Contig 002409:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF002P06-                    AAAAAAACGAATACAGAAAATCAATTGTGTTTGTCTTTTAATTGAAAGAA
                      ____________________________________________________________
consensus                       AAAAAAACGAATACAGAAAATCAATTGTGTTTGTCTTTTAATTGAAAGAA
 
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rJMSF002P06-          TAAATCTATGATTAACAGCCATTTTTTAGAGTCCCAATTATTTGGGAAAGTGGTCAGTCG
                      ____________________________________________________________
consensus             TAAATCTATGATTAACAGCCATTTTTTAGAGTCCCAATTATTTGGGAAAGTGGTCAGTCG
 
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rJMSF002P06-          CCTTTCATATTAATGCGGTTGCCAACAATTTAATTGGGACTCTAATAAAGGAACAACTAT
                      ____________________________________________________________
consensus             CCTTTCATATTAATGCGGTTGCCAACAATTTAATTGGGACTCTAATAAAGGAACAACTAT
 
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rJMSF002P06-          TGAGTAATACAATACGATACAAATACAAATACAATTGATTTTACGATCTACATACAACGG
rJMSF014A21-                      TACGATACAAATACAAATACAATTGATTTTACGATCTACATACAACGG
                      ____________________________________________________________
consensus             TGAGTAATACAATACGATACAAATACAAATACAATTGATTTTACGATCTACATACAACGG
 
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rJMSF002P06-          ATACAACATATATATATGAAGTTGCAAATTAAATTTGCCCATGCGTCGTTTGTTCTTCCA
rJMSF014A21-          ATACAACATATATATATGAAGTTGCAAATTAAATTTGCCCATGCGTCGTTTGTTCTTCCA
                      ____________________________________________________________
consensus             ATACAACATATATATATGAAGTTGCAAATTAAATTTGCCCATGCGTCGTTTGTTCTTCCA
 
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rJMSF002P06-          ATGTGCAGTCTCATTTGGGAGGCAACCGAGAGATCATGGCTGATTTGAAACTTCTCACCA
rJMSF014A21-          ATGTGCAGTCTCATTTGGGAGGCAACCGAGAGATCATGGCTGATTTGAAACTTCTCACCA
                      ____________________________________________________________
consensus             ATGTGCAGTCTCATTTGGGAGGCAACCGAGAGATCATGGCTGATTTGAAACTTCTCACCA
 
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rJMSF002P06-          AGCCTGTATAAATACTTGGTACTAACTTCATAATTGTCTACCATTATTCTCTCCTTCAGT
rJMSF014A21-          AGCCTGTATAAATACTTGGTACTAACTTCATAATTGTCTACCATTATTCTCTCCTTCAGT
                      ____________________________________________________________
consensus             AGCCTGTATAAATACTTGGTACTAACTTCATAATTGTCTACCATTATTCTCTCCTTCAGT
 
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rJMSF002P06-          CTAAGTGATTCCTTCATCTTTCTTGGTTGCTTTCAAATTTCTGAATATCTACAAATGGCT
rJMSF014A21-          CTAAGTGATTCCTTCATCTTTCTTGGTTGCTTTCAAATTTCTGAATATCTACAAATGGCT
                      ____________________________________________________________
consensus             CTAAGTGATTCCTTCATCTTTCTTGGTTGCTTTCAAATTTCTGAATATCTACAAATGGCT
 
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rJMSF002P06-          CCTGTTTATATTCTAGGCAAAAACATCAAATTATCTACTTAC-AAAAAAGCTATCAGGCT
rJMSF014A21-          CCTGTTTATATTCTAGGCAAAAACATCAAATTATCTACTTACAAAAAAAGCTATCAGGCT
                      ____________________________________________________________
consensus             CCTGTTTATATTCTAGGCAAAAACATCAAATTATCTACTTACAAAAAAAGCTATCAGGCT
 
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rJMSF002P06-          ACGGTTGATTCGTACCTATACGGTACCCGAAGGTCGCAACAGTTCGGATAGCATCAAGAG
rJMSF014A21-          ACGGTTGATTCGTACCTATACGGTACCCGAAGGTCGCAACAGTTCGGATAGCATCAAGAG
                      ____________________________________________________________
consensus             ACGGTTGATTCGTACCTATACGGTACCCGAAGGTCGCAACAGTTCGGATAGCATCAAGAG
 
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rJMSF002P06-          TCAGGAATGTGTCTTTCATGACAGTGAGGTAAGTTCTCTTTCAATTTCAACAGGCCACTG
rJMSF014A21-          TCAGGAATGTGTCTTTCATGACAGTGAGGTAAGTTCTCTTTCAATTTCAACAGGCCACTG
                      ____________________________________________________________
consensus             TCAGGAATGTGTCTTTCATGACAGTGAGGTAAGTTCTCTTTCAATTTCAACAGGCCACTG
 
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rJMSF002P06-          TTTAATGCATTCAATTTTTCACTTTGATCAGTACTATAGTTACACCAGGCCACTGTTTAA
rJMSF014A21-          TTTAATGCATTCAATTTTTCACTTTGATCAGTACTATAGTTACACCAGGCCACTGTTTAA
                      ____________________________________________________________
consensus             TTTAATGCATTCAATTTTTCACTTTGATCAGTACTATAGTTACACCAGGCCACTGTTTAA
 
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rJMSF002P06-          GGCATCAATTATATCACTTTGAG                                     
rJMSF014A21-          AGCATCAATTATATCACTTTGAGGTGTAGGGTAGTTACACAATCTGTTTATTTAACTTTT
                      ____________________________________________________________
consensus             GGCATCAATTATATCACTTTGAGGTGTAGGGTAGTTACACAATCTGTTTATTTAACTTTT
 
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rJMSF014A21-          AGGGGCAATCATCTTAAGTGTACTGTTTGGGATCAACATGTTGATACGGCCATGCATTAT
                      ____________________________________________________________
consensus             AGGGGCAATCATCTTAAGTGTACTGTTTGGGATCAACATGTTGATACGGCCATGCATTAT
 
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rJMSF014A21-          TTCAAGACCCACGTGGAAGGTCCTTTGATTGTTTTACTCCAACTCTTGCACTATCAAGAC
JMSF043B07+                                                           CACTATCAAGAC
                      ____________________________________________________________
consensus             TTCAAGACCCACGTGGAAGGTCCTTTGATTGTTTTACTCCAACTCTTGCACTATCAAGAC
 
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rJMSF014A21-          GTACTTGATAGCCAACCAAAGAATCATATGAACCTGGTGAAGATTCAACTCG-CTCATCG
JMSF043B07+           GTACTTGATAGCCAACCAAAGAATCATATGAACCTGGTGAAGATTCAACTCGNTTCATCG
                      ____________________________________________________________
consensus             GTACTTGATAGCCAACCAAAGAATCATATGAACCTGGTGAAGATTCAACTCGNTTCATCG
 
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rJMSF014A21-          GCAACTCTTTCAGCTACAGAAACTACCT                                
JMSF043B07+           GCAACTCTTTCAGCTACAGAAACTACCTGAGTTGTTTTACCACAACCTGTTTCCCCACAA
                      ____________________________________________________________
consensus             GCAACTCTTTCAGCTACAGAAACTACCTGAGTTGTTTTACCACAACCTGTTTCCCCACAA
 
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JMSF043B07+           ACAACCAAAATATCATTCTTTTCAAGTGAATGCAAAATATCATCCTTTTAACTCAGCAAT
                      ____________________________________________________________
consensus             ACAACCAAAATATCATTCTTTTCAAGTGAATGCAAAATATCATCCTTTTAACTCAGCAAT
 
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JMSF014A21+                                          TAACATGAAANTTATAAATCAATTAGAAT
JMSF043B07+           AGGAAGGGAAGCTCTGGATTTCAACATGTCCTAACATGAAAATTATAAATCAATTAGAAT
                      ____________________________________________________________
consensus             AGGAAGGGAAGCTCTGGATTTCAACATGTCCTAACATGAAAATTATAAATCAATTAGAAT
 
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JMSF014A21+           TTAGAAGCAAAACATTAAAAGAAGTATGCATATGACTACATTCAGCATAACTGATAAAGC
JMSF043B07+           TTAGAAGCAAAACATTAAAAGAAGTATGCATATGACTACATTCAGCATAACTGATAAAGC
                      ____________________________________________________________
consensus             TTAGAAGCAAAACATTAAAAGAAGTATGCATATGACTACATTCAGCATAACTGATAAAGC
 
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JMSF002P06+                                                               CTAATACA
JMSF014A21+           ATATAGAGAAAGTAATGGCAATTTTAAAAAAATGCAATAATAAGACGCTGCTCTAATACA
JMSF043B07+           ATATAGAGAAAGTAATGGCAATTTTAAAAAAATGCAATAATAAGACGCTGCTCTAATACA
                      ____________________________________________________________
consensus             ATATAGAGAAAGTAATGGCAATTTTAAAAAAATGCAATAATAAGACGCTGCTCTAATACA
 
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JMSF002P06+           GCCTTGAGAGCTGGACAAGGTAGAAGACCGGAATCCCCTTGCTGGCCTTGCATAATGAGA
JMSF014A21+           GCCTTGAGAGCTGGACAAGGTAGAAGACCGGAATCCCCTTGCTGGCCTTGCATAATGAGA
JMSF043B07+           GCCTTGAGAGCTGGACAAGGTAGAAGACCGGAATCCCCTTGCTGGCCTTGCATAATGAGA
                      ____________________________________________________________
consensus             GCCTTGAGAGCTGGACAAGGTAGAAGACCGGAATCCCCTTGCTGGCCTTGCATAATGAGA
 
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JMSF002P06+           CTGCACAAAATTCCAACTGCCATCTACATACTTGACAATTAAGCTTCAAAGAACAGGTCC
JMSF014A21+           CTGCACAAAATTCCAACTGCCATCTACATACTTGACAATTAAGCTTCAAAGAACAGGTCC
JMSF008O14+                                                         CAAAGAACAGGTCC
JMSF043B07+           CTGCACAAAATTCCAACTGCCATCTACATACTTGACAATTAAGCTTCAAAGAACAGGTCC
                      ____________________________________________________________
consensus             CTGCACAAAATTCCAACTGCCATCTACATACTTGACAATTAAGCTTCAAAGAACAGGTCC
 
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JMSF002P06+           ACGGGATAGAATCTTCTCACTTTACTGTACCATGTTAATGGAGGAAAGAGGCGACGTCGG
JMSF014A21+           ACGGGATAGAATCTTCTCACTTTACTGTACCATGTTAATGGAGGAAAGAGGCGACGTCGG
JMSF008O14+           ACGGGATAGAATCTTCTCACTTTACTGTACCATGTTAATGGAGGAAAGAGGCGACGTCGG
JMSF043B07+           ACGGGATAGAATCTTCTCACTTTACTGTACCATGTTAATGGAGGAAAGAGGCGACGTCGG
                      ____________________________________________________________
consensus             ACGGGATAGAATCTTCTCACTTTACTGTACCATGTTAATGGAGGAAAGAGGCGACGTCGG
 
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JMSF002P06+           CAGACCGGGGAGGGAAGAGGCGACGGCTGGCAGAGGAAGGCGAATACAACGAGGGTGAGA
JMSF014A21+           CAGACCGGGGAGGGAAGAGGCGACGGCTGGCAGAGGAAGGCGAATACAACGAGGGTGAGA
JMSF008O14+           CAGACCGGGGAGGGAAGAGGCGACGGCTGGCAGAGGAAGGCGAATACAACGAGGGTGAGA
JMSF043B07+           CAGACCGGGGAGGGAAGAGGCGACGGCTGGCAGAGGAAGGCGAATACAACGAGGGTGAGA
                      ____________________________________________________________
consensus             CAGACCGGGGAGGGAAGAGGCGACGGCTGGCAGAGGAAGGCGAATACAACGAGGGTGAGA
 
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JMSF002P06+           TGGCAGCGGAGGTGTGAGACGGAGCGGCAGCGGTGAATCTAGACGGCAACAGAGGTGTGA
JMSF014A21+           TGGCAGCGGAGGTGTGAGACGGAGCGGCAGCGGTGAATCTAGACGGCAACAGAGGTGTGA
JMSF008O14+           TGGCAGCGGAGGTGTGAGACGGAGCGGCAGCGGTGAATCTAGACGGCAACAGAGGTGTGA
JMSF043B07+           TGGCAGCGGAGGTGTGAGACGGAGCGGCAGCGGTGAATCTAGACGGCAACAGAGGTGTGA
                      ____________________________________________________________
consensus             TGGCAGCGGAGGTGTGAGACGGAGCGGCAGCGGTGAATCTAGACGGCAACAGAGGTGTGA
 
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JMSF002P06+           GGTCTGAGGCT                                                 
JMSF014A21+           GGTCTGAGGCTTGAGTGTACGTCGACT                                 
JMSF008O14+           GGTCTGAGGCTTGAGTGTACGTCGACTGACAGCGAAACTAAAAAAAATTTGC        
JMSF043B07+           GGTCTGAGGCTTGAGTGTACGTCGACTGACAGCGAAACTAAAAAAAATTTGCTAAGTGCC
                      ____________________________________________________________
consensus             GGTCTGAGGCTTGAGTGTACGTCGACTGACAGCGAAACTAAAAAAAATTTGCTAAGTGCC