Contig 002371:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS073E03+                                                                CGACAAG
                      ____________________________________________________________
consensus                                                                  CGACAAG
 
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JMFS073E03+           GCAATCATATGCACATCAATTTCATCAACATAATCATCAATGAACAACAGCAAGAAATTA
rJMSF038D16-                    GCACATCAATTTCATCAACATAATCATCAATGAACAACAGCAAGAAATTA
                      ____________________________________________________________
consensus             GCAATCATATGCACATCAATTTCATCAACATAATCATCAATGAACAACAGCAAGAAATTA
 
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JMFS073E03+           ATGATAATCAGATACTTAAATTGCATATGAGATTACAAAACGATTACAGGGAGCGAGATT
rJMSF038D16-          ATGATAATCAGATACTTAAATTGCATATGAGATTACAAAACGATTACAGGGAGCGAGATT
                      ____________________________________________________________
consensus             ATGATAATCAGATACTTAAATTGCATATGAGATTACAAAACGATTACAGGGAGCGAGATT
 
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JMFS073E03+           AAAGGGTAAAGACGGGAAATACTATACATTTGGGGGCAATCAAACATTGAACCCTAGGAG
rJMSF038D16-          AAAGGGTAAAGACGGGAAATACTATACATTTGGGGGCAATCAAACATTGAACCCTAGGAG
                      ____________________________________________________________
consensus             AAAGGGTAAAGACGGGAAATACTATACATTTGGGGGCAATCAAACATTGAACCCTAGGAG
 
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JMFS073E03+           ATCAATGGACATGGGGGTGCAAATCCTCGAGATCGGAATCGGAGTCGGAACCCGAGGAGG
rJMSF038D16-          ATCAATGGACATGGGGGTGCAAATCCTCGAGATCGGAATCGGAGTCGGAACCCGAGGAGG
                      ____________________________________________________________
consensus             ATCAATGGACATGGGGGTGCAAATCCTCGAGATCGGAATCGGAGTCGGAACCCGAGGAGG
 
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JMFS073E03+           AAGAGGAAGAGAGATAACGGTCAGGAGAAGGGAAGCAGAAGAAGGTCCAGAGACAGAGAG
rJMSF038D16-          AAGAGGAAGAGAGATAACGGTCAGGAGAAGGGAAGCAGAAGAAGGTCCAGAGACAGAGAG
                      ____________________________________________________________
consensus             AAGAGGAAGAGAGATAACGGTCAGGAGAAGGGAAGCAGAAGAAGGTCCAGAGACAGAGAG
 
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JMFS073E03+           CGAGGCGGCTGAGCTGGCGGCAGGGGAAGCAGAAGAGGAGATACAGAACTTGATCGCGGC
rJMSF038D16-          CGAGGCGGCTGAGCTGGCGGCAGGGGAAGCAGAAGAGGAGATACAGAACTTGATCGCGGC
                      ____________________________________________________________
consensus             CGAGGCGGCTGAGCTGGCGGCAGGGGAAGCAGAAGAGGAGATACAGAACTTGATCGCGGC
 
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JMFS073E03+           TGAGGCGTTCCGGGTTGCAAGCTATGTATTGGCACAAATCTGCTGAAACATTCGCCACCC
rJMSF038D16-          TGAGGCGTTCCGGGTTGCAAGCTATGTATTGGCACAAATCTGCTGAAACATTCGCCACCC
                      ____________________________________________________________
consensus             TGAGGCGTTCCGGGTTGCAAGCTATGTATTGGCACAAATCTGCTGAAACATTCGCCACCC
 
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JMFS073E03+           CCACCACCAGTAAGCTGTTGAACACCATTTTTCCTCCCCTTTCTTCTAACAATCTTCCAA
rJMSF038D16-          CCACCACCAGTAAGCTGTTGAACACCATTTTTCCTCCCCTTTCTTCTAACAATCTTCCAA
                      ____________________________________________________________
consensus             CCACCACCAGTAAGCTGTTGAACACCATTTTTCCTCCCCTTTCTTCTAACAATCTTCCAA
 
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JMFS073E03+           ATCGCTTATCCCCTATCTC                                         
rJMSF038D16-          ATCGCTTATCCCCTATCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
JMSF038D16+                         ATCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
                      ____________________________________________________________
consensus             ATCGCTTATCCCCTATCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
 
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rJMSF038D16-          CTCTATNTATATATATCTCTCNCTCTCTCTCTCT                          
JMSF038D16+           CTCTATTTATATATATATCTCCCTCTATCTCTCTATCTGGGAATCTTGGATAGATTAATC
                      ____________________________________________________________
consensus             CTCTATTTATATATATCTCTCCCTCTCTCTCTCTATCTGGGAATCTTGGATAGATTAATC