Contig 002362:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF037A12Sequence674002362 (3)dbj|BAO57282.1|6e-49POZ/BTB containing protein [Ipomoea nil]702007233 (3)dbj|BAO57282.1|1e-109POZ/BTB containing protein [Ipomoea nil]
JMSF049C04Sequence696002362 (3)dbj|BAO57282.1|3e-38POZ/BTB containing protein [Ipomoea nil]735007233 (3)dbj|BAO57282.1|2e-109POZ/BTB containing protein [Ipomoea nil]
JMSF049M23Sequence686002362 (3)dbj|BAO57282.1|2e-57POZ/BTB containing protein [Ipomoea nil]670007233 (3)dbj|BAO57282.1|4e-103POZ/BTB containing protein [Ipomoea nil]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF049C04+ AAATCATATATAGCTGGATAATCATAGTAAATTAGAATGTGACTGGCAGCA
                      ____________________________________________________________
consensus AAATCATATATAGCTGGATAATCATAGTAAATTAGAATGTGACTGGCAGCA
 
. : . : . : . : . : . :
JMSF049C04+ TGGATAATGTTTCATATAACCCAGCCACATGATAAAGCACTAAAACAGGAACAACTAATA
                      ____________________________________________________________
consensus TGGATAATGTTTCATATAACCCAGCCACATGATAAAGCACTAAAACAGGAACAACTAATA
 
. : . : . : . : . : . :
JMSF049C04+ TACAACAGAAATAAGATACTGTCACAATTGCCGACTCCATTTCATAATCACTTTGTTTGC
                      ____________________________________________________________
consensus TACAACAGAAATAAGATACTGTCACAATTGCCGACTCCATTTCATAATCACTTTGTTTGC
 
. : . : . : . : . : . :
JMSF049C04+ AAGCTCATAAATTGCATTCTTGCTATTCTAAAACCTAGTTGATTAACAATAATCTTTAGA
                      ____________________________________________________________
consensus AAGCTCATAAATTGCATTCTTGCTATTCTAAAACCTAGTTGATTAACAATAATCTTTAGA
 
. : . : . : . : . : . :
JMSF049C04+ ATAAGTTGTAACTTTTATCAGTTTATATAATGCTAACATTTTTTTTTCCTTTTATTATAG
                      ____________________________________________________________
consensus ATAAGTTGTAACTTTTATCAGTTTATATAATGCTAACATTTTTTTTTCCTTTTATTATAG
 
. : . : . : . : . : . :
JMSF049C04+ ACTATGCACAGACATTCACTGAACAAACTACAAAGTACCAGATTGTGCTTCTTCAATCAT
JMSF049M23+ CCAGATTGTGCTTCTTCAATCAT
JMSF037A12+ CCAGATTGTGCTTCTTCAATCAT
                      ____________________________________________________________
consensus ACTATGCACAGACATTCACTGAACAAACTACAAAGTACCAGATTGTGCTTCTTCAATCAT
 
. : . : . : . : . : . :
JMSF049C04+ AGCCACCACTGCCTCATCTTGGTTTCCATTATCAGCATCTTCGGTGTCAATCGGGTTGCA
JMSF049M23+ AGCCACCACTGCCTCATCTTGGTTTCCATTATCAGCATCTTCGGTGTCAATCGGGTTGCA
JMSF037A12+ AGCCACCACTGCCTCATCTTGGTTTCCATTATCAGCATCTTCGGTGTCAATCGGGTTGCA
                      ____________________________________________________________
consensus AGCCACCACTGCCTCATCTTGGTTTCCATTATCAGCATCTTCGGTGTCAATCGGGTTGCA
 
. : . : . : . : . : . :
JMSF049C04+ GTTAACAATTTGCTCCTCTTGGTATGTAGAAATGTCGAGAGCATTTTCCTTAAAGTCACC
JMSF049M23+ GTTAACAATTTGCTCCTCTTGGTATGTAGAAATGTCGAGAGCATTTTCCTTAAAGTCACC
JMSF037A12+ GTTAACAATTTGCTCCTCTTGGTATGTAGAAATGTCGAGAGCATTTTCCTTAAAGTCACC
                      ____________________________________________________________
consensus GTTAACAATTTGCTCCTCTTGGTATGTAGAAATGTCGAGAGCATTTTCCTTAAAGTCACC
 
. : . : . : . : . : . :
JMSF049C04+ TCCTCCGCGTTGCTTGCGATGGCGAGTCCAATCGGCGAGAGTCTGCGATGCATCAGAATC
JMSF049M23+ TCCTCCGCGTTGCTTGCGATGGCGAGTCCAATCGGCGAGAGTCTGCGATGCATCAGAATC
JMSF037A12+ TCCTCCGCGTTGCTTGCGATGGCGAGTCCAATCGGCGAGAGTCTGCGATGCATCAGAATC
                      ____________________________________________________________
consensus TCCTCCGCGTTGCTTGCGATGGCGAGTCCAATCGGCGAGAGTCTGCGATGCATCAGAATC
 
. : . : . : . : . : . :
JMSF049C04+ CGAGCAGGCATCGGAGGAGTCTGCAACGACCTCGATCCGGAGGAGGCGGTCGGAGAAATT
JMSF049M23+ CGAGCAGGCATCGGAGGAGTCTGCAACGACCTCGATCCGGAGGAGGCGGTCGGAGAAATT
JMSF037A12+ CGAGCAGGCATCGGAGGAGTCTGCAACGACCTCGATCCGGAGGAGGCGGTCGGAGAAATT
                      ____________________________________________________________
consensus CGAGCAGGCATCGGAGGAGTCTGCAACGACCTCGATCCGGAGGAGGCGGTCGGAGAAATT
 
. : . : . : . : . : . :
JMSF049C04+ GCTATCGTTGAAAGCGAATCCAAAATCCGGGTGCGGAGGAGCGGACGTGGGAGAGTAATC
JMSF049M23+ GCTATCGTTGAAAGCGAATCCAAAATCCGGGTGCGGAGGAGCGGACGTGGGAGAGTAATC
JMSF037A12+ GCTATCGTTGAAAGCGAATCCAAAATCCGGGTGCGGAGGAGCGGACGTGGGAGAGTAATC
                      ____________________________________________________________
consensus GCTATCGTTGAAAGCGAATCCAAAATCCGGGTGCGGAGGAGCGGACGTGGGAGAGTAATC
 
. : . : . : . : . : . :
JMSF049C04+ CGGGTCCATAACCGCCGTTCTCGGGTCGAAGAGGTCCAAAATCT
JMSF049M23+ CGGGTCCATAACCGCCGTTCTCGGGTCGAAGAGGTCCAAAATCTGGTCCTTCATAGTACC
JMSF037A12+ CGGGTCCATAACCGCCGTTCTCGGGTCGAAGAGGTCCAAAATCTGGTCCTTCATAGTACC
                      ____________________________________________________________
consensus CGGGTCCATAACCGCCGTTCTCGGGTCGAAGAGGTCCAAAATCTGGTCCTTCATAGTACC
 
. : . : . : . : . : . :
JMSF049M23+ GTCCCTCCCTCAAAAACCCTAGCCTTTGCTGCTTCTACTGTTAGAGTGTGAGTACTGCTA
JMSF037A12+ GTCCCTCCCTCAAAAACCCTAGCCTTTGCTGCTTCTACTGTTAGAGTGTGAGTACTGCTA
                      ____________________________________________________________
consensus GTCCCTCCCTCAAAAACCCTAGCCTTTGCTGCTTCTACTGTTAGAGTGTGAGTACTGCTA
 
. : . : . : . : . : . :
JMSF049M23+ GAGTAGTACCAAAATTTCCTCACCTGCCCGCTTAATGAAATGGAGAAAATTGAGCAGAAA
JMSF037A12+ GAGTAGTACCAAAATTTCCTCACCTGCCCGCTTAATGAAATGGAGAAAATTGAGCAGAAA
                      ____________________________________________________________
consensus GAGTAGTACCAAAATTTCCTCACCTGCCCGCTTAATGAAATGGAGAAAATTGAGCAGAAA
 
. : . : . : . : . : . :
JMSF049M23+ TTGAAGACGACTTGAACAAACACGAGTCTATGATTACGCAAACGTTAAAGTTCATTTATC
JMSF037A12+ TTGAAGACGACTTGAACAAACACGAGTCTATGATTACGCAAACGTTAAAGTTCATTTATC
                      ____________________________________________________________
consensus TTGAAGACGACTTGAACAAACACGAGTCTATGATTACGCAAACGTTAAAGTTCATTTATC
 
. : . : . : . : . : . :
JMSF049M23+ AATTTTCAAAAATGAACTCCTCGT
JMSF037A12+ AATTTTCAAAAATGAACTCCTCGTAGTCTTGACCGCTGTTACTCCTGTTAGCTTATTACC
                      ____________________________________________________________
consensus AATTTTCAAAAATGAACTCCTCGTAGTCTTGACCGCTGTTACTCCTGTTAGCTTATTACC