Contig 002398:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF041H06Sequence585002398 (2)ref|XP_007213994.1|8e-34hypothetical protein PRUPE_ppa014087mg [Prunus persica] gb|EMJ15193.1| hypotheti539002398 (2)ref|XP_007213994.1|5e-34hypothetical protein PRUPE_ppa014087mg [Prunus persica] gb|EMJ15193.1| hypotheti

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF041H06+ GGTATAATTAATTTAAGCTTGAGATCGATCGATCAGAGTTGAAGA
JMSF041H06- GGTATAATTAATTTAAGCTTGAGATCGATCGATCAGAGTTGAAGA
                      ____________________________________________________________
consensus GGTATAATTAATTTAAGCTTGAGATCGATCGATCAGAGTTGAAGA
 
. : . : . : . : . : . :
rJMSF041H06+ TGGTTTGCTTTTGCTTCTTGGTGGACCAGAAGAGGAAGGTGAGGAGAAGTAAGCCGGTGG
JMSF041H06- TGGTTTGCTTTTGCTTCTTGGTGGACCAGAAGAGGAAGGTGAGGAGAAGTAAGCCGGTGG
                      ____________________________________________________________
consensus TGGTTTGCTTTTGCTTCTTGGTGGACCAGAAGAGGAAGGTGAGGAGAAGTAAGCCGGTGG
 
. : . : . : . : . : . :
rJMSF041H06+ CGGGTTCGTGTTCCCGGTGCGGCCGTAGCGCCGCCGTTGCCGATATGACAACCGCCACCA
JMSF041H06- CGGGTTCGTGTTCCCGGTGCGGCCGTAGCGCCGCCGTTGCCGATATGACAACCGCCACCA
                      ____________________________________________________________
consensus CGGGTTCGTGTTCCCGGTGCGGCCGTAGCGCCGCCGTTGCCGATATGACAACCGCCACCA
 
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rJMSF041H06+ GGTTCTGTTACGTCCCATTTTACTACAAGTCTTGGAAGGCCATCGTCTGCACTTTCTGTG
JMSF041H06- GGTTCTGTTACGTCCCATTTTACTACAAGTCTTGGAAGGCCATCGTCTGCACTTTCTGTG
                      ____________________________________________________________
consensus GGTTCTGTTACGTCCCATTTTACTACAAGTCTTGGAAGGCCATCGTCTGCACTTTCTGTG
 
. : . : . : . : . : . :
rJMSF041H06+ GATCCATTCTCAAATCTTACACATGACATCATAAATACTATATATACACAAATCAGATCA
JMSF041H06- GATCCATTCTCAAATCTTACACATGACATCATAAATACTATATATACACAAATCAGATCA
                      ____________________________________________________________
consensus GATCCATTCTCAAATCTTACACATGACATCATAAATACTATATATACACAAATCAGATCA
 
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rJMSF041H06+ TCATCAGACCACGTAAGTTAACAATTATATATATTCAACCACTCACTTATTAGCTCATCG
JMSF041H06- TCATCAGACCACGTAAGTTAACAATTATATATATTCAACCACTCACTTATTAGCTCATCG
                      ____________________________________________________________
consensus TCATCAGACCACGTAAGTTAACAATTATATATATTCAACCACTCACTTATTAGCTCATCG
 
. : . : . : . : . : . :
rJMSF041H06+ CTATCTAACTGTAATGTATTGTACTGTTAAGTGTTTAATATATCAATGCAGAGCTAGCTG
JMSF041H06- CTATCTAACTGTAATGTATTGTACTGTTAAGTGTTTAATATATCAATGCAGAGCTAGCTG
                      ____________________________________________________________
consensus CTATCTAACTGTAATGTATTGTACTGTTAAGTGTTTAATATATCAATGCAGAGCTAGCTG
 
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rJMSF041H06+ GAAGCTAAGTTATATGGTTCTTCAGTTTCTCAGCTCTGTACTTTTGTACGTGATGAATAT
JMSF041H06- GAAGCTAAGTTATATGGTTCTTCAGTTTCTCAGCTCTGTACTTTTGTACGTGATGAATAT
                      ____________________________________________________________
consensus GAAGCTAAGTTATATGGTTCTTCAGTTTCTCAGCTCTGTACTTTTGTACGTGATGAATAT
 
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rJMSF041H06+ CTACATGATGTAAATGATATATGATGGAGAATTTTCTATGTACTAATTGTTAATATCAAT
JMSF041H06- CTACATGATGTAAATGATATATGATGGAGAATTTTCTATGTACTAATTGTTAATATCAAT
                      ____________________________________________________________
consensus CTACATGATGTAAATGATATATGATGGAGAATTTTCTATGTACTAATTGTTAATATCAAT
 
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rJMSF041H06+ TTTATGATGGCAAT
JMSF041H06- TTTATGATGGCAATATATTTTAGCTAAACATATATATAGAATTTGGAAATAAAAAAAAAA
                      ____________________________________________________________
consensus TTTATGATGGCAATATATTTTAGCTAAACATATATATAGAATTTGGAAATAAAAAAAAAA