________________________________________________
consensus TAAAAAAAGCTGGCCTTGCAGGGGGGTTGACCTGATGAGGTGGTGGTTTCATCGAAGTAC
 
. : . : . : . : . : . :
JMSF046K20+ TTCTAATTGAAACTCTACATTTACTGTCATATATAGACCTTTTTGTTTGGTCTGAAAGCA
JMFS111B08+ TTCTAATTGAAACTCTACATTTACTGTCATATATAGACCTTTTTGTTTGGTCTGAAAGCA
JMSF045A11+ TTCTAATTGAAACTCTACATTTACTGTCATATATAGACCTTTTTGTTTGGTCTGAAAGCA
                      ____________________________________________________________
consensus TTCTAATTGAAACTCTACATTTACTGTCATATATAGACCTTTTTGTTTGGTCTGAAAGCA
 
. : . : . : . : . : . :
JMSF046K20+ CAACATTTGCCTCCCCAATAAGCTTAAAAGCAGCTTCTGCACCAGGGAACTTGTTCTTGT
JMFS111B08+ GAACATTTGCCTCCCCAATAAGCTTAAAAGCAGCTTCTGCACCAGGGAACTTGTTCTTGT
JMFF031E05+ GT
JMSF013J05+ CTTAAAAGCAGCTTCTGCACCAGGGAACTTGTTCTTGT
JMSF045A11+ GAACATTTGCCTCCCCAATAAGCTTAAAAGCAGCTTCTGCACCAGGGAACTTGTTCTTGT
                      ____________________________________________________________
consensus GAACATTTGCCTCCCCAATAAGCTTAAAAGCAGCTTCTGCACCAGGGAACTTGTTCTTGT
 
. : . : . : . : . : . :
JMSF046K20+ CGGGGTGAAGGACAAGTGCGAGTTTTCGGTACTGTTTCTTAATGGTTACTTCATCTGCTG
JMFS111B08+ CGGGGTGAAGGACAAGTGCGAGCTTCCGGTACTGTTTCTTAATGGTTACTTCATCTGCTG
JMFF031E05+ CGGGGTGAAGGACAAGTGCGAGCTTCCGGTACTGTTTCTTAATGGTTACTTCATCTGCTG
JMSF013J05+ CGGGGTGAAGGACAAGTGCGAGCTTCCGGTACTGTTTCTTAATGGTTACTTCATCTGCTG
JMSF045A11+ CGGGGTGAAGGACAAGTGCGAGCTTCCGGTACTGTTTCTTAATGGTTACTTCATCTGCTG
                      ____________________________________________________________
consensus CGGGGTGAAGGACAAGTGCGAGCTTCCGGTACTGTTTCTTAATGGTTACTTCATCTGCTG
 
. : . : . : . : . : . :
JMSF046K20+ ATCTATCAACTTGAAGGATTCCATACCAATCCTTGTCCAATCCCACCATGTTTTTAGCTG
JMFS111B08+ ATCTATCAACTTGAAGGATTCCATACCAATCCTTGTCCAATCCCAACATGTTTTTAGCTG
JMFF031E05+ ATCTATCAACTTGAAGGATACCATACCAATCCTTGTCCAATCCCAACATGTTTTTAGCTG
JMSF013J05+ ATCTATCAACTTGAAGGATTCCATACCAATCCTTGTCCAATCCCAACATGTTTTTAGCTG
JMSF045A11+ ATCTATCAACTTGAAGGATTCCATACCAATCCTTGTCCAATCCCAACATGTTTTTAGCTG
                      ____________________________________________________________
consensus ATCTATCAACTTGAAGGATTCCATACCAATCCTTGTCCAATCCCAACATGTTTTTAGCTG
 
. : . : . : . : . : . :
JMSF046K20+ AACAATGAACATTGCAGACAGCTAGCAACTGATTAATGTTCTCTAGATCAGGGTAAAGTC
JMFS111B08+ AACAATGAACATTGCAGACAGCTAGCAACTGATTAATGTTCTCTAGATCAGGGTAAAGTC
JMFF031E05+ AACAATGAACATTGCAGACAGCTAGCAACTGATTAATGTTCTCTAGATCAGGGTAAAGTC
JMSF013J05+ AACAATGAACATTGCAGACAGCTAGCAACTGATTAATGTTCTCTAGATCAGGGTAAAGTC
JMSF045A11+ AACAATGAACATTGCAGACAGCTAGCAACTGATTAATGTTCTCTAGATCAGGGTAAAGTC
                      ____________________________________________________________
consensus AACAATGAACATTGCAGACAGCTAGCAACTGATTAATGTTCTCTAGATCAGGGTAAAGTC
 
. : . : . : . : . : . :
JMSF046K20+ GTTGAGCTTTAGCTGCAATCTTCTGGGCCACTTCAAAATCATTATTTTGCATTTTCTTCT
JMFS111B08+ GTTGAGCTTTAGCTGCAACCTTCTGGGCCCCTTCAAAATCATTATTTTGCATTTTCTTCT
JMFF031E05+ GTTGAGCTTTAGCTGCAACCTTCTGGGCCCCTTCAAAATCATTATTTTGCATTTTCTTCT
JMSF013J05+ GTTGAGCTTTAGCTGCAACCTTCTGGGCCCCTTCAAAATCATTATTTTGCATTTTCTTCT
JMSF045A11+ GTTGAGCTTTAGCTGCAACCTTCTGGGCCCCTTCAAAATCATTATTTTGCATTTTCTTCT
                      ____________________________________________________________
consensus GTTGAGCTTTAGCTGCAACCTTCTGGGCCCCTTCAAAATCATTATTTTGCATTTTCTTCT
 
. : . : . : . : . : . :
JMSF046K20+ CTGCAAGCTCCTTAGCCTTGAGGGCTTCATCTTTATTGCACTCCATCAATAGTACCAAAA
JMFS111B08+ CTGCAAGCTCCTTAGCCTTGAGGGCTTCATCTTTGTTGCACTCCATCAAAAGTACCAAAA
JMFF031E05+ CTGCAAGCTCCTTAGCCTTGAGGGCTTCATCTTTGTTGCACTCCATCAAAAGTACCAAAA
JMSF013J05+ CTGCAAGCTCCTTAGCCTTGAGGGCTTCATCTTTGTTGCACTCCATCAAAAGTACCAAAA
JMSF045A11+ CTGCAAGCTCCTTAGCCTTGAGGGCTTCATCTTTGTTGCACTCCATCAAAAGTACCAAAA
                      ____________________________________________________________
consensus CTGCAAGCTCCTTAGCCTTGAGGGCTTCATCTTTGTTGCACTCCATCAAAAGTACCAAAA
 
. : . : . : . : . : . :
JMSF046K20+ TATACATCAACCATTCAAATCACCAATGTGCAGCACATAAAATGAATCTGCAACCAGTCC
JMFS111B08+ AATACGTCAACCATTCAAATCACCAATGTGCAGTACAT-AAATGAACCTGCAACCAGTCC
JMFF031E05+ AATACGTCAACCATTCAAATCACCAATGTGCAGTACAT-AAATGAACCTGCAACCAGTCC
JMSF013J05+ AATACGTCAACCATTCAAATCACCAATGTGCAGTACAT-AAATGAACCTGCAACCAGTCC
JMSF045A11+ AATACGTCAACCATTCAAATCACCAATGTGCAGTACAT-AAATGAACCTGCAACCAGTCC
                      ____________________________________________________________
consensus AATACGTCAACCATTCAAATCACCAATGTGCAGTACAT-AAATGAACCTGCAACCAGTCC
 
. : . : . : . : . : . :
JMSF046K20+ TTTTCATGCCCAACA
JMFS111B08+ TTTTCATGCCCAACA
JMFF031E05+ TTTTCATGCCCAACA
JMSF013J05+ TTTTCATGCCCAACA
JMSF045A11+ TTTTCATGCCCAACAAGGAGTCAAGGAGTTGCCCTCTGCTCAGCCGTCCAGTCCACCGCC
                      ____________________________________________________________
consensus TTTTCATGCCCAACAAGGAGTCAAGGAGTTGCCCTCTGCTCAGCCGTCCAGTCCACCGCC
 
. : . : . : . : . : . :
JMSF045A11+ GGTCTGGTTCACGTCGTCACTCCACCGCTCCACCGCTGTCAGTTCCGCACGATGTCCCAC
                      ____________________________________________________________
consensus GGTCTGGTTCACGTCGTCACTCCACCGCTCCACCGCTGTCAGTTCCGCACGATGTCCCAC