Contig 002383:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047P17Sequence643002383 (3)ref|XP_009611354.1|4e-73PREDICTED: lecithin-cholesterol acyltransferase-like 4 [Nicotiana tomentosiform608010050 (3)ref|XP_009781258.1|3e-65PREDICTED: lecithin-cholesterol acyltransferase-like 4 [Nicotiana sylvestris]
JMSF039M15Sequence639002383 (3)ref|XP_009611354.1|4e-67PREDICTED: lecithin-cholesterol acyltransferase-like 4 [Nicotiana tomentosiform856010050 (3)ref|XP_009781258.1|1e-92PREDICTED: lecithin-cholesterol acyltransferase-like 4 [Nicotiana sylvestris]
JMSF039P06Sequence642002383 (3)ref|XP_009611354.1|1e-75PREDICTED: lecithin-cholesterol acyltransferase-like 4 [Nicotiana tomentosiform821010050 (3)ref|XP_009781258.1|4e-94PREDICTED: lecithin-cholesterol acyltransferase-like 4 [Nicotiana sylvestris]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047P17+                                                           ACCAAACCCAAA
JMSF039P06+                                                                    AAA
                      ____________________________________________________________
consensus                                                             ACCAAACCCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047P17+           AGTGTTGTTCCCTCTTGGTAGCCCCACATGAGCATNTCAGCTATCATATCATGGAAATAA
JMSF039P06+           AGTGTTGTTCCCTCTTGGTAGCCCCACATGAGCATTTCAGCTATCATATCATGGAAATAA
JMSF039M15+                                CCCCACATGAGCATTTCAGCTATCATATCATGGAAATAA
                      ____________________________________________________________
consensus             AGTGTTGTTCCCTCTTGGTAGCCCCACATGAGCATTTCAGCTATCATATCATGGAAATAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047P17+           TATACACTGTCGCGTCCAATAATCATATCAGGATCCAAAGAATCAATGGCGTATAACCCA
JMSF039P06+           TATACACTGTCGCGTCCAATAATCATATCAGGGTCCAAAGAATCAATGGCGTATAACCCA
JMSF039M15+           TATACACTGTCGCGCCCAATAATCATATCAGGATCCAAAGAATCAATGGCGTATAACCCA
                      ____________________________________________________________
consensus             TATACACTGTCGCGTCCAATAATCATATCAGGATCCAAAGAATCAATGGCGTATAACCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047P17+           TATCTGTCTTCAGGAACCTCAATACTCGTATCAGGGTCTAAAGTCACTGCTTTACCCGTG
JMSF039P06+           TATCTGTCTTCAGGAACCTCAATACTCGTATCAGGGTCTAAAGTCACTGCTTTACCCGTG
JMSF039M15+           TATCTGTCTTCAGGAACCTCAATACTCGTATCAGGGTCTAAAGTCACTGCTTTACCCGTG
                      ____________________________________________________________
consensus             TATCTGTCTTCAGGAACCTCAATACTCGTATCAGGGTCTAAAGTCACTGCTTTACCCGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047P17+           GAAGAGTCGAAGCGAGACCAGAGCTTATCACAGAACTCATGGTCGGCGCCAAGGATCCGG
JMSF039P06+           GAAGAGTCGAAGCGAGACCAGAGCTTATCACAGAACTCATGGTCGGCGCCAAGGATCCGG
JMSF039M15+           GAAGAGTCGAAGCGAGACCAGAGCTTATCACAGAACTCATGGTCGGCGCCAAGGATCCGG
                      ____________________________________________________________
consensus             GAAGAGTCGAAGCGAGACCAGAGCTTATCACAGAACTCATGGTCGGCGCCAAGGATCCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047P17+           ACCCAAACCCGTTCAGATTTACCAGTTTTATTATTGACGGCGTTGATAATTGAACCGGCT
JMSF039P06+           ACCCAAACCCGTTCAGATTTACCAGTTTTATTATTGACGGCGTTGATAATTGAACCGGCT
JMSF039M15+           ACCCAAACCCGTTCAGATTTACCAGTTTTATTATTGACGGCGTTGATAATTGAACCGGCT
                      ____________________________________________________________
consensus             ACCCAAACCCGTTCAGATTTACCAGTTTTATTATTGACGGCGTTGATAATTGAACCGGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047P17+           ATTCCAGGAACCAGAAGCACCGGGTCGAGCGTAGGGTCAACAAAAGTCTGCGTCTCCTTG
JMSF039P06+           ATTCCAGGAACCAGAAGCACCGGGTCGAGCGTAGGGTCAACAAAAGTCTGCGTCTCCTTG
JMSF039M15+           ATTCCAGGAACCAGAAGCACCGGGTCGAGCGTAGGGTCAACAAAAGTCTGCGTCTCCTTG
                      ____________________________________________________________
consensus             ATTCCAGGAACCAGAAGCACCGGGTCGAGCGTAGGGTCAACAAAAGTCTGCGTCTCCTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047P17+           ATCAGCCCTAACCATAGCTCCAATGACTTCACTATCTCCTCTAACAACGCCATCAAAATT
JMSF039P06+           ATCAGCCCTAACCATAGCTCCAATGACTTCACTATCTCCTCTAACAACGCCATCAAAATT
JMSF039M15+           ATCAGCCCTAACCATAGCTCCAATGACTTCACTATCTCCTCTAACAACGCCATCAAAATT
                      ____________________________________________________________
consensus             ATCAGCCCTAACCATAGCTCCAATGACTTCACTATCTCCTCTAACAACGCCATCAAAATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047P17+           ACAGATTTTCTCCCTACAAGTATATGTATTTCAGGAGATTTGAAGGGGATTTAGGGAATT
JMSF039P06+           ACAGATTTTCTCCCTACAAGTATATGTATTTCAGGAGATTTGAAGGGGATTTAGGGAATT
JMSF039M15+           ACAGATTTTCTCCCTACAAGTATATGTATTTCAGGAGATTTGAAGGGGATTTAGGGAATT
                      ____________________________________________________________
consensus             ACAGATTTTCTCCCTACAAGTATATGTATTTCAGGAGATTTGAAGGGGATTTAGGGAATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047P17+           AAGAGGAAGAAGATGGGGGAGTGGAGGCTTTCGGAGGCGCGGCGGCTGGGTAGGTGGCTT
JMSF039P06+           AAGAGGAAGAAGATGGGGGAGTGGAGGCTTTTGGAGGCGCGGCGGCTGGGTAGGTGGCTT
JMSF039M15+           AAGAGGAAGAAGATGGGGGAGTGGAGGCTTTTGGAGGCGCGGCGGCTGGGTAGGTGGCTT
                      ____________________________________________________________
consensus             AAGAGGAAGAAGATGGGGGAGTGGAGGCTTTTGGAGGCGCGGCGGCTGGGTAGGTGGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047P17+           TGAAGGAGGGAAACGGTGGCGAGTGGTTGCAGTGAAGAGCCGTGGAATTAACGGAAAGTA
JMSF039P06+           TGAAGGAGGGAAACGGTGGCGAGTGGTTGCAGTGAAGAGCCGTGGAATTAACGGAAAGTA
JMSF039M15+           TGAAGGAGGGAAACGGTGGCGAGTGGTTGCAGTGAAGAGCCGTGGAATTAACGGAAAGTA
                      ____________________________________________________________
consensus             TGAAGGAGGGAAACGGTGGCGAGTGGTTGCAGTGAAGAGCCGTGGAATTAACGGAAAGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047P17+           TTGCAGCCTCCTGCGGCAGTTCAATTACCTT                             
JMSF039P06+           TTGCAGCCTCCTGCGGCAGTTCAATTACCTT                             
JMSF039M15+           TTGCAGCCTCCTGCGGCAGTTCAATTACCTTAGGCCTTAGCTACCAACGAGTTGTGGCCC
                      ____________________________________________________________
consensus             TTGCAGCCTCCTGCGGCAGTTCAATTACCTTAGGCCTTAGCTACCAACGAGTTGTGGCCC