Contig 002423:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF044L15+                                                     GGGAGTGTGGCAGCCAT
JMSF044L15-                                                      GGGAGTGTGGCAGCCAT
                      ____________________________________________________________
consensus                                                        GGGAGTGTGGCAGCCAT
 
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rJMSF044L15+          TCATTCGTCACCTAATCCGAATGATCCGTACGCCCAACTACCCAACAAATTCTACTACTC
JMSF044L15-           TCATTCGTCACCTAATCCGAATGATCCGTACGCCCAACTACCCAACAAATTCTACTACTC
                      ____________________________________________________________
consensus             TCATTCGTCACCTAATCCGAATGATCCGTACGCCCAACTACCCAACAAATTCTACTACTC
 
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rJMSF044L15+          GCCCCGTCGCCCGCTACTCTCTTTCACTCACTCTCTTTCCATTTCCCTGTAAATATCACA
JMSF044L15-           GCCCCGTCGCCCGCTACTCTCTTTCACTCACTCTCTTTCCATTTCCCTGTAAATATCACA
                      ____________________________________________________________
consensus             GCCCCGTCGCCCGCTACTCTCTTTCACTCACTCTCTTTCCATTTCCCTGTAAATATCACA
 
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rJMSF044L15+          CCCTTCAATTCTGCCATGGCAGTTGTACTGGAAGCTCTCACTACAGTTCCTCGCTCCTTC
JMSF044L15-           CCCTTCAATTCTGCCATGGCAGTTGTACTGGAAGCTCTCACTACAGTTCCTCGCTCCTTC
                      ____________________________________________________________
consensus             CCCTTCAATTCTGCCATGGCAGTTGTACTGGAAGCTCTCACTACAGTTCCTCGCTCCTTC
 
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rJMSF044L15+          CCTCTCACGTCGGTCTCATCCTCATTGGCTCCCGTCGCCGCCTCTTCCATCTCCTGTAGG
JMSF044L15-           CCTCTCACGTCGGTCTCATCCTCATTGGCTCCCGTCGCCGCCTCTTCCATCTCCTGTAGG
                      ____________________________________________________________
consensus             CCTCTCACGTCGGTCTCATCCTCATTGGCTCCCGTCGCCGCCTCTTCCATCTCCTGTAGG
 
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rJMSF044L15+          TTAAACTCCGTTCGGTTCTCCCACTTCCGCGGTCTTAAGATCCAACCGCCTCGCTCAATC
JMSF044L15-           TTAAACTCCGTTCGGTTCTCCCACTTCCGCGGTCTTAAGATCCAACCGCCTCGCTCAATC
                      ____________________________________________________________
consensus             TTAAACTCCGTTCGGTTCTCCCACTTCCGCGGTCTTAAGATCCAACCGCCTCGCTCAATC
 
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rJMSF044L15+          GTTTCCACCTCTAAATTACCTCCACGCGGAAGCCCCATCGTCTGCGAGGCTCAGAATACC
JMSF044L15-           GTTTCCACCTCTAAATTACCTCCACGCGGAAGCCCCATCGTCTGCGAGGCTCAGAATACC
                      ____________________________________________________________
consensus             GTTTCCACCTCTAAATTACCTCCACGCGGAAGCCCCATCGTCTGCGAGGCTCAGAATACC
 
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rJMSF044L15+          GCAGTTGAAGGATAATAAGGCTAGCACCCGACCCGGATCATAAGTGTGCATCTGACCCGG
JMSF044L15-           GCAGTTGAAGGATAATAAGGCTAGCACCCGACCCGGATCATAAGTGTGCATCTGACCCGG
                      ____________________________________________________________
consensus             GCAGTTGAAGGATAATAAGGCTAGCACCCGACCCGGATCATAAGTGTGCATCTGACCCGG
 
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rJMSF044L15+          CACCATAGTTGACCCGACACCGCATGGATGCTCCAACGGTTAGAATTCCAACAGGTGTCA
JMSF044L15-           CACCATAGTTGACCCGACACCGCATGGATGCTCCAACGGTTAGAATTCCAACAGGTGTCA
                      ____________________________________________________________
consensus             CACCATAGTTGACCCGACACCGCATGGATGCTCCAACGGTTAGAATTCCAACAGGTGTCA
 
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rJMSF044L15+          CATCTAATGTCATTGAAGCCACCATTGATGCCACCATTGATGAGAGAGAGTTAAAGCCTC
JMSF044L15-           CATCTAATGTCATTGAAGCCACCATTGATGCCACCATTGATGAGAGAGAGTTAAAGCCTC
                      ____________________________________________________________
consensus             CATCTAATGTCATTGAAGCCACCATTGATGCCACCATTGATGAGAGAGAGTTAAAGCCTC
 
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rJMSF044L15+          AACGCCTCATTCATGACTCTTCATATTCCTGTCGTTAGCTCAGCTCCCCAAGGATGTCTC
JMSF044L15-           AACGCCTCATTCATGACTCTTCATATTCCTGTCGTTAGCTCAGCTCCCCAAGGATGTCTC
                      ____________________________________________________________
consensus             AACGCCTCATTCATGACTCTTCATATTCCTGTCGTTAGCTCAGCTCCCCAAGGATGTCTC
 
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rJMSF044L15+          TTCATGTTGTTACCGTTAGGACCTAGCATAAATAGAACTTCCCTCAGCTGAGCAGG    
JMSF044L15-           TTCATGTTGTTACCGTTAGGACCTAGCATAAATAGAACTTCCCTCAGCTGAGCAGGACAC
                      ____________________________________________________________
consensus             TTCATGTTGTTACCGTTAGGACCTAGCATAAATAGAACTTCCCTCAGCTGAGCAGGACAC
 
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JMSF044L15-           ACTGTACTTTCTATACTGAGACAAAGGCAATACAACTATTGTTACTCTCTAAAAAAAAAA
                      ____________________________________________________________
consensus             ACTGTACTTTCTATACTGAGACAAAGGCAATACAACTATTGTTACTCTCTAAAAAAAAAA