Contig 002413:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN017I15Sequence642002413 (2)ref|XP_009766591.1|1e-107PREDICTED: ribosome biogenesis protein TSR3 homolog [Nicotiana sylvestris]
JMSF043G21Sequence763002413 (2)ref|XP_006464289.1|3e-60PREDICTED: ribosome biogenesis protein TSR3 homolog [Citrus sinensis]715021564ref|XP_006345858.1|5e-57PREDICTED: ribosome biogenesis protein TSR3 homolog [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF043G21+ TGCTACCAACCATGGCACTGCAATTCTCATAGGGATCATTAAG
                      ____________________________________________________________
consensus TGCTACCAACCATGGCACTGCAATTCTCATAGGGATCATTAAG
 
. : . : . : . : . : . :
JMSF043G21+ TTAATAAACTTGTGAAGGACATGTAAAACTGAATCCTAGTTACATTTTACATAATAATAT
                      ____________________________________________________________
consensus TTAATAAACTTGTGAAGGACATGTAAAACTGAATCCTAGTTACATTTTACATAATAATAT
 
. : . : . : . : . : . :
JMSF043G21+ TTACAACTCCAAAAATGGGAAACTTGCACTTTGAGAAAGTAATTGGAAAGCAAATAGACA
                      ____________________________________________________________
consensus TTACAACTCCAAAAATGGGAAACTTGCACTTTGAGAAAGTAATTGGAAAGCAAATAGACA
 
. : . : . : . : . : . :
JMSF043G21+ AGAAACAACACAAAAAGGTATACTGAAATCAGTTATGATTTAACTCATTTAAGAGAGGAA
                      ____________________________________________________________
consensus AGAAACAACACAAAAAGGTATACTGAAATCAGTTATGATTTAACTCATTTAAGAGAGGAA
 
. : . : . : . : . : . :
JMFN017I15+ AAAGACGAGGAGCAGCACAACGTAGCTTCGCAAAAGGT
JMSF043G21+ GCATATTAATCTAAGTTCATACAAAGACGAGGAGCAGCACAACGTAGCTTCGCAAAAGGT
                      ____________________________________________________________
consensus GCATATTAATCTAAGTTCATACAAAGACGAGGAGCAGCACAACGTAGCTTCGCAAAAGGT
 
. : . : . : . : . : . :
JMFN017I15+ ACATCATCCAAGCGTGCCCATGAACAATCCACAACAGCTAATCCCTTCCGTTCAATTAAT
JMSF043G21+ ACATCATCCAAGCGTGCCCATGAACAATCCACAACAGCTAATCCCTTCCGTTCAATTAAT
                      ____________________________________________________________
consensus ACATCATCCAAGCGTGCCCATGAACAATCCACAACAGCTAATCCCTTCCGTTCAATTAAT
 
. : . : . : . : . : . :
JMFN017I15+ GCATGATCTTCTCTGGAGATGCAATGTGATCCAGCAGGACTTAAAGCAATGCCACCAAAA
JMSF043G21+ GCATGATCTTCTCTGGAGATGCAATGTGATCCAGCAGGACTTAAAGCAATGCCACCAAAA
                      ____________________________________________________________
consensus GCATGATCTTCTCTGGAGATGCAATGTGATCCAGCAGGACTTAAAGCAATGCCACCAAAA
 
. : . : . : . : . : . :
JMFN017I15+ CCACTGTTAACACGCAATTCTTTCAACAAACCAAATCTTGCAAGCTTGCGTCCAGTGCAT
JMSF043G21+ CCACTGTTAACACGCAATTCTTTCAACAAACCAAATCTTGCAAGCTTGCGTCCAGTGCAT
                      ____________________________________________________________
consensus CCACTGTTAACACGCAATTCTTTCAACAAACCAAATCTTGCAAGCTTGCGTCCAGTGCAT
 
. : . : . : . : . : . :
JMFN017I15+ CTCTTTGAATCACATTGACCAAAATCCCACACAGCAAGCTGAACACTAGGGCGTTCTTTA
JMSF043G21+ CTCTTTGAATCACATTGACCAAAATCCCACACAGCAAGCTGAACACTAGGGCGTTCTTTA
                      ____________________________________________________________
consensus CTCTTTGAATCACATTGACCAAAATCCCACACAGCAAGCTGAACACTAGGGCGTTCTTTA
 
. : . : . : . : . : . :
JMFN017I15+ TCCTCCTCTTCACCTGAATCAACGGGTAGTGACTCCTCATTACTGAGCGGATAAAGAGGT
JMSF043G21+ TCCTCCTCTTCACCTGAATCAACGGGTAGTGACTCCTCATTACTGAGCGGATAAAGAGGT
                      ____________________________________________________________
consensus TCCTCCTCTTCACCTGAATCAACGGGTAGTGACTCCTCATTACTGAGCGGATAAAGAGGT
 
. : . : . : . : . : . :
JMFN017I15+ TGATGGCTGCGGCTGGTTTGGCCGCGATGGTTCTTGAATCGCCTCTGCTTATTGTTACCC
JMSF043G21+ TGATGGCTGCGGCTGGTTTGGCCGCGATGGTTCTTGAATCGCCTCTGCTTATTGTTACCC
                      ____________________________________________________________
consensus TGATGGCTGCGGCTGGTTTGGCCGCGATGGTTCTTGAATCGCCTCTGCTTATTGTTACCC
 
. : . : . : . : . : . :
JMFN017I15+ ATCTGCTCGCAACACAGATGATTAGTGTGTATAATTTCAGAGCTCGGGGTTTTAC
JMSF043G21+ ATCTGCTCGCAACACAGATGATTAGTGTGTATAATTTCAGAGCTCGGGGTTTTACCCAAG
                      ____________________________________________________________
consensus ATCTGCTCGCAACACAGATGATTAGTGTGTATAATTTCAGAGCTCGGGGTTTTACCCAAG
 
. : . : . : . : . : . :
JMSF043G21+ GTTTCTTCGTGTGAATGTGTGATGAGGAGGGTTTGAGAACGAAAACAAATGTTTCGAATC
                      ____________________________________________________________
consensus GTTTCTTCGTGTGAATGTGTGATGAGGAGGGTTTGAGAACGAAAACAAATGTTTCGAATC