Contig 002322:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046D02Sequence490002322 (6)347002696 (2)
JMFS019F05Sequence576002322 (6)
JMFS089A03Sequence610002322 (6)
JMFS123H11Sequence567002322 (6)
JMFS164A01Sequence592002322 (6)
JMSF032C19Sequence645002322 (6)782002696 (2)ref|XP_002275001.1|4e-79PREDICTED: formin-like protein 1 [Vitis vinifera]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS164A01+                       CGCTGACATCAGCGTCGGAGGGAGTGGCATTGGGCGGCACAAGGCGGA
                      ____________________________________________________________
consensus                         CGCTGACATCAGCGTCGGAGGGAGTGGCATTGGGCGGCACAAGGCGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS164A01+           GGCTGTCTGTTCTTTGCCGGCGGTCGGTTTTCTCGTGGTCGCGGTGATGGAGGAGAAACG
JMFS089A03+                                                GTCGCGGTGATGGAGGAGAAACG
                      ____________________________________________________________
consensus             GGCTGTCTGTTCTTTGCCGGCGGTCGGTTTTCTCGTGGTCGCGGTGATGGAGGAGAAACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS164A01+           CCGCCAGTAAGGTAAGAAGGGCAGCAAAAACCAGAGAAACGGCGACTATAACAGCGATGA
JMFS089A03+           CCGCCAGTAAGGTAAGAAGGGCAGCAAAAACCAGAGAAACGGCGACTATAACAGCGATGA
                      ____________________________________________________________
consensus             CCGCCAGTAAGGTAAGAAGGGCAGCAAAAACCAGAGAAACGGCGACTATAACAGCGATGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS164A01+           GTTTCCGGGAAATGGGTCTGCTAGAGTTGGAGGATGAAGACTGCGGGAGAATGAGGGAAG
JMFS089A03+           GTTTCCGGGAAATGGGTCTGCTAGAGTTGGAGGATGAAGACTGCGGGAGAATGAGGGAAG
JMFS019F05+                                               AAGACTGCGGGAGAATGAGGGAAG
JMFS123H11+                                   AGTTGGAGGATGAAGACTGCGGGAGAATGAGGGAAG
JMSF032C19+                          GTCTGCTAGAGTTGGAGGATGAAGACTGCGGGAGAATGAGGGAAG
                      ____________________________________________________________
consensus             GTTTCCGGGAAATGGGTCTGCTAGAGTTGGAGGATGAAGACTGCGGGAGAATGAGGGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS164A01+           AAATGTTGGCCGGAAACGTAGGGAGGCCCGTCGAAGCCGGCAGAGGCGGCGGCGGAGGGG
JMFS089A03+           AAATGTTGGCCGGAAACGTAGGGAGGCCCGTCGAAGCCGGCAGAGGCGGCGGCGGAGGGG
JMFS019F05+           AAATGTTGGCCGGAAACGTAGGGAGGCCCGTCGAAGCCGGCAAAGGCGGCGGCGGAGGGG
JMFS123H11+           AAATGTTGGCCGGAAACGTAGGGAGGCCCGTCGAAGCCGGCAGAGGCGGCGGCGGAGGGG
JMSF032C19+           AAATGTTGGCCGGAAACGTAGGGAGGCCCGTCGAAGCCGGCAGAGGCGGCGGCGGAGGGG
                      ____________________________________________________________
consensus             AAATGTTGGCCGGAAACGTAGGGAGGCCCGTCGAAGCCGGCAGAGGCGGCGGCGGAGGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS164A01+           AGGAGTAATATGGGAAAAACGGGTTCTGAGATGAGGGCGTAGTAGTGGGAGGCGACTGCG
JMFS089A03+           AGGAGTAATATGGGAAAAACGGGTTCTGAGATGAGGGCGTAGTAGTGGGAGGCGACTGCG
JMFS019F05+           AGGAGTAATATGGGAAAAACGGGTTCTGAGATGAGGGCGTAGTAGTGGGAGGCGACTGCG
JMFS123H11+           AGGAGTAATATGGGAAAAACGGGTTCTGAGATGAGGGCGTAGTAGTGGGAGGCGACTGCG
JMFF046D02+                             ACGGGTTCTGAGATGAGGGCGTAGTAGTGGGAGGCGACTGCG
JMSF032C19+           AGGAGTAATATGGGAAAAACGGGTTCTGAGATGAGGGCGTAGTAGTGGGAGGCGACTGCG
                      ____________________________________________________________
consensus             AGGAGTAATATGGGAAAAACGGGTTCTGAGATGAGGGCGTAGTAGTGGGAGGCGACTGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS164A01+           ACGAAAACGGGTACTTGGGTTGAAGCTGCGGGTGAGGCTGCGGTAGCGGAGACGCCGCGG
JMFS089A03+           ACGAAAACGGGTACTTGGGTTGAAGCTGCGGGTGAGGCTGCGGTAGCGGAGACGCCGCGG
JMFS019F05+           ACGAAAACGGGTACTTGGGTTGAAGCTGCGGGTGAGGCTGCGGTAGCGGAGACGCCGCGG
JMFS123H11+           ACGAAAACGGGTACTTGGGTTGAAGCTGCGGGTGAGGCTGCGGTAGCGGAGACGCCGCGG
JMFF046D02+           ACGAAAACGGGTACTTGGGTTGAAGCTGCGGGTGAGGCTGCGGTAGCGGAGACGCCGCGG
JMSF032C19+           ACGAAAACGGGTACTTGGGTTGAAGCTGCGGGTGAGGCTGCGGTAGCGGAGACGCCGCGG
                      ____________________________________________________________
consensus             ACGAAAACGGGTACTTGGGTTGAAGCTGCGGGTGAGGCTGCGGTAGCGGAGACGCCGCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS164A01+           GAGTCTGAGAGATACTTGTAGGGGTCGGGTCCGGCGGCGGTGTGGGAGTCAGAGGAGTAC
JMFS089A03+           GAGTCTGAGAGATACTTGTAGGGGTCGGGTCCGGCGGCGGTGTGGGAGTCAGAGGAGTAC
JMFS019F05+           GAGTCTGAGAGATACTTGTAGGGGTCGGGTCCGGCGGCGGTGTGGGAGTCAGAGGAGTAC
JMFS123H11+           GAGTCTGAGAGATACTTGTAGAGGTCGGGTCCGGCGGCGGTGTGGGAGTCAGAGGAGTAC
JMFF046D02+           GAGTCTGAGAGATACTTGTAGGGGTCGGGTCCGGCGGCGGTGTGGGAGTCAGAGGAGTAC
JMSF032C19+           GAGTCTGAGAGATACTTGTAGGGGTCGGGTCCGGCGGCGGTGTGGGAGTCAGAGGAGTAC
                      ____________________________________________________________
consensus             GAGTCTGAGAGATACTTGTAGGGGTCGGGTCCGGCGGCGGTGTGGGAGTCAGAGGAGTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS164A01+           TAAGTGGGTAGAGAGGCTGGTGAAGGATCCGGCGGTTGGCGCCGGCGGCAGTAGTGAGGG
JMFS089A03+           TAAGTGGGTAGAGAGGCTGGTGAAGGATCCGGCGGTTGGCGCCGGCGGCAGTAGTGAGGG
JMFS019F05+           TAAGTGGGTAGAGAGGCTGGTGAAGGATCCGGCGGTTGGCGCCGGCGGCAGTAGTGAGGG
JMFS123H11+           TAAGTGGGTAGAGAGGCTGGTGAAGGATCCGGCGGTTGGCGCCGGCGGCAGTAGTGAGGG
JMFF046D02+           TAAGTGGGTAGAGAGGCTGGTGAAGGATCCGGCGGTTGGCGCCGGCGGCAGTAGTGAGGG
JMSF032C19+           TAAGTGGGTAGAGAGGCTGGTGAAGGATCCGGCGGTTGGCGCCGGCGGCAGTAGTGAGGG
                      ____________________________________________________________
consensus             TAAGTGGGTAGAGAGGCTGGTGAAGGATCCGGCGGTTGGCGCCGGCGGCAGTAGTGAGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS164A01+           GGTAAACTACCATTAAAATACTCATAAATACCATCCACATTACTACTCCAGAAGCCATAG
JMFS089A03+           GGTAAACTACCATTAAAATACTCATAAATACCATCCACATTACTACTCCAGAAGCCATAG
JMFS019F05+           GGTAAACTACCATTAAAATACTCATAAATACCATCCACATTACTACTCCAGAAGCCATAG
JMFS123H11+           GGTAAACTACCATTAAAATACTCATAAATACCATCCACATTACTACTCCAGAAGCCATAG
JMFF046D02+           GGTAAACTACCATTAAAATACTCATAAATACCATCCACATTACTACTCCAGAAGCCATAG
JMSF032C19+           GGTAAACTACCATTAAAATACTCATAAATACCATCCACATTACTACTCCAGAAGCCATAG
                      ____________________________________________________________
consensus             GGTAAACTACCATTAAAATACTCATAAATACCATCCACATTACTACTCCAGAAGCCATAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS164A01+           TGAT                                                        
JMFS089A03+           TGATTCTTGAGCAAAAGAAACGTGGGTTGAAGTTTGAAGTGAAGTAGCAATCAATGAGCA
JMFS019F05+           TGATTCTTGAGCAAAAGAAACGTGGGTTGAAGTTTGAAGTGAAGTAGCAATCAATGAGCA
JMFS123H11+           TGATTCTTGAGCAAAAGAAACGTGGGTTGAAGTTTGAAGTGAAGTAGCAATCAATGAGCA
JMFF046D02+           TGATTCTTGAGCAAAAGAAACGTGGGTTGAAGTTTGAAGTGAAGTAGCAATCAATGAGCA
JMSF032C19+           TGATTCTTGAGCAAAAGAAACGTGGGTTGAAGTTTGAAGTGAAGTAGCAATCAATGAGCA
                      ____________________________________________________________
consensus             TGATTCTTGAGCAAAAGAAACGTGGGTTGAAGTTTGAAGTGAAGTAGCAATCAATGAGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS089A03+           AAAATATGCTCTGTATTAAAAGTTTCAGAAACTAGGGAGAGACAAAG             
JMFS019F05+           AAAATATGCTCTGTATTAAAAGTTTCAGAAACTAGGGAGAGACAAAGGTAGCTACATTCA
JMFS123H11+           AAAATATGCTCTGTATTAAAAGTTTCAGAAACTAGGGAGAGACAAAGGTAGCTACATTCA
JMFF046D02+           AAAATATGCTCTGTATTAAAAGTTTCAGAAACTAGGGAGAGACAAAGGTAGCTACATTCA
JMSF032C19+           AAAATATGCTCTGTATTAAAAGTTTCAGAAACTAGGGAGAGACAAAGGTAGCTACATTCA
                      ____________________________________________________________
consensus             AAAATATGCTCTGTATTAAAAGTTTCAGAAACTAGGGAGAGACAAAGGTAGCTACATTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS019F05+           TTAATGGCAACTCAAGTTCACCATTGAAGGGTAGGTGGAGCTTTAGACTCCGGTGGCCAT
JMFS123H11+           TTAATGGCAACTCAAGTTCACCATTGAAGGGTAGGTGGAGCTTTAGACTCC         
JMFF046D02+           TTAATGGCAACTCAAGTTCACCATTGAAGGGTAGGTGGAGCTTTAGACTCCGGTGGCCAT
JMSF032C19+           TTAATGGCAACTCAAGTTCACCATTGAAGGGTAGGTGGAGCTTTAGACTCCGGTGGCCAT
                      ____________________________________________________________
consensus             TTAATGGCAACTCAAGTTCACCATTGAAGGGTAGGTGGAGCTTTAGACTCCGGTGGCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS019F05+           GGAGAAAAGGAA                                                
JMFF046D02+           GGAGAAAAGGAAAGCAGAGAGAGGAGG                                 
JMSF032C19+           GGAGAAAAGGAAAGCAGAGAGAGGAGGGAGGGAGGGAGGGAGATGAAGATGAGGTATTCC
                      ____________________________________________________________
consensus             GGAGAAAAGGAAAGCAGAGAGAGGAGGGAGGGAGGGAGGGAGATGAAGATGAGGTATTCC