Contig 002379:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007A23Sequence611002379 (13)ref|XP_009611798.1|2e-71PREDICTED: 40S ribosomal protein S15 [Nicotiana tomentosiformis]
JMFF014L16Sequence530002379 (13)gb|ADR71251.1|1e-7140S ribosomal protein S15D [Hevea brasiliensis]666002379 (13)gb|ADR71251.1|6e-7140S ribosomal protein S15D [Hevea brasiliensis]
JMFF031C11Sequence614002379 (13)ref|XP_009611798.1|2e-71PREDICTED: 40S ribosomal protein S15 [Nicotiana tomentosiformis]680002379 (13)ref|XP_009611798.1|5e-71PREDICTED: 40S ribosomal protein S15 [Nicotiana tomentosiformis]
JMFF041F16Sequence659002379 (13)ref|XP_009611798.1|4e-71PREDICTED: 40S ribosomal protein S15 [Nicotiana tomentosiformis]610002379 (13)ref|XP_010069156.1|9e-66PREDICTED: 40S ribosomal protein S15-4-like [Eucalyptus grandis]
JMFN016E11Sequence637002379 (13)ref|XP_009611798.1|5e-71PREDICTED: 40S ribosomal protein S15 [Nicotiana tomentosiformis]
JMFN016L17Sequence592002379 (13)gb|ADR71251.1|3e-7140S ribosomal protein S15D [Hevea brasiliensis]
JMFN018P20Sequence620002379 (13)ref|XP_009611798.1|3e-71PREDICTED: 40S ribosomal protein S15 [Nicotiana tomentosiformis]
JMFN028L21Sequence626002379 (13)ref|XP_009611798.1|1e-70PREDICTED: 40S ribosomal protein S15 [Nicotiana tomentosiformis]
JMFN030F03Sequence515002379 (13)ref|XP_004241029.1|6e-46PREDICTED: 40S ribosomal protein S15 [Solanum lycopersicum]
JMSF039A18Sequence613002379 (13)ref|XP_009611798.1|5e-69PREDICTED: 40S ribosomal protein S15 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN030F03- GATAAAAACTTGAGAGATT
                      ____________________________________________________________
consensus GATAAAAACTTGAGAGATT
 
. : . : . : . : . : . :
JMFN030F03- TGGAAAATGCATAGTACAAAACCAATTTGATAGAACACAAGTAATAGATCCACTGTGCTC
rJMFF031C11- AGTAATAGATCCACTGTGCTC
                      ____________________________________________________________
consensus TGGAAAATGCATAGTACAAAACCAATTTGATAGAACACAAGTAATAGATCCACTGTGCTC
 
. : . : . : . : . : . :
JMFN030F03- ACTCATCAGCAATACCTAAGAACATAAACTAAAAAAGGGTTCTCATTTCTCACATTCATA
JMFF041F16+ ACTCATCAGCAATAGCTAAGAACATAAACTAAAAAAGGGTTCTCATTTCTCACATTCATA
JMFN016E11+ CATCAGCAATAGCTAAGAACATAAACTAAAAAAGGGTTCTCATTTCTCACATTCATA
JMFN018P20+ TAAGAACATAAACTAAANAAGGGTTCTCATTTCTCACATTCATA
JMFN028L21+ TAGCTAAGNACATAAACTAAAAGAGGGTTCTCATTTCTCACATTCATA
rJMFF031C11- ACTCATCAGCAATAGCTAAGAACATAAACTAAAAAAGGGTTCTCATTTCTCACATTCATA
JMFF007A23+ CTCACATTCATA
JMFN016L17+ CATTCATA
JMFF031C11+ TTTCTCACATTCATA
JMSF039A18+ TCTCACATTCATA
                      ____________________________________________________________
consensus ACTCATCAGCAATAGCTAAGAACATAAACTAAAAAAGGGTTCTCATTTCTCACATTCATA
 
. : . : . : . : . : . :
JMFN030F03- ATATTACTTGAAACTGCAATAAATGTTACTGCTAAGATCCCTAAGAAAGCACTTGGGGAA
JMFF041F16+ ATATTCATTGAAACTGCAATAAATGTTACTGCTAAGATCCCTAAGAAAGCACTTGGGGAA
JMFN016E11+ ATATTCATTGAAACTGCAATAAATGTTACTGCTAAGATCCCTAAGAAAGCACTTGGGGAA
JMFN018P20+ ATATTCATTGAAACTGCAATAAATGTTACTGCTAAGATCCCTAAGAAAGCACTTGGGGAA
JMFN028L21+ ATATTCA-TGAAACTGCAATAAATGTTACTGCTAAGATCCCTAAGAAAGCACTTGGGGAA
rJMFF031C11- ATATTCATTGAAACTGCAATAAATGTTACTGCTAAGATCCCTAAGAAAGCACTTGGGGAA
JMFF007A23+ ATATTCATTGAAACTGCAATAAATGTTACTGCTAAGATCCCTAAGAAAGCACTTGGGGAA
JMFN016L17+ ATATTCATTGAAACTGCAATAAATGTTACTGCTAAGATCCCTAAGAAAGCACTTGGGGAA
JMFF014L16+ CTAAGAAAGCACTTGGGGAA
JMFF031C11+ ATATTCATTGAAACTGCAATAAATGTTACTGCTAAGATCCCTAAGAAAGCACTTGGGGAA
JMSF039A18+ ATATTCATTGAAACTGCAATAAATGTTACTGCTAAGATCCCTAAGAAAGCACTTGGGGAA
                      ____________________________________________________________
consensus ATATTCATTGAAACTGCAATAAATGTTACTGCTAAGATCCCTAAGAAAGCACTTGGGGAA
 
. : . : . : . : . : . :
JMFN030F03- TGGTAGGTGCATCACTTGAGTGGAATGAACCTCGAAGAGTGAGTAGCACCAATACCGGGC
JMFF041F16+ TGGTAGGTGCATCACTTGAGTGGAATGAACCTCGAAGAGTGAGTAGCACCAATACCGGGC
JMFN016E11+ TGGTAGGTGCATCACTTGAGTGGAATGAACCTCGAAGAGTGAGTAGCACCAATACCGGGC
JMFN018P20+ TGGTAGGTGCATCACTTGAGTGGAATGAACCTCGAAGAGTGAGTAGCACCAATACCGGGC
JMFN028L21+ TGGTAGGTGCATCACTTGAGTGGAATGAACCTCGAAGAGTGAGTAGCACCAATACCGGGC
rJMFF031C11- TGGTAGGTGCATCACTTGAGTGGAATGAACCTCGAAGAGTGAGTAGCACCAATACCGGGC
JMFF007A23+ TGGTAGGTGCATCACTTGAGTGGAATGAACCTCGAAGAGTGAGTAGCACCAATACCGGGC
JMFN016L17+ TGGTAGGTGCATCACTTGAGTGGAATGAACCTCGAAGAGTGAGTAGCACCAATACCGGGC
JMFF014L16+ TGGTAGGTGCATCACTTGAGTGGAATGAACCTCGAAGAGTGAGTAGCACCAATACCGGGC
rJMFF014L16- TGCATCACTTGAGTGGAATGAACCTCGAAGAGTGAGTAGCACCAATACCGGGC
rJMFF041F16- TGCATCACTTGAGTGGAATGAACCTCGAAGAGTGAGTAGCACCAATACCGGGC
JMFF031C11+ TGGTAGGTGCATCACTTGAGTGGAATGAACCTCGAAGAGTGAGTAGCACCAATACCGGGC
JMSF039A18+ TGGTAGGTGCATCACTTGAGTGGAATGAACCTCGAAGAGTGAGTAGCACCAATACCGGGC
                      ____________________________________________________________
consensus TGGTAGGTGCATCACTTGAGTGGAATGAACCTCGAAGAGTGAGTAGCACCAATACCGGGC
 
. : . : . : . : . : . :
JMFN030F03- CTACCGTGCTTGACAGGCTTGTATGAAATTGAGAACTCAGCTAAGTAGTGCCCAATCATC
JMFF041F16+ CTACCGTGCTTGACAGGCTTGTATGAAATTGAGAACTCAGCTAAGTAGTGCCCAATCATC
JMFN016E11+ CTACCGTGCTTGACAGGCTTGTATGAAATTGAGAACTCAGCTAAGTAGTGCCCAATCATC
JMFN018P20+ CTACCGTGCTTGACAGGCTTGTATGAAATTGAGAACTCAGCTAAGTAGTGCCCAATCATC
JMFN028L21+ CTACCGTGCTTGACAGGCTTGTATGAAATTGAGAACTCAGCTAAGTAGTGCCCAATCATC
rJMFF031C11- CTACCGTGCTTGACAGGCTTGTATGAAATTGAGAACTCAGCTAAGTAGTGCCCAATCATC
JMFF007A23+ CTACCGTGCTTGACAGGCTTGTATGAAATTGAGAACTCAGCTAAGTAGTGCCCAATCATC
JMFN016L17+ CTACCGTGCTTGACAGGCTTGTATGAAATTGAGAACTCAGCTAAGTAGTGCCCAATCATC
JMFF014L16+ CTACCGTGCTTGACAGGCTTGTATGAAATTGAGAACTCAGCTAAGTAGTGCCCAATCATC
rJMFF014L16- CTACCGTGCTTGACAGGCTTGTATGAAATTGAGAACTCAGCTAAGTAGTGCCCAATCATC
rJMFF041F16- CTACCGTGCTTGACAGGCTTGTATGAAATTGAGAACTCAGCTAAGTAGTGCCCAATCATC
JMFF031C11+ CTACCGTGCTTGACAGGCTTGTATGAAATTGAGAACTCAGCTAAGTAGTGCCCAATCATC
JMSF039A18+ CTACCGTGCTTGACAGGCTTGTATGAAATTGAGAACTCAGNTAAGTAGTGCCCAATCATC
                      ____________________________________________________________
consensus CTACCGTGCTTGACAGGCTTGTATGAAATTGAGAACTCAGCTAAGTAGTGCCCAATCATC
 
. : . : . : . : . : . :
JMFN030F03- TCTGGCTTAACCTCAATCTGGTTGAAGGTTTTTCCATTGTAAACACCGATGACACTTCCA
JMFF041F16+ TCTGGCTTAACCTCAATCTGGTTGAAGGTTTTTCCATTGTAAACACCGATGACACTTCCA
JMFN016E11+ TCTGGCTTAACCTCAATCTGGTTGAAGGTTTTTCCATTGTAAACACCGATGACACTTCCA
JMFN018P20+ TCTGGCTTAACCTCAATCTGGTTGAAGGTTTTTCCATTGTAAACACCGATGACACTTCCA
JMFN028L21+ TGTGGCTTAACCTCAATCTGGTTGAAGGTTTTTCCATTGTAAACACCGATGACACTTCCA
rJMFF031C11- TCTGGCTTAACCTCAATCTGGTTGAAGGTTTTTCCATTGTAAACACCGATGACACTTCCA
JMFF007A23+ TCTGGCTTAACCTCAATCTGGTTGAAGGTTTTTCCATTGTAAACACCGATGACACTTCCA
JMFN016L17+ TCTGGCTTAACCTCAATCTGGTTGAAGGTTTTTCCATTGTAAACACCGATGACACTTCCA
JMFF014L16+ TCTGGCTTAACCTCAATCTGGTTGAAGGTTTTTCCATTGTAAACACCGATGACACTTCCA
rJMFF014L16- TCTGGCTTAACCTCAATCTGGTTGAAGGTTTTTCCATTGTAAACACCGATGACACTTCCA
rJMFF041F16- TCTGGCTTAACCTCAATCTGGTTGAAGGTTTTTCCATTGTAAACACCGATGACACTTCCA
JMFF031C11+ TCTGGCTTAACCTCAATCTGGTTGAAGGTTTTTCCATTGTAAACACCGATGACACTTCCA
JMSF039A18+ TCTGGCTTAACCTCAATCTGGTTGAAGGTTTTTCCATTGTAAACACCGATGACACTTCCA
                      ____________________________________________________________
consensus TCTGGCTTAACCTCAATCTGGTTGAAGGTTTTTCCATTGTAAACACCGATGACACTTCCA
 
. : . : . : . : . : . :
JMFN030F03- ATCATCTCGGGAACAATAATCATGTTCCTAAGGTGAGTCTTGACAGGCTCCGGCTTCTCA
JMFF041F16+ ATCATCTCGGGAACAATAATCATGTTCCTAAGGTGAGTCTTGACAGGCTCCGGCTTCTCA
JMFN016E11+ ATCATCTCGGGAACAATAATCATGTTCCTAAGGTGAGTCTTGACAGGCTCCGGCTTCTCA
JMFN018P20+ ATCATCTCGGGAACAATAATCATGTTCCTAAGGTGAGTCTTGACAGGCTCCGGCTTCTCA
JMFN028L21+ ATCATCTCGGGAACAATAATCATGTTCCTAAGGTGAGTCTTGACAGGCTCCGGCTTCTCA
rJMFF031C11- ATCATCTCGGGAACAATAATCATGTTCCTAAGGTGAGTCTTGACAGGCTCCGGCTTCTCA
JMFF007A23+ ATCATCTCGGGAACAATAATCATGTTCCTAAGGTGAGTCTTGACAGGCTCCGGCTTCTCA
JMFN016L17+ ATCATCTCGGGAACAATAATCATGTTCCTAAGGTGAGTCTTGACAGGCTCCGGCTTCTCA
JMFF014L16+ ATCATCTCGGGAACAATAATCATGTTCCTAAGGTGAGTCTTGACAGGCTCCGGCTTCTCA
rJMFF014L16- ATCATCTCGGGAACAATAATCATGTTCCTAAGGTGAGTCTTGACAGGCTCCGGCTTCTCA
rJMFF041F16- ATCATCTCGGGAACAATAATCATGTTCCTAAGGTGAGTCTTGACAGGCTCCGGCTTCTCA
JMFF031C11+ ATCATCTCGGGAACAATAATCATGTTCCTAAGGTGAGTCTTGACAGGCTCCGGCTTCTCA
JMSF039A18+ ATCATCTCGGGAACAATAATCATGTTCCTAAGGTGAGTCTTGACAGGCTCCGGCTTCTCA
                      ____________________________________________________________
consensus ATCATCTCGGGAACAATAATCATGTTCCTAAGGTGAGTCTTGACAGGCTCCGGCTTCTCA
 
. : . : . : . : . : . :
JMFN030F03- CCAAGTGGGGCCTCACGTTTCGCCTTGCGGAGTTTCTTAATCAGCGCCAATGGCTTCCTC
JMFF041F16+ CCAGGTGGGGCCTCACGTTTCGCCTTGCGGAGTTTCTTAATCAGCGCCAATGGCTTCCTC
JMFN016E11+ CCAGGTGGGGCCTCACGTTTTGCCTTGCGGAGTTTCTTAATCAGCGCCAATGGCTTCCTC
JMFN018P20+ CCAGGTGGGGCCTCACGTTTCGCCTTGCGGAGTTTCTTAATCAGCGCCAATGGCTTCCTC
JMFN028L21+ CCAGGTGGGGCCTCACGTTTCGCCTTGCGGAGTTTCTTAATCAGCGCCAATGGCTTCCTC
rJMFF031C11- CCAGGTGGGGCCTCACGTTTCGCCTTGCGGAGTTTCTTAATCAGCGCCAATGGCTTCCTC
JMFF007A23+ CCAGGTGGGGCCTCACGTTTCGCCTTGCGGAGTTTCTTAATCAGCGCCAATGGCTTCCTC
JMFN016L17+ CCAGGTGGGGCCTCACGTTTCGCCTTGCGGAGTTTCTTAATCAGCGCCAATGGCTTCCTC
JMFF014L16+ CCAGGTGGGGCCTCACGTTTCGCCTTGCGGAGTTTCTTAATCAGCGCCAATGGCTTCCTC
rJMFF014L16- CCAGGTGGGGCCTCACGTTTCGCCTTGCGGAGTTTCTTAATCAGCGCCAATGGCTTCCTC
rJMFF041F16- CCAGGTGGGGCCTCACGTTTCGCCTTGCGGAGTTTCTTAATCAGCGCCAATGGCTTCCTC
JMFF031C11+ CCAGGTGGGGCCTCACGTTTCGCCTTGCGGAGTTTCTTAATCAGCGCCAATGGCTTCCTC
JMSF039A18+ CCAGGTGGGGCCTCACGTTTCGCCTTGCGGAGTTTCTTAATCAGCGCCAATGGCTTCCTN
                      ____________________________________________________________
consensus CCAGGTGGGGCCTCACGTTTCGCCTTGCGGAGTTTCTTAATCAGCGCCAATGGCTTCCTC
 
. : . : . : . : . : . :
JMFN030F03- TTCAATCCCCTCTTAA
JMFF041F16+ TTCAATCCCCTCTTAAACCTTCTGCGAGCGCGGGCAGTGAAGAGCTTAACGAGATCATCG
JMFN016E11+ TTCAATCCCCTCTTAAACCTTCTGCGAGCGCGGGCAGTGAAGAGCTTAACGAGATCATCG
JMFN018P20+ TTCAATCCCCTCTTAAACCTTCTGCGAGCGCGGGCAGTGAAGAGCTTAACGAGATCATCG
JMFN028L21+ TTCAATCCCCTCTTAAACCTTCTGCGAGCGCGGGCAGTGAAGAGCTTAACGAGATCATCG
rJMFF031C11- TTCAATCCCCTCTTAAACCTTCTGCGAGCGCGGGCAGTGAAGAGCTTAACGAGATCATCG
JMFF007A23+ TTCAACCCCCTCTTAAACCTTCTGCGAGCGCGGGCAGTGAAGAGCTTAACGAGATCATCG
JMFN016L17+ TTCAATCCCCTCTTAAACCTTCTGCGAGCGCGGGCAGTGAAGAGCTTAACGAGATCATCG
JMFF014L16+ TTCAATCCCCTCTTAAACCTTCTGCGAGCGCGGGCAGTGAAGAGCTTAACGAGATCATCG
rJMFF014L16- TTCAATCCCCTCTTAAACCTTCTGCGAGCGCGGGCAGTGAAGAGCTTAACGAGATCATCG
rJMFF041F16- TTCAATCCCCTCTTAAACCTTCTGCGAGCGCGGGCAGTGAAGAGCTTAACGAGATCATCG
JMFF031C11+ TTCAATCCCCTCTTAAACCTTCTGCGAGCGCGGGCAGTGAAGAGCTTAACGAGATCATCG
JMSF039A18+ TTCAATCCCCTCTTAAACCTTCTGCGAGCGCGGGCAGTGAAGAGCTTAACGAGATCATCG
                      ____________________________________________________________
consensus TTCAATCCCCTCTTAAACCTTCTGCGAGCGCGGGCAGTGAAGAGCTTAACGAGATCATCG
 
. : . : . : . : . : . :
JMFF041F16+ GTGGACATGTCGAGAAGAGCATCGAGATCCACGCCCCTGAAGCTGAACTTCTTGAACGTT
JMFN016E11+ GTGGACATGTCGAGAAGAGCATCGAGATCCACGCCCCTGAAGCTGAACTTCTTGAACGTT
JMFN018P20+ GTGGACATGTCGAGAAGAGCATCGAGATCCACGCCCCTGAAGCTGAACTTCTTGAACGTT
JMFN028L21+ GTGGACATGTCGAGAAGAGCATCGAGATCCACGCCCCTGAAGCTGAACTTCTTGAACGTT
rJMFF031C11- GTGGACATGTCGAGAAGAGCATCGAGATCCACGCCCCTGAAGCTGAACTTCTTGAACGTT
JMFF007A23+ GTGGACATGTCGAGAAGAGCATCGAGATCCACGCCCCTGAAGCTGAACTTCTTGAACGTT
JMFN016L17+ GTGGACATGTCGAGAAGAGCATCGAGATCCACGCCCCTGAAGCTGAACTTCTTGAACGTT
JMFF014L16+ GTGGACATGTCGAGAAGAGCATCGAGATCCACGCCCCTGAAGCTGAACTTCTTGAACGTT
rJMFF014L16- GTGGACATGTCGAGAAGAGCATCGAGATCCACGCCCCTGAAGCTGAACTTCTTGAACGTT
rJMFF041F16- GTGGACATGTCGAGAAGAGCATCGAGATCCACGCCCCTGAAGCTGAACTTCTTGAACGTT
JMFF031C11+ GTGGACATGTCGAGAAGAGCATCGAGATCCACGCCCCTGAAGCTGAACTTCTTGAACGTT
JMSF039A18+ GTGGACATGTCGAGAAGAGCATCGAGATCCACGCCCCTGAAGCTGAACTTNTTGAACGTT
                      ____________________________________________________________
consensus GTGGACATGTCGAGAAGAGCATCGAGATCCACGCCCCTGAAGCTGAACTTCTTGAACGTT
 
. : . : . : . : . : . :
JMFF041F16+ CTCTTCTTTGGCTGTCCGGCCGCCACATCATGCTCTGCGTCCGCCATTGCTGTGGAAATG
JMFN016E11+ CTCTTCTTTGGCTGTCCGGCCGCCACATCATGCTCTGCGTCCGCCATTGCTGTGGAAATG
JMFN018P20+ CTCTTCTTTGGCTGTCCGGCCGCCACATCATGCTCTGCGTCCGCCATTGCTGTGGAAATG
JMFN028L21+ CTCTTCTTTGGCTGTCCGGCCGCCACATCATGCTCTGCGTCCGCCATTGCTGTGGAAATG
rJMFF031C11- CTCTTCTTTGGCTGTCCGGCCGCCACATCATGCTCTGCGTCCGCCATTGCTGTGGAAATG
JMFF007A23+ CTCTTCTTTGGCTGTCCGGCCGCCACATCATGCTCTGCGTCCGCCATTGCTGTGGAAATG
JMFN016L17+ CTCTTCTTTGGCTGTCCGGCCGCCACATCATGCTCTGCGTCCGCCATTGCTGTGGAAATG
JMFF014L16+ CTCTTCTTTGGCTGTCCGGCCGCCACATCATGCTCTGCGTCCGCCATTGCTGTGGAAATG
rJMFF014L16- CTCTTCTTTGGCTGTCCGGCCGCCACATCATGCTCTGCGTCCGCCATTGCTGTGGAAATG
rJMFF041F16- CTCTTCTTTGGCTGTCCGGCCG
JMFF031C11+ CTCTTCTTTGGCTGTCCGGCCGCCACATCATGCTCTGCGTCCGCCATTGCTGTGGAAATG
JMSF039A18+ NTCTTCTTTGGCTGTCCGGCCGCCACATCATGCTCTGCGTCCGCCATTGCTGTGGAAATG
                      ____________________________________________________________
consensus CTCTTCTTTGGCTGTCCGGCCGCCACATCATGCTCTGCGTCCGCCATTGCTGTGGAAATG
 
. : . : . : . : . : . :
JMFF041F16+ CAAGCTGAATCCTTCGCTGCAGAGTACTGCGAGTGGCGCGACGGGCTCTTAGCGGCGAT
JMFN016E11+ CAAGCTGAATCCTTCGCTGCAGAGTACTGCGAGTGGCGCG
JMFN018P20+ CAAGCTGAATCCTTCGCTGCAGAGTACTGCGAGTGG
JMFN028L21+ CAAGCTGAATCCTTCGCTGCAGAGTACTGCGAGTGGCGC
rJMFF031C11- CAAGCTGAATCCTTCGCTGCAGAGTACTGCGAGTGGCGCGACGGGCTCTTAGCGGCGAT
JMFF007A23+ CAAGCTGAATCCTTCGCTGCAGAGTACTGCGAGTGGCGCGACGGGCTCTTAGCGGCGAT
JMFN016L17+ CAAGCTGAATCCTTCGCTGCAGAGTACTGCGAGTGGCGCGACGG
JMFF014L16+ CAAGCTGAATCCTTCGCTGCAGAGTACTGC
rJMFF014L16- CAAGCTGAATCCTTCGCTGCAGAGTACTGC
JMFF031C11+ CAAGCTGAATCCTTCGCTGCAGAGTACTGCGAGTGGCGCGACGGGCTCTTAGCGGCGAT
JMSF039A18+ CAAGCTGAATCCTTCGCTGCAGAGTACTGCGAGTGGCGCGACGGGCTCTTAGCGGCGATC
                      ____________________________________________________________
consensus CAAGCTGAATCCTTCGCTGCAGAGTACTGCGAGTGGCGCGACGGGCTCTTAGCGGCGATC