Contig 002301:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS012B02Sequence588002301 (4)ref|XP_004234406.1|3e-07PREDICTED: uncharacterized protein LOC101254456 isoform X1 [Solanum lycopersicu
JMFS109F11Sequence627002301 (4)ref|XP_009789214.1|1e-20PREDICTED: uncharacterized protein LOC104236874 isoform X1 [Nicotiana sylvestri
JMSF029J23Sequence676002301 (4)ref|XP_009789214.1|8e-22PREDICTED: uncharacterized protein LOC104236874 isoform X1 [Nicotiana sylvestri743010530 (4)ref|XP_009605982.1|270PREDICTED: uncharacterized protein LOC104100459 [Nicotiana tomentosiformis]
JMSF035B11Sequence700002301 (4)ref|XP_009605982.1|144PREDICTED: uncharacterized protein LOC104100459 [Nicotiana tomentosiformis]749010530 (4)ref|XP_006353869.1|2e-83PREDICTED: uncharacterized protein LOC102602745 isoform X2 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF035B11+ TTCTGCCGAAACTCCAGCATCAGGTGATTGAAATATGGCTTCAGTTGCAAATA
                      ____________________________________________________________
consensus TTCTGCCGAAACTCCAGCATCAGGTGATTGAAATATGGCTTCAGTTGCAAATA
 
. : . : . : . : . : . :
JMSF035B11+ AAGTGTTATCATTCACTGCCTCGCTGTTTTGATTGTCACTATCTTGCATTTCATTCTTGA
                      ____________________________________________________________
consensus AAGTGTTATCATTCACTGCCTCGCTGTTTTGATTGTCACTATCTTGCATTTCATTCTTGA
 
. : . : . : . : . : . :
JMSF035B11+ GGGCATCTTTTTCTAATTCAACTCTATCATTGTGATTATTATCACCCATGACTGACATTT
                      ____________________________________________________________
consensus GGGCATCTTTTTCTAATTCAACTCTATCATTGTGATTATTATCACCCATGACTGACATTT
 
. : . : . : . : . : . :
JMSF035B11+ CTTGTTGGGTTGTCAAAGGGTCCATATGCTGCTTCAATCTGGACATGCTGCGTTTGCTTA
JMFS109F11+ TGGACATGCTGCGTNTGCTTA
JMSF029J23+ CTGGACATGCTGCGTTTGCTTA
                      ____________________________________________________________
consensus CTTGTTGGGTTGTCAAAGGGTCCATATGCTGCTTCAATCTGGACATGCTGCGTTTGCTTA
 
. : . : . : . : . : . :
JMSF035B11+ TTGATAAAGCAGCAAAGATAATCCCAGCCACTAGGATAATGCTGGCTACTCCTGCTCCCA
JMFS109F11+ TTGATAAAGCAGCAAAGATAATCCCAGCCACTAGGATAATGCTGGCTACTCCTGCTCCCA
JMSF029J23+ TTGATAAAGCAGCAAAGATAATCCCAGCCACTAGGATAATGCTGGCTACTCCTGCTCCCA
                      ____________________________________________________________
consensus TTGATAAAGCAGCAAAGATAATCCCAGCCACTAGGATAATGCTGGCTACTCCTGCTCCCA
 
. : . : . : . : . : . :
JMSF035B11+ CAAGCCCTGCGACGGATTGCTTCTGCGGAGCCTCACTCGATGTTTCAGCTCCATCAGTTC
JMFS109F11+ CAAGCCCTGCGACGGATTGCTTCTGCGGAGCCTCACTCGATGTTTCAGCTCCATCAGTTC
JMFS012B02+ GATTGTTTCTGCGGAGCCTCACTTGATGTTTCAGCTCCATCAGTTC
JMSF029J23+ CAAGCCCTGCGACGGATTGCTTCTGCGGAGCCTCACTCGATGTTTCAGCTCCATCAGTTC
                      ____________________________________________________________
consensus CAAGCCCTGCGACGGATTGCTTCTGCGGAGCCTCACTCGATGTTTCAGCTCCATCAGTTC
 
. : . : . : . : . : . :
JMSF035B11+ CAGACCATCCAGCGAATCCATCCACTGGAGAAATGGAATTAACCAAAACACTGCGTCTTT
JMFS109F11+ CAGACCATCCAGCGAATCCATCCACTGGAGAAATGGAATTAACCAAAACACTGCGTCTTT
JMFS012B02+ CAGACCATCCAGCGAATCCATCCACTGGAGAAATCGAATTAACC-AAACACTGCACCTTT
JMSF029J23+ CAGACCATCCAGCGAATCCATCCACTGGAGAAATGGAATTAACCAAAACACTGCGTCTTT
                      ____________________________________________________________
consensus CAGACCATCCAGCGAATCCATCCACTGGAGAAATGGAATTAACCAAAACACTGCGTCTTT
 
. : . : . : . : . : . :
JMSF035B11+ CCAGCCAATTACGGTTTCTCGCGTGAGTATGCCCTCCAATAGAAAGTAAATGCTGCAGTC
JMFS109F11+ CCAGCCAATTAAGGTTTCTCGCGTGAGTATGCCCTACAATAGAAAGTAAATGCTGCAGTC
JMFS012B02+ CCAGCCAATTACGGTTTCTCGCGTGAGTATGCCCTCCAATAGAAAGTAAA---TGCAGTC
JMSF029J23+ CCAGCCAATTACGGTTTCTCGCGTGAGTATGCCCTCCAATAGAAAGTAAATGCTGCAGTC
                      ____________________________________________________________
consensus CCAGCCAATTACGGTTTCTCGCGTGAGTATGCCCTCCAATAGAAAGTAAATGCTGCAGTC
 
. : . : . : . : . : . :
JMSF035B11+ TATTGCAATCCTTCTTCCCAACACGCACCCGTAACAACACGGTTGACGGTTTTCTACAAT
JMFS109F11+ TATTGCAATCCTTCTTCCCAACACGCACCCGTAACAACACGGTTGACGGTTTTCTACAAT
JMFS012B02+ TATTGCAATCCTTCTTCCCAACACGCATCC-TACCAACACGGTTGACGATTTTTTACAAT
JMSF029J23+ TATTGCAATCCTTCTTCCCAACACGCACCCGTAACAACACGGTTGACGGTTTTCTACAAT
                      ____________________________________________________________
consensus TATTGCAATCCTTCTTCCCAACACGCACCCGTAACAACACGGTTGACGGTTTTCTACAAT
 
. : . : . : . : . : . :
JMSF035B11+ TGAAAGCTAATCGGAGGTGGAACGAGGTCGGGGACAATGTTGCAGTCAAAGAACTCATCT
JMFS109F11+ TGAAAGCTAATCGGAGGTGGAACGAGGTCGGGGACAATGTTGCAGTCAAAGAACTCATCT
JMFS012B02+ TGAAAGCTAATCGAAGCTGGAACGAGCTCGGGGACAATGTTGCAGTCAAAGAACTCATCT
JMSF029J23+ TGAAAGCTAATCGGAGGTGGAACGAGGTCGGGGACAATGTTGCAGTCAAAGAACTCATCT
                      ____________________________________________________________
consensus TGAAAGCTAATCGGAGGTGGAACGAGGTCGGGGACAATGTTGCAGTCAAAGAACTCATCT
 
. : . : . : . : . : . :
JMSF035B11+ CTGAATGGTCAAATTTGCAGTTGGGATAAATGCAAGATAGTTGCTAAAGTGGAGCTTTTC
JMFS109F11+ CTGAATGGTCAAATTTGCAGTTGGGATAAATGCAAGATAGTTGCTAAAGTGGAGCTTTTC
JMFS012B02+ CTGAATGGTCACATTTGCAGTAGGGATAAATGTAAGATAGTTGCTAAAGTGGAACTTTTC
JMSF029J23+ CTGAATGGTCAAATTTGCAGTTGGGATAAATGCAAGATAGTTGCTAAAGTGGAGCTTTTC
                      ____________________________________________________________
consensus CTGAATGGTCAAATTTGCAGTTGGGATAAATGCAAGATAGTTGCTAAAGTGGAGCTTTTC
 
. : . : . : . : . : . :
JMSF035B11+ AGTACAGAAGAGCATCAAAATGCGTCTCTCC
JMFS109F11+ AGTACAGAAGAGCATCAAAATGCGTCTCTCCCACTCGTGCACACATGTATAAGATATAGA
JMFS012B02+ AGTACAGAAGAACATCAAAATGCGTCTCT-CCACTCTTGCACACATGTATAAGATATA
JMSF029J23+ AGTACAGAAGAGCATCAAAATGCGTCTCTCCCACTCGTGCACACATGTATAAGATATAGA
                      ____________________________________________________________
consensus AGTACAGAAGAGCATCAAAATGCGTCTCTCCCACTCGTGCACACATGTATAAGATATAGA
 
. : . : . : . : . : . :
JMFS109F11+ GAATGTTTGAAGTAAAATTCTAGGGTTTTTCTTGTCTGTATCGTGTTATGGTGAACGACC
JMSF029J23+ GAATGTTTGAAGTAAAATTCTAGGGTTTTTCTTGTCTGTATCGTGTTATGGTGAACGACC
                      ____________________________________________________________
consensus GAATGTTTGAAGTAAAATTCTAGGGTTTTTCTTGTCTGTATCGTGTTATGGTGAACGACC
 
. : . : . : . : . : . :
JMFS109F11+ TATGCATCTCTCTCTCTCTCTCTTACTATGATTAAACCTA
JMSF029J23+ TATGCATCTCTCTCTCTCTCTCTTACTATGATTAAACCTACGTGCAAAACTGCAAATACC
                      ____________________________________________________________
consensus TATGCATCTCTCTCTCTCTCTCTTACTATGATTAAACCTACGTGCAAAACTGCAAATACC