Contig 002408:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS042F10Sequence625002408 (5)ref|XP_006366676.1|155PREDICTED: peroxisome biogenesis protein 6-like [Solanum tuberosum]
JMFS140D02Sequence617002408 (5)ref|XP_006366676.1|157PREDICTED: peroxisome biogenesis protein 6-like [Solanum tuberosum]
JMFS149D09Sequence604002408 (5)ref|XP_006366676.1|147PREDICTED: peroxisome biogenesis protein 6-like [Solanum tuberosum]
JMSF007B09Sequence222002408 (5)798004368 (4)ref|XP_009768919.1|3e-120PREDICTED: peroxisome biogenesis protein 6 [Nicotiana sylvestris]
JMSF043A07Sequence759002408 (5)ref|XP_006366676.1|208PREDICTED: peroxisome biogenesis protein 6-like [Solanum tuberosum]683004368 (4)ref|XP_009768919.1|2e-84PREDICTED: peroxisome biogenesis protein 6 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF043A07+ CTAAGATGTTTTGCATACTTTGGCAACTGATCTAATGGT
                      ____________________________________________________________
consensus CTAAGATGTTTTGCATACTTTGGCAACTGATCTAATGGT
 
. : . : . : . : . : . :
JMSF043A07+ TCAATTCCTAGACTAATGACAGCACTTTCATTTCCACTTTCCACCTTGATGTCAAACAAA
                      ____________________________________________________________
consensus TCAATTCCTAGACTAATGACAGCACTTTCATTTCCACTTTCCACCTTGATGTCAAACAAA
 
. : . : . : . : . : . :
JMFS042F10+ CGATTTCAAACACGATATATGCAAATTA
JMFS149D09+ GATATATGCAAATTA
JMFS140D02+ CGATTTCAAACACGATATATGCAAATTA
JMSF043A07+ GGAGACAAAGTCTCGTTATTTTGGTGAATAACCGATTTCAAACACGATATATGCAAATTA
                      ____________________________________________________________
consensus GGAGACAAAGTCTCGTTATTTTGGTGAATAACCGATTTCAAACACGATATATGCAAATTA
 
. : . : . : . : . : . :
JMFS042F10+ AGGTTAAATGCCANAATTGGAGATAAATAGGCAGTTTCCTGATCTGTCTTGGGGGAATGA
JMFS149D09+ AGGTTAAATGCCAAAATTGGAGATAAATAGGCAGTTTCCTGATCTGTCTGGGGGGAATGA
JMFS140D02+ AGGTTAAATGCCAAAATTGGAGATAAATAGGCAGTTTCCTGATCTGTCTTGGGGGAATGA
JMSF043A07+ AGGTTAAATGCCAAAATTGGAGATAAATAGGCAGTTTCCTGATCTGTCTTGGGGGAATGA
                      ____________________________________________________________
consensus AGGTTAAATGCCAAAATTGGAGATAAATAGGCAGTTTCCTGATCTGTCTTGGGGGAATGA
 
. : . : . : . : . : . :
JMFS042F10+ ACATCACCATAACAATGTGATGGCAAAACAAGCATTGCCTGGGGAGATTCTGAGAGAAGT
JMFS149D09+ ACATCACCATAACAATGTGATGGCAAAACAAGCATTGCCTGGGGAGATTCTGAGAGAAGT
JMFS140D02+ ACATCACCATAACAATGTGATGGCAAAACAAGCATTGCCTGGGGAGATTCTGAGAGAAGT
JMSF043A07+ ACATCACCATAACAATGTGATGGCAAAACAAGCATTGCCTGGGGAGATTCTGAGAGAAGT
                      ____________________________________________________________
consensus ACATCACCATAACAATGTGATGGCAAAACAAGCATTGCCTGGGGAGATTCTGAGAGAAGT
 
. : . : . : . : . : . :
JMFS042F10+ GGTGTGCTACTGGGCAATGTCTTATCAGTATGGGGAGGATCCAGAACTATTACTTGCCCA
JMFS149D09+ GGTGTGCTACTGGGCAATGTCTTATCAGTATGGGGAGGATCCAGAACTATTACTTGCCCA
JMFS140D02+ GGTGTGCTACTGGGCAATGTCTTATCAGTATGGGGAGGATCCAGAACTATTACTTGCCCA
JMSF043A07+ GGTGTGCTACTGGGCAATGTCTTATCAGTATGGGGAGGATCCAGAACTATTACTTGCCCA
                      ____________________________________________________________
consensus GGTGTGCTACTGGGCAATGTCTTATCAGTATGGGGAGGATCCAGAACTATTACTTGCCCA
 
. : . : . : . : . : . :
JMFS042F10+ ATTCTTAGCCCACTCATGTCAACATTCTTTATCAGTACCAGTGACCCGGAAGTTATGGAG
JMFS149D09+ ATTCTTAGCCCACTCATGTCAACATTCTTTATCAGTACCAGTGACCCGGAAGTTATGGAG
JMFS140D02+ ATTCTTAGCCCACTCATGTCAACATTCTTTATCAGTACCAGTGACCCGGAAGTTATGGAG
JMSF043A07+ ATTCTTAGCCCACTCATGTCAACATTCTTTATCAGTACCAGTGACCCGGAAGTTATGGAG
                      ____________________________________________________________
consensus ATTCTTAGCCCACTCATGTCAACATTCTTTATCAGTACCAGTGACCCGGAAGTTATGGAG
 
. : . : . : . : . : . :
JMFS042F10+ AGTCTTTTGAGAGAAGAAGTGGAAAGGCCGACCATGGTGGAACAGTCAAGAGAAGACCCT
JMFS149D09+ AGTCTTTTGAGAGAAGAAGTGGAAAGGCCGACCATGGTGGAACAGTCAAGAGAAGACCCT
JMFS140D02+ AGTCTTTTGAGAGAAGAAGTGGAAAGGCCGACCATGGTGGAACAGTCAAGAGAAGACCCT
JMSF043A07+ AGTCTTTTGAGAGAAGAAGTGGAAAGGCCGACCATGGTGGAACAGTCAAGAGAAGACCCT
                      ____________________________________________________________
consensus AGTCTTTTGAGAGAAGAAGTGGAAAGGCCGACCATGGTGGAACAGTCAAGAGAAGACCCT
 
. : . : . : . : . : . :
JMFS042F10+ GCCTTCGCGGGTGAAATTCCATTTAGGTCCTTGGGCAATTGGAGAATTCCTGCTCTTAAC
JMFS149D09+ GCCTTCGCGGGTGAAATTCCATTTAGGTCCTTGGGCAATTGGAGAATTCCTGCTCTTAAC
JMFS140D02+ GCCTTCGCGGGTGAAATTCCATTTAGGTCCTTGGGCAATTGGAGAATTCCTGCTCTTAAC
JMSF007B09+ CTGCTCTTAAC
JMSF043A07+ GCCTTCGCGGGTGAAATTCCATTTAGGTCCTTGGGCAATTGGAGAATTCCTGCTCTTAAC
                      ____________________________________________________________
consensus GCCTTCGCGGGTGAAATTCCATTTAGGTCCTTGGGCAATTGGAGAATTCCTGCTCTTAAC
 
. : . : . : . : . : . :
JMFS042F10+ TGTATACTAGAATTTGTCAGGGACGAAGAGGAAAGGGGCTTAATTGGCTCTGTGAGCTTA
JMFS149D09+ TGTATACTAGAATTTGTCAGGGACGAAGAGGAAAGGGGCTTAATTGGCTCTGTGAGCTTA
JMFS140D02+ TGTATACTAGAATTTGTCAGGGACGAAGAGGAAAGGGGCTTAATTGGCTCTGTGAGCTTA
JMSF007B09+ TGTATACTAGAATTTGTCAGGGACGAAGAGGAAAGGGGCTTAATTGGCTCTGTGAGCTTA
JMSF043A07+ TGTATACTAGAATTTGTCAGGGACGAAGAGGAAAGGGGCTTAATTGGCTCTGTGAGCTTA
                      ____________________________________________________________
consensus TGTATACTAGAATTTGTCAGGGACGAAGAGGAAAGGGGCTTAATTGGCTCTGTGAGCTTA
 
. : . : . : . : . : . :
JMFS042F10+ TGTTCATCGTTGAGAATGGAGGTGAGGTGAGCTTTGGTGGAGGAAAGTATCAAAGGCTTT
JMFS149D09+ TGTTCATCGTTGAGAATGGAGGTGAGGTGAGCTTTGGTGGAGGAAAGTATCAAAGGCTTT
JMFS140D02+ TGTTCATCGTTGAGAATGGAGGTGAGGTGAGCTTTGGTGGAGGAAAGTATCAAAGGCTTT
JMSF007B09+ TGTTCATCGTTGAGAATGGAGGTGAGGTGAGCTTTGGTGGAGGAAAGTATCAAAGGCTTT
JMSF043A07+ TGTTCATCGTTGAGAATGGAGGTGAGGTGAGCTTTGGTGGAGGAAAGTATCAAAGGCTTT
                      ____________________________________________________________
consensus TGTTCATCGTTGAGAATGGAGGTGAGGTGAGCTTTGGTGGAGGAAAGTATCAAAGGCTTT
 
. : . : . : . : . : . :
JMFS042F10+ CTTTTCCTCGCCATCCTCACCGTCGAAATCTATCAGCTTTGCTTCAATCGGCAGTTGAAC
JMFS149D09+ CTTTTCCTCGCCATCCTCACCGTCGAAATCTATCAGCTTTGCTTCAATCGGCAGTTGAAC
JMFS140D02+ CTTTTCCTCGCCATCCTCACCGTCGAAATCTATCAGCTTTGCTTCAATCGGCAGTTGAAC
JMSF007B09+ CTTTTCCTCGCCATCCTCACCGTCGAAATCTATCAGCTTTGCTTCAATCGGCAGTTGAAC
JMSF043A07+ CTTTTCCTCGCCATCCTCACCGTCGAAATCTATCAGCTTTGCTTCAATCGGCAGTTGAAC
                      ____________________________________________________________
consensus CTTTTCCTCGCCATCCTCACCGTCGAAATCTATCAGCTTTGCTTCAATCGGCAGTTGAAC
 
. : . : . : . : . : . :
JMFS042F10+ ACGGCGGCGGTTGGTTGGTTGGCCGGAACTCTGAATTCAGCAAAATCAAGAAACGTC
JMFS149D09+ ACGGCGGCGGTTGGTTGGTTGGCCGGAACTCTGAATTCAGCAAAATCAA
JMFS140D02+ ACGGCGGCGGTTGGTTGGTTGGCCGGAACTCTGAATTCAGCAAAATCAA
JMSF007B09+ ACGGCGGCGGTTGGTTGGTTGGCCGGAACTC
JMSF043A07+ ACGGCGGCGGTTGGTTGGTTGGCCGGAACTCTGAATTCAGCAAAATCAAGAAACGTCTTC
                      ____________________________________________________________
consensus ACGGCGGCGGTTGGTTGGTTGGCCGGAACTCTGAATTCAGCAAAATCAAGAAACGTCTTC