| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS140A01 | Sequence | 614 | 002347 (6) | ref|XP_009624146.1| | 8e-117 | PREDICTED: L-arabinokinase-like [Nicotiana tomentosiformis] | |||||
| JMFS151G09 | Sequence | 626 | 002347 (6) | ref|XP_009624146.1| | 4e-123 | PREDICTED: L-arabinokinase-like [Nicotiana tomentosiformis] | |||||
| JMSF016B01 | Sequence | 464 | 002347 (6) | ref|XP_008361159.1| | 3e-70 | PREDICTED: L-arabinokinase-like [Malus domestica] | |||||
| JMSF019E16 | Sequence | 513 | 002347 (6) | ref|XP_008361159.1| | 8e-70 | PREDICTED: L-arabinokinase-like [Malus domestica] | 112 | 024536 | |||
| JMSF034N23 | Sequence | 541 | 002347 (6) | ref|XP_009788726.1| | 6e-54 | PREDICTED: L-arabinokinase-like [Nicotiana sylvestris] | |||||
| JMSF038C23 | Sequence | 664 | 002347 (6) | ref|XP_009624146.1| | 1e-130 | PREDICTED: L-arabinokinase-like [Nicotiana tomentosiformis] | 151 | 023587 | ref|XP_009788726.1| | 0.001 | PREDICTED: L-arabinokinase-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFS151G09+ AGGTACATCAA
JMSF038C23+ CTTCACGGGATTTGTGCAATCTTCGGACAACCAGAGGTACATCAA
____________________________________________________________
consensus CTTCACGGGATTTGTGCAATCTTCGGACAACCAGAGGTACATCAA
. : . : . : . : . : . :
JMFS151G09+ TTACATCTCGGAAAGCTGGCATTGGGCAGAATCCTGGGAGCCGGATAAGGAATTCACAAT
JMSF038C23+ TTACATCTCGGAAAGCTGGCATTGGGCAGAATCCTGGGAGCCGGATAAGGAATTCACAAT
JMFS140A01+ GCTGGCATTGGGCAGAATCCTGGGAGCCGGATAAGGAATTCACAAT
____________________________________________________________
consensus TTACATCTCGGAAAGCTGGCATTGGGCAGAATCCTGGGAGCCGGATAAGGAATTCACAAT
. : . : . : . : . : . :
JMFS151G09+ GAGAATAATCCTCTGCAATCTGCCAAACTATTGACCGATGATGATTTCCAGCTGCCATGA
JMSF038C23+ GAGAATAATCCTCTGCAATCTGCCAAACTATTGACCGATGATGATTTCCAGCTGCCATGA
JMFS140A01+ GAGAATAATCCTCTGCAATCTGCCAAACTATTGACCGATGATGATTTCCAGCTGCCATGA
____________________________________________________________
consensus GAGAATAATCCTCTGCAATCTGCCAAACTATTGACCGATGATGATTTCCAGCTGCCATGA
. : . : . : . : . : . :
JMFS151G09+ CATATTCAGCATAGATGAAATCCCAGCTGAAGTTGGTGACACAAACAGAGGGAATCCCAG
JMSF038C23+ CATATTCAGCATAGATGAAATCCCAGCTGAAGTTGGTGACACAAACAGAGGGAATCCCAG
JMFS140A01+ CATATTCAGCATAGATGAAATCCCAGCTGAAGTTGGTGACACAAACAGAGGGAATCCCAG
____________________________________________________________
consensus CATATTCAGCATAGATGAAATCCCAGCTGAAGTTGGTGACACAAACAGAGGGAATCCCAG
. : . : . : . : . : . :
JMFS151G09+ CATCAGCTGCTGCCCGGCAAGCAACTGGAACAACATCTGATACCACTAAGTCTGCCTTGA
JMSF038C23+ CATCAGCTGCTGCCCGGCAAGCAACTGGAACAACATCTGATACCACTAAGTCTGCCTTGA
JMFS140A01+ CATCAGCTGCTGCCCGGCAAGCAACTGGAACAACATCTGATACCACTAAGTCTGCCTTGA
JMSF016B01+ GCTGCTGCCCGGCAAGCAACTGGAACAACATCTGATACCACTAAGTCTGCCTTGA
JMSF019E16+ CTGCTGCCCGGCAAGCAACTGGAACAACATCTGATACCACTAAGTCTGCCTTGA
JMSF034N23+ A
____________________________________________________________
consensus CATCAGCTGCTGCCCGGCAAGCAACTGGAACAACATCTGATACCACTAAGTCTGCCTTGA
. : . : . : . : . : . :
JMFS151G09+ TGGATTTCAGCCACTCCACTTCCGTAGCCAAAACAGATGCACGAGGTACAACAGCTGTTT
JMSF038C23+ TGGATTTCAGCCACTCCACTTCCGTAGCCAAAACAGATGCACGAGGTACAACAGCTGTTT
JMFS140A01+ TGGATTTCAGCCACTCCACTTCCGTAGCCAAAACAGATGCACGAGGTACAACAGCTGTTT
JMSF016B01+ TGGATTTCAGCCACTCCACTTCCGTAGCCAAAACAGATGCACGAGGTACAACAGCTGTTT
JMSF019E16+ TGGATTTCAGCCACTCCACTTCCGTAGCCAAAACAGATGCACGAGGTACAACAGCTGTTT
JMSF034N23+ TGGATTTCAGCCACTCCACTTCCGTAGCCAAAACAGATGCACGAGGTACANCAGCTGTTT
____________________________________________________________
consensus TGGATTTCAGCCACTCCACTTCCGTAGCCAAAACAGATGCACGAGGTACAACAGCTGTTT
. : . : . : . : . : . :
JMFS151G09+ CAGAATATTTTTCCAACGACGCAAGACGATCCACTGTCAAAGCATCCGCTTGAACTGCTC
JMSF038C23+ CAGAATATTTTTCCAACGACGCAAGACGATCCACTGTCAAAGCATCCGCTTGAACTGCTC
JMFS140A01+ CAGAATATTTTTCCAACGACGCAAGACGATCCACTGTCAAAGCATCCGCTTGAACTGCTC
JMSF016B01+ CAGAATATTTTTCCAACGACGCAAGACGATCCACTGTCAAAGCATCCGCTTGAACTGCTC
JMSF019E16+ CAGAATATTTTTCCAACGACGCAAGACGATCCACTGTCAAAGCATCCGCTTGAACTGCTC
JMSF034N23+ CAGAATATTTTTCCAACGACGCAAGACGATCCACTGTCAAAGCATCCGCTTGAACTGCTC
____________________________________________________________
consensus CAGAATATTTTTCCAACGACGCAAGACGATCCACTGTCAAAGCATCCGCTTGAACTGCTC
. : . : . : . : . : . :
JMFS151G09+ CACAATCCAACAGTACCTTGCGAAGAAAAAGTCTAGAGGACTGTATCTCAGATGTGAAAA
JMSF038C23+ CACAATCCAACAGTACCTTGCGAAGAAAAAGTCTAGAGGACTGTATCTCAGATGTGAAAA
JMFS140A01+ CACAATCCAACAGTACCTTGCGAAGAAAAAGTCTAGAGGACTGTATCTCAGATGTGAAAA
JMSF016B01+ CACAATCCAACAGTACCTTGCGAAGAAAAAGTCTAGAGGACTGTATCTCAGATGTGAAAA
JMSF019E16+ CACAATCCAACAGTACCTTGCGAAGAAAAAGTCTAGAGGACTGTATCTCAGATGTGAAAA
JMSF034N23+ CACAATCCAACANTACCTTGNGAAGAAAAAGTNTAGAGGACNGTATCTCAGATGTGAAAA
____________________________________________________________
consensus CACAATCCAACAGTACCTTGCGAAGAAAAAGTCTAGAGGACTGTATCTCAGATGTGAAAA
. : . : . : . : . : . :
JMFS151G09+ CAAAGTCTGGCGCACCAGTGATCACATGCACATCATGTCCAGCGAGAATGAGATTCCGAA
JMSF038C23+ CAAAGTCTGGCGCACCAGTGATCACATGCACATCATGTCCAGCGAGAATGAGATTCCGAA
JMFS140A01+ CAAAGTCTGGCGCACCAGTGATCACATGCACATCATGTCCAGCGAGAATGAGATTCCGAA
JMSF016B01+ CAAAGTCTGGCGCACCAGTGATCACATGCACATCATGTCCAGCGAGAATGAGATTCCGAA
JMSF019E16+ CAAAGTCTGGCGCACCAGTGATCACATGCACATCATGTCCAGCGAGAATGAGATTCCGAA
JMSF034N23+ CAAAGTCTGGCGCACCAGTGATCACATGCACATCATGTCCAGCGAGAATGAGATTCCGAA
____________________________________________________________
consensus CAAAGTCTGGCGCACCAGTGATCACATGCACATCATGTCCAGCGAGAATGAGATTCCGAA
. : . : . : . : . : . :
JMFS151G09+ CAACCTCGACAACACGAGTAGCGTGTCCGAATCCATGGCCGGTGACATAGTAAGCAAAGA
JMSF038C23+ CAACCTCGACAACACGAGTAGCGTGTCCGAATCCATGGCCGGTGACATAGTAAGCAAAGA
JMFS140A01+ CAACCTCGACAACACGAGTAGCGTGTCCGAATCCATGGCCGGTGACATAGTAAGCAAAGA
JMSF016B01+ CAACCTCGACAACACGAGTAGCGTGTCCGAATCCATGGCCGGTGACATAGTAAGCAAAGA
JMSF019E16+ CAACCTCGACAACACGAGTAGCGTGTCCGAATCCATGGCCGGTGACATAGTAAGCAAAGA
JMSF034N23+ CAACCTCGACAACACGAGTAGCGTGTCCGAATCCATGGCCGGTGACATAGTAAGCAAAGA
____________________________________________________________
consensus CAACCTCGACAACACGAGTAGCGTGTCCGAATCCATGGCCGGTGACATAGTAAGCAAAGA
. : . : . : . : . : . :
JMFS151G09+ CGAGAGGTTGTTTAGCAGCCCCCATATTTGTGCAATTCCGTGTGAAGCAATATGCAAAAC
JMSF038C23+ CGAGAGGTTGTTTAGCAGCCCCCATATTTGTGCAATTCCGTGTGAAGCAATATGCAAAAC
JMFS140A01+ CGAGAGGTTGTTTAGCAGCCCCCATATTTGTGCAATTCCGTGTGAAGCAATATGCAAAAC
JMSF016B01+ CGAGAGGTTGTTTAGCAGCCCCCATATTTGTGCAATTCCGTGTGAAGCAATATGCAAAAC
JMSF019E16+ CGAGAGGTTGTTTAGCAGCCCCCATATTTGTGCAATTCCGTGTGAAGCAATATGCAAAAC
JMSF034N23+ CGAGAGGTTGTTTAGCAGCCNCCATATTTGTGCAATTCCGTGTGAAGCAATNTGCAAAAC
____________________________________________________________
consensus CGAGAGGTTGTTTAGCAGCCCCCATATTTGTGCAATTCCGTGTGAAGCAATATGCAAAAC
. : . : . : . : . : . :
JMFS151G09+ TGGAAGTACGGAGCA
JMSF038C23+ TGGAAGTACGGAGCAGA
JMFS140A01+ TGGAAGTACGGAGCAGAGAGAGTGCTTT
JMSF016B01+ TGGAAGTACGGAGCAGAGAGAGTGCTTTGTTTGGGATGGGAGTTAGAT
JMSF019E16+ TGGAAGTACGGAGCAGAGAGAGTGCTTTGTTTGGGATGGGAGTTAGATGAAAAGTGAAAA
JMSF034N23+ TGGAAGTACGGAGCAGAGAGAGTGCTTTGTTTGGGATGGGAGTTAGATGAAAAGTGAAAA
____________________________________________________________
consensus TGGAAGTACGGAGCAGAGAGAGTGCTTTGTTTGGGATGGGAGTTAGATGAAAAGTGAAAA
. : . : . : . : . : . :
JMSF019E16+ CGTCGCAGTCCTATAATATCGGGATTTTGGAGGATG
JMSF034N23+ CGTCGCAGTCCTATAATATCGGGATTTTGGAGGATGNTGACATCAGAACTGGGTCGGAAG
____________________________________________________________
consensus CGTCGCAGTCCTATAATATCGGGATTTTGGAGGATGNTGACATCAGAACTGGGTCGGAAG
. : . : . : . : . : . :
JMSF034N23+ CCTTATCTTGTTTCAGTTTTCCCGTTTTGCGTGTCCGACTACGACTTAAACAATAGCCCC
____________________________________________________________
consensus CCTTATCTTGTTTCAGTTTTCCCGTTTTGCGTGTCCGACTACGACTTAAACAATAGCCCC