Contig 002359:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003O14Sequence266002359 (3)749002389 (7)gb|AAD09831.1|4e-07unknown [Nicotiana tabacum]
JMSF005I17Sequence387002359 (3)
JMSF036L13Sequence651002359 (3)750002389 (7)gb|AAD09831.1|4e-06unknown [Nicotiana tabacum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF036L13+ TATCCTGCCTACCGTATCGCCTCGTCTCTACCTATATTATACAAATGCATG
                      ____________________________________________________________
consensus TATCCTGCCTACCGTATCGCCTCGTCTCTACCTATATTATACAAATGCATG
 
. : . : . : . : . : . :
JMSF036L13+ ATTATCACCATTCACAAGCTTAAATAAAGAGCGAAACATAAATCAACGGAACAATCAATA
                      ____________________________________________________________
consensus ATTATCACCATTCACAAGCTTAAATAAAGAGCGAAACATAAATCAACGGAACAATCAATA
 
. : . : . : . : . : . :
JMSF036L13+ AACCATCTTAACCTTGATCAACACAGCACTTCATTTTCCCAATCTAGACCATCCGATCAA
                      ____________________________________________________________
consensus AACCATCTTAACCTTGATCAACACAGCACTTCATTTTCCCAATCTAGACCATCCGATCAA
 
. : . : . : . : . : . :
JMSF036L13+ ATAGGTCACATTCGATCAGCTCCGGTGGTCCAAAATAGAAACATCCACATAGCCGATCAA
                      ____________________________________________________________
consensus ATAGGTCACATTCGATCAGCTCCGGTGGTCCAAAATAGAAACATCCACATAGCCGATCAA
 
. : . : . : . : . : . :
JMSF036L13+ ACAAAAAACCAAGCAATCATAGTTGCTTTCACAATGATCTCACCAAATCGGTGAGAGCGA
                      ____________________________________________________________
consensus ACAAAAAACCAAGCAATCATAGTTGCTTTCACAATGATCTCACCAAATCGGTGAGAGCGA
 
. : . : . : . : . : . :
JMSF036L13+ ACAATCAGACAGCTAATAGAGGCGAGAGAAGATAGCAACCGCCATGTCCTTCGCGACATC
                      ____________________________________________________________
consensus ACAATCAGACAGCTAATAGAGGCGAGAGAAGATAGCAACCGCCATGTCCTTCGCGACATC
 
. : . : . : . : . : . :
JMSF036L13+ ACGGAAACTCAGGCGAAACAACTCGAAAAACAGTAAAACGAATTAGAAATTACAGTAATT
                      ____________________________________________________________
consensus ACGGAAACTCAGGCGAAACAACTCGAAAAACAGTAAAACGAATTAGAAATTACAGTAATT
 
. : . : . : . : . : . :
JMSF005I17+ CTCCGACGATGCAGCACCAACCGTCATCAGATACGGCTTATC
JMSF003O14+ GACGATGCAGCACCAACCGTCATCAGATACGGCTTATC
JMSF036L13+ GAAGACTAGTCAGATTACCTCCGACGATGCAGCACCAACCGTCATCAGATACGGCTTATC
                      ____________________________________________________________
consensus GAAGACTAGTCAGATTACCTCCGACGATGCAGCACCAACCGTCATCAGATACGGCTTATC
 
. : . : . : . : . : . :
JMSF005I17+ CTCCGATGTTCATCAACTACCAACAAAATCATGCTCAATCAATAGATCGTCGATCGATCT
JMSF003O14+ CTCCGATGTTCATCAACTACCAACAAAATCATGCTCAATCAATAGATCGTCGATCGATCT
JMSF036L13+ CTCCGATGTTCATCAACTACCAACAAAATCATGCTCAATCAATAGATCGTCGATCGATCT
                      ____________________________________________________________
consensus CTCCGATGTTCATCAACTACCAACAAAATCATGCTCAATCAATAGATCGTCGATCGATCT
 
. : . : . : . : . : . :
JMSF005I17+ ATAAGGAAATTAAGGAAGCATCGACGGAAAACATCGCTGGTCGCATAGATCTGAACAAAT
JMSF003O14+ ATAAGGAAATTAAGGAAGCATCGACGGAAAACATCGCTGGTCGCATAGATCTGAACAAAT
JMSF036L13+ ATAAGGAAATTAAGGAAGCATCGACGGAAAACATCGCTGGTCGCATAGATCTGAACAAAT
                      ____________________________________________________________
consensus ATAAGGAAATTAAGGAAGCATCGACGGAAAACATCGCTGGTCGCATAGATCTGAACAAAT
 
. : . : . : . : . : . :
JMSF005I17+ TTGCATATCTGCAGAGAAAGTACAAACGACAAGAGGCCAGACGGCTGTAAAATGC
JMSF003O14+ TTGCATATCTGCAGAGAAAGTACAAACGACAAGAGGCCAGACGGCTGTAAAATGC
JMSF036L13+ TTGCATATCTGCAGAGAAAGTACAAACGACAAGAGGCCAGACGGCTGTAAAATGCGATCC
                      ____________________________________________________________
consensus TTGCATATCTGCAGAGAAAGTACAAACGACAAGAGGCCAGACGGCTGTAAAATGCGATCC