clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF018K11 | Sequence | 505 | 002320 (4) | emb|CDP06790.1| | 3e-55 | unnamed protein product [Coffea canephora] | 729 | 009932 (4) | ref|XP_007030599.1| | 5e-61 | HXXXD-type acyl-transferase family protein, putative [Theobroma cacao] gb|EOY11 |
JMSF015K14 | Sequence | 230 | 002320 (4) | gb|EYU30520.1| | 1e-11 | hypothetical protein MIMGU_mgv1a006319mg [Erythranthe guttata] | 770 | 009932 (4) | ref|XP_007030599.1| | 1e-11 | HXXXD-type acyl-transferase family protein, putative [Theobroma cacao] gb|EOY11 |
JMSF032B13 | Sequence | 661 | 002320 (4) | emb|CDP06790.1| | 5e-45 | unnamed protein product [Coffea canephora] | 779 | 009932 (4) | ref|XP_006382783.1| | 3e-84 | hypothetical protein POPTR_0005s05380g [Populus trichocarpa] gb|ERP60580.1| hypo |
JMSF047F04 | Sequence | 671 | 002320 (4) | emb|CDP06790.1| | 9e-83 | unnamed protein product [Coffea canephora] | 687 | 009932 (4) | ref|XP_006382783.1| | 2e-69 | hypothetical protein POPTR_0005s05380g [Populus trichocarpa] gb|ERP60580.1| hypo |
This contig is upended
. : . : . : . : . : . :
JMSF047F04+ GAGGATTAACAATTGGCAAGCCTCT
____________________________________________________________
consensus GAGGATTAACAATTGGCAAGCCTCT
. : . : . : . : . : . :
JMSF047F04+ GTGATAATCTGCCCAACACTTGAAAAATAAGGTTGCACTTGTNGGATCTGCGTGCATGTG
____________________________________________________________
consensus GTGATAATCTGCCCAACACTTGAAAAATAAGGTTGCACTTGTNGGATCTGCGTGCATGTG
. : . : . : . : . : . :
JMSF047F04+ TGTAAAGCTCAGTCCAATAGNTAGTCCACCGCCTTCAAATTCATTTAGCTGGATTCGAAA
____________________________________________________________
consensus TGTAAAGCTCAGTCCAATAGNTAGTCCACCGCCTTCAAATTCATTTAGCTGGATTCGAAA
. : . : . : . : . : . :
JMSF047F04+ AGGAGACCAAATGGTAGGATCTTGTGGCATGTCTTCCCAGACCGTCAGATCCCGCTCNTC
JMFF018K11+ GTGGCATGTCTTCCCAGACCGTCAGATCCCGCTCCTC
JMSF032B13+ C
____________________________________________________________
consensus AGGAGACCAAATGGTAGGATCTTGTGGCATGTCTTCCCAGACCGTCAGATCCCGCTCCTC
. : . : . : . : . : . :
JMSF047F04+ TGACGCATCAGCCGATCTCAGCCACTCATCAAGCGTCACCCCTACCCTAGCCCTCACCAT
JMFF018K11+ TGACGCATCAGCCGATCTCAGCCACTCATCAAGCGTCACCCCTACCCTAGCCCTCACCAT
JMSF032B13+ TGACGCATCAGCCGATCTCAGCCACTCATCAAGCGTCACCCCTACCCTAGCCCTCACCAT
____________________________________________________________
consensus TGACGCATCAGCCGATCTCAGCCACTCATCAAGCGTCACCCCTACCCTAGCCCTCACCAT
. : . : . : . : . : . :
JMSF047F04+ CCTCATTCCCGCATCATTGCACTTCACTTCCCAGTTACCCTCCTCGTCCGGGCCCAGCCG
JMFF018K11+ CCTCATTCCCGCATCATTGCACTTCACTTCCCAGTTACCCTCCTCGTCCGGGCCCAGCCG
JMSF032B13+ CCTCATTCCCGCATCATTGCACTTCACTTCCCAGTTACCCTCCTCGTCCGGGCCCAGCCG
____________________________________________________________
consensus CCTCATTCCCGCATCATTGCACTTCACTTCCCAGTTACCCTCCTCGTCCGGGCCCAGCCG
. : . : . : . : . : . :
JMSF047F04+ CCCGGTCGCCGGCGGGTACTTGCAAAGGTGCTCNGACAGCGTCACCCGGAGATTATCCAA
JMSF015K14+ AA
JMFF018K11+ CCCGGTCGCCGGCGGGTACTTGCAAAGGTGCTCCGACAGCGTCACCCGGAGATTATCCAA
JMSF032B13+ CCCGGTCGCCGGCGGGTACTTGCAAAGGTGCTCCGACAGCGTCACCCGGAGATTATCCAA
____________________________________________________________
consensus CCCGGTCGCCGGCGGGTACTTGCAAAGGTGCTCCGACAGCGTCACCCGGAGATTATCCAA
. : . : . : . : . : . :
JMSF047F04+ GTACAACTCCATCGGACCTTCACGAAACGGGTTGACTCGGTAGTAGAAGATGATGTGGAT
JMSF015K14+ GTACAACTCCATCGGACCTTCACGAAACGGGTTGACTCGGTAGTAGAAGATGATGTGGAT
JMFF018K11+ GTACAACTCCATCGGACCTTCACGAAACGGGTTGACTCGGTAGTAGAAGATGATGTGGAT
JMSF032B13+ GTACAACTCCATCGGACCTTCACGAAACGGGTTGACTCGGTAGTAGAAGATGATGTGGAT
____________________________________________________________
consensus GTACAACTCCATCGGACCTTCACGAAACGGGTTGACTCGGTAGTAGAAGATGATGTGGAT
. : . : . : . : . : . :
JMSF047F04+ CGTGTGGAGACCCANGGCGTGGTCCATAGCGCTGAGCTTATGAACCTTATTGGGTTCAAT
JMSF015K14+ CGTGTGGAGACCCATGGCGTGGTCCATAGCGCTGAGCTTATGAACCTTATTGGGTTCAAT
JMFF018K11+ CGTGTGGAGACCCATGGCGTGGTCCATAGCGCTGAGCTTATGAACCTTATTGGGTTCAAT
JMSF032B13+ CGTGTGGAGACCCACGGCGTGGTCCATAGCGCTGAGCTTATGAACCTTATTGGGTTCAAT
____________________________________________________________
consensus CGTGTGGAGACCCATGGCGTGGTCCATAGCGCTGAGCTTATGAACCTTATTGGGTTCAAT
. : . : . : . : . : . :
JMSF047F04+ GGGTGTGCTTGACACCACCGTTAACATGGACTCAACTCTCACTCGGCTACCCTTCCCTTC
JMSF015K14+ GGGTGTGCTTGACACC-CCGTTAACATGGACTCAACTCTCACTCGGCTACCCTTCCCTTC
JMFF018K11+ GGGTGTGCTTGACACCACCGTTAACATGGACTCAACTCTCACTCGGNTACCCTTCCCTTC
JMSF032B13+ GGGTGTGCTTGACACCACCGTTAACATGGACTCAACTCTCACTCGGCTACCCTTCCCTTC
____________________________________________________________
consensus GGGTGTGCTTGACACCACCGTTAACATGGACTCAACTCTCACTCGGCTACCCTTCCCTTC
. : . : . : . : . : . :
JMSF047F04+ TTCCATTCTCAATAATATCAAACACTTTCACACCACACAACTTTGATTATATTGGCATGT
JMSF015K14+ TTCCATTCTCAATAATATCAAACACTTTCACATCACACAACTTTGATT
JMFF018K11+ TTCCATTCTCAATAATATCAAACACTTTCACACCACACAACTTTGATTATATTGGCATGT
JMSF032B13+ TTCCATTCTCAATAATATCAAACACTTTCACACCACACAACTTTGATTATATTGGCANGT
____________________________________________________________
consensus TTCCATTCTCAATAATATCAAACACTTTCACACCACACAACTTTGATTATATTGGCATGT
. : . : . : . : . : . :
JMSF047F04+ ATATATATATATATATATACTGCAATCATAGCTTTGCCAGTCTCT
JMFF018K11+ ATATATATATATATATATACTGCAATCATAGCTTTGCCAGTCTCT
JMSF032B13+ ATATATATATATATATATACTGCAATCATAGCTTTGCCAGTCTCTGCAATATGAAGAACG
____________________________________________________________
consensus ATATATATATATATATATACTGCAATCATAGCTTTGCCAGTCTCTGCAATATGAAGAACG
. : . : . : . : . : . :
JMSF032B13+ TATATGCCACGTAAATAAGATTATTAAAGATCAGAGGTGGGCAGATGGGGAAGGTGATAG
____________________________________________________________
consensus TATATGCCACGTAAATAAGATTATTAAAGATCAGAGGTGGGCAGATGGGGAAGGTGATAG
. : . : . : . : . : . :
JMSF032B13+ TTACATTAAAAGCATGAATCGTGATCTATTGGTGGGAGTTTGTTTTGATTTTTTTAATAC
____________________________________________________________
consensus TTACATTAAAAGCATGAATCGTGATCTATTGGTGGGAGTTTGTTTTGATTTTTTTAATAC
. : . : . : . : . : . :
JMSF032B13+ TCCCTAATGCTTGGGGTTCGTAGATCGGACATGTGTATCGAGAAACTAATTGAGTAGCCC
____________________________________________________________
consensus TCCCTAATGCTTGGGGTTCGTAGATCGGACATGTGTATCGAGAAACTAATTGAGTAGCCC