Contig 002352:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF035L14Sequence653002352 (3)emb|CDP14901.1|1e-64unnamed protein product [Coffea canephora]652002964 (3)ref|XP_009619557.1|2e-45PREDICTED: basic proline-rich protein [Nicotiana tomentosiformis]
JMSF042G05Sequence804002352 (3)emb|CDP14901.1|5e-66unnamed protein product [Coffea canephora]814002964 (3)ref|XP_009619557.1|7e-45PREDICTED: basic proline-rich protein [Nicotiana tomentosiformis]
JMSF043L12Sequence793002352 (3)emb|CDP14901.1|2e-66unnamed protein product [Coffea canephora]767002964 (3)ref|XP_009619557.1|3e-45PREDICTED: basic proline-rich protein [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF043L12+                          CAACGATGTGTCCAAGTCTGCCGTTGCGGGTTTTGGAGGCATAGG
JMSF042G05+                                               CGTTGCGGGTTTTGGAGGCATAGG
                      ____________________________________________________________
consensus                            CAACGATGTGTCCAAGTCTGCCGTTGCGGGTTTTGGAGGCATAGG
 
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JMSF043L12+           AGGTGGAGGAGGTAAAGGCAAAGATGAAGGCATCATTGAACCATCTACAGAATCTGCATT
JMSF042G05+           AGGTGGAGGAGGTAAAGGCAAAGATGAAGGCATCATTGAACCATCTACAGAATCTGCATT
                      ____________________________________________________________
consensus             AGGTGGAGGAGGTAAAGGCAAAGATGAAGGCATCATTGAACCATCTACAGAATCTGCATT
 
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JMSF043L12+           ACTTGGGTAAGGAGGTGAAGGAAGTGGAAGAGAGGCGGGTAAACCACCATCCTCTAATTC
JMSF042G05+           ACTTGGGTAAGGAGGTGAAGGAAGTGGAAGAGAGGCGGGTAAACCACCATCCTCTAATTC
                      ____________________________________________________________
consensus             ACTTGGGTAAGGAGGTGAAGGAAGTGGAAGAGAGGCGGGTAAACCACCATCCTCTAATTC
 
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JMSF043L12+           AAGCATTGACGATGATCCAGCACCACTAGATGAAGCCTCTGACAATGGTATTCTAGGTCC
JMSF042G05+           AAGCATTGACGATGATCCAGCACCACTAGATGAAGCCTCTGACAATGGTATTCTAGGTCC
JMSF035L14+                  GACGATGATCCAGCACCACTAGATGAAGCCTCTGACAATGGTATTCTAGGTCC
                      ____________________________________________________________
consensus             AAGCATTGACGATGATCCAGCACCACTAGATGAAGCCTCTGACAATGGTATTCTAGGTCC
 
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JMSF043L12+           TATTGATGATTTAAACATGGGAGGCTTCCCAGGAGGAGGAGCTCCAGTAGGATTTAGTGT
JMSF042G05+           TATTGATGATTTAAACATGGGAGGCTTCCCAGGAGGAGGAGCTCCAGTAGGATTTAGTGT
JMSF035L14+           TATTGATGANTTAAACATGGGAGGCTTCCCAGGAGGAGGAGCTCCAGTAGGATTTAGTGT
                      ____________________________________________________________
consensus             TATTGATGATTTAAACATGGGAGGCTTCCCAGGAGGAGGAGCTCCAGTAGGATTTAGTGT
 
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JMSF043L12+           AGGGTGATAATAGACCGAGTCCTCAGGTTTTGGGTGTTTGACCCTATCTTCCTCTTCAGC
JMSF042G05+           AGGGTGATAATAGACCGAGTCCTCAGGTTTTGGGTGTTTGACCCTATCTTCCTCTTCAGC
JMSF035L14+           AGGGTGATAATAGACCGAGTCCTCAGGTTTTGGGTGTTTGACCCTATCTTCCTCTTCAGC
                      ____________________________________________________________
consensus             AGGGTGATAATAGACCGAGTCCTCAGGTTTTGGGTGTTTGACCCTATCTTCCTCTTCAGC
 
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JMSF043L12+           AGTAGCCCGCCTTCGTGGAGGTGGTCCCAAATGACTGAACATAACTGGTGCTTCACCCTT
JMSF042G05+           AGTAGCCCGCCTTCGTGGAGGTGGTCCCAAATGACTGAACATAACTGGTGCTTCACCCTT
JMSF035L14+           AGTAGCCCGCCTTCGTGGAGGTGGTCCCAAATGACTGAACATAACTGGTGCTTCACCCTT
                      ____________________________________________________________
consensus             AGTAGCCCGCCTTCGTGGAGGTGGTCCCAAATGACTGAACATAACTGGTGCTTCACCCTT
 
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JMSF043L12+           ATCTTTCAATTTATCTTCATATTCCTTCCTCTTCTTGATAACAAGATTTAGGGTATCTTC
JMSF042G05+           ATCTTTCAATTTATCTTCATATTCCTTCCTCTTCTTGATAACAAGATTTAGGGTATCTTC
JMSF035L14+           ATCTTTCAATTNATCTTCATATTCCTTCCTCTTCTTGATAACAAGATTTAGGGTATCTTC
                      ____________________________________________________________
consensus             ATCTTTCAATTTATCTTCATATTCCTTCCTCTTCTTGATAACAAGATTTAGGGTATCTTC
 
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JMSF043L12+           AAGTTGCCTCTTCTTGTGTTTTCTTGCTTTGTCCAGAGCACCTTCTGCCTTCATGACTTC
JMSF042G05+           AAGTTGCCTCTTCTTGTGTTTTCTTGCTTTGTCCAGAGCACCTTCTGCCTTCATGACTTC
JMSF035L14+           AAGTTGCCTCTTCTTGTGTTTTCTTGCNTTGTCCAGAGCACCTTCTGCCTTCATGACTTC
                      ____________________________________________________________
consensus             AAGTTGCCTCTTCTTGTGTTTTCTTGCTTTGTCCAGAGCACCTTCTGCCTTCATGACTTC
 
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JMSF043L12+           TAGCTTCTGAATTTGCTCTCTCAATTGCTCAGGATCTTTCTTCAAAATACCCACTTCCCT
JMSF042G05+           TAGCTTCTGAATTTGCTCTCTCAATTGCTCAGGATCTTTCTTCAAAATACCCACTTCCCT
JMSF035L14+           TAGCTTCTGAATTTGCTCTCTCAATTGCTCAGGATCTTTCTTCAAAATACCCACTTCCCT
                      ____________________________________________________________
consensus             TAGCTTCTGAATTTGCTCTCTCAATTGCTCAGGATCTTTCTTCAAAATACCCACTTCCCT
 
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JMSF043L12+           CACCTTCTTCCTTTCTTTTTTATTCCGTTTCAATTCGCGCTTACGAAGCTCCTTCCGATA
JMSF042G05+           CACCTTCTTCCTTTCTTTTTTATTCCGTTTCAATTCGCGCTTACGAAGCTCCTTCCGATA
JMSF035L14+           CACCTTCTTCCTTTCTTTTTTATTCCGTTTCAATTCGCGCTTACGAAGCTCCTTCCGATA
                      ____________________________________________________________
consensus             CACCTTCTTCCTTTCTTTTTTATTCCGTTTCAATTCGCGCTTACGAAGCTCCTTCCGATA
 
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JMSF043L12+           GGCATCGGTAGGGTTCATGACTTTGCCTCCCTTCGTGGTCTTCATTTCTCCGCGAGCTCT
JMSF042G05+           GGCATCGGTAGGGTTCATGACTTTGCCTCCCTTCGTGGTCTTCATTTCTCCGCGAGCTCT
JMSF035L14+           GGCATCGGTAGGGTTCATGACTTTGCCTCCNTTCGTGGTCTTCATTTCTCCGCGAGCTCT
                      ____________________________________________________________
consensus             GGCATCGGTAGGGTTCATGACTTTGCCTCCCTTCGTGGTCTTCATTTCTCCGCGAGCTCT
 
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JMSF043L12+           GAGCCCTAATTGTTCCCTGCTACAGCTGAGTCTCCCCGCGCGTTATTCTTCTTCCCCGAT
JMSF042G05+           GAGCCCTAATTGTTCCCTGCTACAGCTGAGTCTCCCCGCGCGTTATTCTTCTTCCCCGAT
JMSF035L14+           GAGCCCTAATTGTTCCCTGCTACAGCTGAGTCTCCCCGCGCGTTATTCTTCTTCCCCGAT
                      ____________________________________________________________
consensus             GAGCCCTAATTGTTCCCTGCTACAGCTGAGTCTCCCCGCGCGTTATTCTTCTTCCCCGAT
 
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JMSF043L12+           TGGGTAGGAGAATAGACAACAGTTCTC                                 
JMSF042G05+           TGGGTAGGAGAATAGACAACAGTTCTCTGTTCTTTGGTTCTGATTCTCGACTTATTTC  
JMSF035L14+           TGGGTAGGAGAATAGACAACAGTTCTCTGTTCTTTGGTTCTGATTCTCGACTTATTTCTC
                      ____________________________________________________________
consensus             TGGGTAGGAGAATAGACAACAGTTCTCTGTTCTTTGGTTCTGATTCTCGACTTATTTCTC